Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02812 ATCTCCAACTCAACCCAATTCGCGTAGGAAATTGAAAGGGAAGAACAAAAAGGAAGAGCTAATTCGATTCTCTCCCCTTCATAATTTGCGAAAAGATCTTGAAGCAATTTTGATTTTGCATCTTCGAAATTGTTGGGAGTTCGATATTTTGATGTCTTTTACGACAAGTGAAGTTTTCTTCTCGTTCGTGGAGTGAATCTGAGTTCAATTTTGGGGATTTGATCTGATTCTTTGATCTGCAGCCTTGCTGGTAGTGTAATTGCAAGCGGAAGTTGCGATGGCAATAGACCAGGCCGAGCTTAGCACTGAGCAGGTTCTTACAAGGGATATTCCATGGGAGACATACATGACTACTAAACTTATCAGTGGAACAAGCCTTCAGCTGTTAAGGCGTTATGACAATAGACCAGAGAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCGGCATATGTTCGGGTATTTGTTAGCATTTTACGCGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATTGACGAAATGCTTACAGCAAACCCTAAAAGAGCAAGATTGTTCCATGATCCTTCTCTTGCAAGCGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGAAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCTCTGATAGTGAGTGCTAGATCAAAAACTCATGATGGAAGTTTTGCAAATGGTGATGCCTCAAACTCCAAGAACAAAATTACTACCATCGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCACAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTACGGACTTCTATCAATTGCTTTGCAACTCTGCTGAAGGAACCAAAGGTCAGATCCTCCTTCGTCCAGGCAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCGACCCAACAATCTATTCAGCTTCTATATGAAACTTGTCTTTGTGTTTGGCTCTTATCATATTATGAGCCGGCAATTGAATTCTTGGCCACTTCTAGGACCCTTCCAAGACTCATCGATGTTGTCAAGAGTTCCACAAAAGAGAAGGTTGTCCGAGTTATTATTTTGACCTTGAGGAACTTACTCTACAAGGGGACATTTGGAGCTCAAATGGTGAGTCTCGGACTGCCACAAGTTGTTCAAAGTTTGAAATCACAAGCATGGAGTGATGAGGACCTTTTGGAGGCTTTGAATCAACTAGAAGAGGGGTTGAAAGATAACATCAAGAAACTAAGTTCTTTCGACAAGTATAAGCAAGAAGTCCTTCTCGGGCATCTTGACTGGTCTCCTATGCACAAAGATGTAAATTTCTGGCGAGAAAATATTACAAGCTTCGAAGAGAATGACTTGAAGATATTGAGGGTCCTAATCACAATTCTGGACAGTTCCAGTGATCCAAGGGCTTTGGCAGTTGCCTGTTTTGATCTTTCACAGTTCATTCAACACCATCCAGCTGGGAGAGTTATAGTGACAGACCTTAAGGCCAAGGAAAGAGTGATGAAACTGATGAATCATGAGAACGCTGAGGTTACTAAATATGCCCTCCTTTGCATTCAAAGGCTCTTTCTAGGTGCCAAGTATGCTAGCTTTCTCCAGGCTTAACTCGGTTCTCTCTCCATTTGTGTAAGTTATAATAAATCCATCCTACTTAAACACCTCAGTTGCTGAAGCTAAAAGGGTTTTTATTACTTTCATCAAGTAATTATCTTCTTAAATTTTTGGTGTGAATCAACAGAGATTTTATTCGTTTCTTTGCATTCCCAGAATGTTATTTGGGCATATTGAATAAAGTCACCAGGTTTTCATACCTTGTATTTTACCTTTTGATGTCTATTGATTTGAAACTGAAGAGAGATCTGACTCTGAGATAATGAGTTGAAAGCAAGTAAAAAGAACTTTTAATTTTCTTTTCCTC 1955 39.9 MAIDQAELSTEQVLTRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDPSLASEDAYEPFLRLLWKGNWFIQEKSCKILALIVSARSKTHDGSFANGDASNSKNKITTIDDVLDGLVKWLCAQLKNPSHPSRAVRTSINCFATLLKEPKVRSSFVQADGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVIILTLRNLLYKGTFGAQMVSLGLPQVVQSLKSQAWSDEDLLEALNQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDLKILRVLITILDSSSDPRALAVACFDLSQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA 454
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 75429744 75438147 + XM_039049556.1 Bhi11g02812 51524

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02812 454 Pfam V-ATPase subunit H 6 325 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bhi11g02812 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037
Bhi11g02812 454 PIRSF V-ATP_synth_H 2 453 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bhi11g02812 454 CDD VATPase_H 4 448 - -
Bhi11g02812 454 Gene3D - 6 333 IPR011989 -
Bhi11g02812 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 3 454 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bhi11g02812 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 3 454 - -
Bhi11g02812 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221|GO:1902600
Bhi11g02812 454 Gene3D - 345 446 IPR038497 -
Bhi11g02812 454 SUPERFAMILY ARM repeat 10 444 IPR016024 -
Bhi11g02812 454 SMART arm_5 404 444 IPR000225 GO:0005515
Bhi11g02812 454 SMART arm_5 243 284 IPR000225 GO:0005515
Bhi11g02812 454 SMART arm_5 198 242 IPR000225 GO:0005515
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02812 K02144 ATPeV1H; V-type H+-transporting ATPase subunit H - csv:101217015 874.389
       

Dupl-types


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02811 Bhi-Chr11:75429717 Bhi11g02812 Bhi-Chr11:75429744 0 tandem
Bhi11g02812 Bhi-Chr11:75429744 Bhi11g02813 Bhi-Chr11:75432216 0 tandem
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi04g00444 . 1 998 Primary Pumps ATPases(2) AT1G10130 82.4 0.0e+00 1616.3
Bhi04g00445 . 1 870 Primary Pumps ATPases(2) AT1G10130 82.3 0.0e+00 1410.2
Bhi10g00598 . 1 814 Primary Pumps ATPases(2) AT2G28520 81.0 0.0e+00 1338.9
Bhi04g00220 . 1 803 Primary Pumps ATPases(2) AT2G28520 63.4 1.8e-297 1019.2
Bhi05g01790 . 10 813 Primary Pumps ATPases(2) AT2G28520 62.8 1.0e-292 1003.4
Bhi04g00218 . 1 775 Primary Pumps ATPases(2) AT2G28520 61.2 3.4e-283 971.8
Bhi04g00219 . 1 783 Primary Pumps ATPases(2) AT2G28520 61.1 9.8e-283 970.3
Bhi05g01790 . 6 818 Primary Pumps ATPases(2) AT2G21410 76.0 0.0e+00 1234.9
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT2G21410 74.0 0.0e+00 1204.9
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT2G21410 71.7 0.0e+00 1156.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT2G21410 71.8 0.0e+00 1154.4
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT2G21410 62.3 1.3e-298 1023.1
Bhi05g01790 . 8 818 Primary Pumps ATPases(2) AT4G39080 77.2 0.0e+00 1238.0
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT4G39080 74.3 0.0e+00 1198.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT4G39080 72.1 0.0e+00 1150.6
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT4G39080 71.8 0.0e+00 1147.5
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT4G39080 63.4 2.4e-297 1018.8
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi04g00232 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi04g00233 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi09g02673 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.9e-66 248.4
Bhi04g00232 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g00233 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 8.4e-53 203.8
Bhi04g00232 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g00233 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g01015 . 6 180 Primary Pumps ATPases(2) AT2G25610 85.1 6.3e-70 261.5
Bhi09g02278 . 4 180 Primary Pumps ATPases(2) AT2G25610 81.4 3.1e-69 259.2
Bhi09g02277 . 4 198 Primary Pumps ATPases(2) AT2G25610 73.8 7.2e-66 248.1
Bhi09g02279 . 4 137 Primary Pumps ATPases(2) AT2G25610 71.6 8.0e-41 164.9
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g01015 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 8.1e-72 267.7
Bhi09g02278 . 11 180 Primary Pumps ATPases(2) AT4G32530 76.5 8.1e-72 267.7
Bhi09g02277 . 11 198 Primary Pumps ATPases(2) AT4G32530 70.2 1.9e-68 256.5
Bhi09g02279 . 11 142 Primary Pumps ATPases(2) AT4G32530 75.0 1.8e-42 170.2
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.3 0.0e+00 1664.4
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.3 0.0e+00 1668.7
Bhi04g00444 . 1 998 Primary Pumps ATPases(2) AT1G10130 82.4 0.0e+00 1616.3
Bhi04g00445 . 1 870 Primary Pumps ATPases(2) AT1G10130 82.3 0.0e+00 1410.2
Bhi08g00646 . 22 1046 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1315.1
Bhi02g02086 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.9 2.0e-57 219.2
Bhi05g01683 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi05g01684 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi11g02100 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02099 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02098 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi12g01185 . 1 376 Primary Pumps ATPases(2) AT1G12840 83.8 4.5e-182 634.8
Bhi05g02069 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi05g02068 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi11g02811 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02812 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02813 . 1 369 Primary Pumps ATPases(2) AT3G42050 79.4 2.0e-168 589.7
Bhi04g00232 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g00233 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi05g01683 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01684 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01683 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi05g01684 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi10g00598 . 1 814 Primary Pumps ATPases(2) AT2G28520 81.0 0.0e+00 1338.9
Bhi04g00220 . 1 803 Primary Pumps ATPases(2) AT2G28520 63.4 1.8e-297 1019.2
Bhi05g01790 . 10 813 Primary Pumps ATPases(2) AT2G28520 62.8 1.0e-292 1003.4
Bhi04g00218 . 1 775 Primary Pumps ATPases(2) AT2G28520 61.2 3.4e-283 971.8
Bhi04g00219 . 1 783 Primary Pumps ATPases(2) AT2G28520 61.1 9.8e-283 970.3
Bhi11g03018 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 9.8e-192 666.8
Bhi09g00220 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.3 0.0e+00 1171.0
Bhi05g01683 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi05g01684 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi05g01683 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01684 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01683 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi05g01684 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi12g01185 . 1 376 Primary Pumps ATPases(2) AT1G12840 83.8 4.5e-182 634.8
Bhi05g02069 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi05g02068 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi02g02086 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.9 2.0e-57 219.2
Bhi11g02100 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02099 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02098 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02811 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02812 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02813 . 1 369 Primary Pumps ATPases(2) AT3G42050 79.4 2.0e-168 589.7
Bhi10g00598 . 1 814 Primary Pumps ATPases(2) AT2G28520 81.0 0.0e+00 1338.9
Bhi04g00220 . 1 803 Primary Pumps ATPases(2) AT2G28520 63.4 1.8e-297 1019.2
Bhi05g01790 . 10 813 Primary Pumps ATPases(2) AT2G28520 62.8 1.0e-292 1003.4
Bhi04g00218 . 1 775 Primary Pumps ATPases(2) AT2G28520 61.2 3.4e-283 971.8
Bhi04g00219 . 1 783 Primary Pumps ATPases(2) AT2G28520 61.1 9.8e-283 970.3
Bhi05g01790 . 6 818 Primary Pumps ATPases(2) AT2G21410 76.0 0.0e+00 1234.9
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT2G21410 74.0 0.0e+00 1204.9
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT2G21410 71.7 0.0e+00 1156.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT2G21410 71.8 0.0e+00 1154.4
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT2G21410 62.3 1.3e-298 1023.1
Bhi05g01790 . 8 818 Primary Pumps ATPases(2) AT4G39080 77.2 0.0e+00 1238.0
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT4G39080 74.3 0.0e+00 1198.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT4G39080 72.1 0.0e+00 1150.6
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT4G39080 71.8 0.0e+00 1147.5
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT4G39080 63.4 2.4e-297 1018.8
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi09g02673 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 8.4e-53 203.8
Bhi04g00232 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g00233 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g00232 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi04g00233 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi09g02673 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.9e-66 248.4
Bhi04g00232 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g00233 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g01015 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 8.1e-72 267.7
Bhi09g02278 . 11 180 Primary Pumps ATPases(2) AT4G32530 76.5 8.1e-72 267.7
Bhi09g02277 . 11 198 Primary Pumps ATPases(2) AT4G32530 70.2 1.9e-68 256.5
Bhi09g02279 . 11 142 Primary Pumps ATPases(2) AT4G32530 75.0 1.8e-42 170.2
Bhi04g01015 . 6 180 Primary Pumps ATPases(2) AT2G25610 85.1 6.3e-70 261.5
Bhi09g02278 . 4 180 Primary Pumps ATPases(2) AT2G25610 81.4 3.1e-69 259.2
Bhi09g02277 . 4 198 Primary Pumps ATPases(2) AT2G25610 73.8 7.2e-66 248.1
Bhi09g02279 . 4 137 Primary Pumps ATPases(2) AT2G25610 71.6 8.0e-41 164.9
Bhi11g03018 . 1 351 Primary Pumps ATPases(2) AT3G28710 94.3 8.5e-199 690.3
Bhi11g03018 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 9.8e-192 666.8
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.3 0.0e+00 1664.4
Bhi08g00646 . 22 1046 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1315.1
Bhi04g00444 . 1 998 Primary Pumps ATPases(2) AT1G10130 82.4 0.0e+00 1616.3
Bhi04g00445 . 1 870 Primary Pumps ATPases(2) AT1G10130 82.3 0.0e+00 1410.2
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.3 0.0e+00 1668.7
       

Syn-Orthogroups


Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003959 2 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 2 1 1 1 1 3 3 1 43