Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02893 CATGGGAAAGGCAATAGTAGACCTAGGTAATGTGTGTGAAAAGGGGTATGTCCATGCCGCCCGAAAGCCGACTCCGCCGCCGTTCTTGGCCAAAACCTACATGCTTGTTGAGGATCCGATGACCGACGACGTAATATCGTGGAATTCCGATGGAACGGCGTTCATCGTGTGGCGGCCATCAGAGTTCGCAACAGATCTCCTCCCCACCCTCTTCAAACACAACAACTTCTCTAGCTTTGTTCGCCAACTTAACACATACGGATTTCGTAAGATTGCAACAAGCAGATGGGAGTTTTGCAATGACAAGTTTCAAAAGGGATGTAAAGAAAGACTGTGCGAAATACGCAGGAGAAAAGCATGGAGCAACAAGCGAAAACACAGTAACAATGCAAAAGTGATCCAAGTCACACATCAAGACGATCACAATGAAGATCAACGGTCACCGTCGACATCATCATCGTCTGATGATCAGTACACGACGCTTGTTGATGAAAACAAGAGGTTGAAGAAGGAGAATGGAGTGTTAAGCTTTGAGCTAACAAACATGAAGAAGAAATGCAGAGAGCTTCTTGATTTGGTGGCTTGGTACGAATTCGCCATCATTAATGGCAACGAAAAGGAGGGAGATGATATATTGAGGAAGCCAAACATGAAACTCTTTGGAGTCAAGTTGGAGGTTGAAGAAGAAGATGAAATGGTGAGGCAAAACAAGAGAAAGAGATCGATTTATCAAAATAAACCTTTTCCACTCTCACAATCATGCAAATGA 769 44.08 MGKAIVDLGNVCEKGYVHAARKPTPPPFLAKTYMLVEDPMTDDVISWNSDGTAFIVWRPSEFATDLLPTLFKHNNFSSFVRQLNTYGFRKIATSRWEFCNDKFQKGCKERLCEIRRRKAWSNKRKHSNNAKVIQVTHQDDHNEDQRSPSTSSSSDDQYTTLVDENKRLKKENGVLSFELTNMKKKCRELLDLVAWYEFAIINGNEKEGDDILRKPNMKLFGVKLEVEEEDEMVRQNKRKRSIYQNKPFPLSQSCK 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 77886862 77889776 - XM_039050407.1 Bhi11g02893 51605

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02893 255 MobiDBLite consensus disorder prediction 123 158 - -
Bhi11g02893 255 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi11g02893 255 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi11g02893 255 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi11g02893 255 MobiDBLite consensus disorder prediction 230 255 - -
Bhi11g02893 255 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi11g02893 255 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bhi11g02893 255 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 255 IPR027725 -
Bhi11g02893 255 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 12 255 - -
Bhi11g02893 255 Gene3D - 20 118 IPR036388 -
Bhi11g02893 255 SUPERFAMILY Winged helix DNA-binding domain 24 117 IPR036390 -
Bhi11g02893 255 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02893 K09419 HSFF; heat shock transcription factor, other eukaryote - csv:101216546 401.749
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi03g02582 Bhi11g02893 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02582 Bhi-Chr3:62213639 Bhi11g02893 Bhi-Chr11:77886862 7.60E-86 dispersed
Bhi11g02893 Bhi-Chr11:77886862 Bhi12g00211 Bhi-Chr12:6830332 8.53E-51 dispersed
Bhi11g02893 Bhi-Chr11:77886862 Bhi12g00210 Bhi-Chr12:6830332 8.53E-51 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi8g1462 . Blo12g00576 . . . . . . . . Cma03g00056 . Car03g00046 . Sed02g0844 Cpe10g01200 . Bhi03g02582 Tan03g0376 Cmetu04g0111 . Hepe04g0401 . . Cla04g00354 Cam04g0366 Cec04g0460 Cco04g0481 Clacu04g0365 Cmu04g0415 Cre04g0452 Cone3ag0046 Cone10ag0035 . . . . . Cme04g02057 . . . . . . . . . Cmo03g00056 . . . . . . . Bhi11g02893 . . . . . . Cla10g01503 Cam10g1552 Cec10g1593 Cco10g1566 Clacu10g1561 Cmu10g2324 Cre10g1708 Lsi03g01558 Csa03g03764 Chy04g01608 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi01g00760 . 6 238 HSF AT4G17750 54.1 3.6e-62 236.9
Bhi04g00527 . 47 247 HSF AT4G17750 54.6 3.7e-59 226.9
Bhi05g00305 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi05g00304 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi09g01104 . 61 304 HSF AT4G17750 50.2 1.9e-58 224.6
Bhi06g01635 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi06g01634 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi08g02149 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi08g02150 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi04g00361 CCT 20 118 HSF AT4G17750 71.7 9.6e-39 159.1
Bhi09g03307 CCT 20 118 HSF AT4G17750 69.7 3.6e-38 157.1
Bhi12g00210 CCT 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi12g00211 . 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi05g00305 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi05g00304 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi01g00760 . 40 243 HSF AT5G16820 56.8 2.1e-59 227.6
Bhi09g01104 . 62 276 HSF AT5G16820 54.6 8.4e-56 215.7
Bhi04g00527 . 48 258 HSF AT5G16820 51.1 1.1e-55 215.3
Bhi06g01635 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi06g01634 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi02g01124 CCT 10 176 HSF AT5G16820 51.1 9.0e-42 169.1
Bhi11g00015 . 13 515 HSF AT1G32330 53.2 2.0e-121 433.7
Bhi01g00760 . 10 228 HSF AT1G32330 50.9 8.1e-59 225.7
Bhi05g00305 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi05g00304 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi09g01104 . 50 272 HSF AT1G32330 51.8 9.0e-58 222.2
Bhi04g00527 . 36 228 HSF AT1G32330 54.6 2.2e-56 217.6
Bhi04g00361 CCT 20 117 HSF AT1G32330 71.4 6.0e-38 156.4
Bhi09g03307 CCT 22 117 HSF AT1G32330 71.9 1.8e-37 154.8
Bhi05g00305 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi05g00304 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi01g00760 . 40 242 HSF AT3G02990 56.0 2.1e-59 227.6
Bhi09g01104 . 62 287 HSF AT3G02990 52.6 3.9e-58 223.4
Bhi04g00527 . 48 247 HSF AT3G02990 51.7 4.8e-56 216.5
Bhi02g01124 CCT 10 172 HSF AT3G02990 50.3 1.3e-40 165.2
Bhi04g00527 . 36 368 HSF AT2G26150 50.3 1.3e-87 320.9
Bhi01g00760 . 7 238 HSF AT2G26150 55.0 5.8e-67 252.3
Bhi09g01104 . 50 271 HSF AT2G26150 54.7 7.1e-65 245.4
Bhi11g00015 . 8 243 HSF AT2G26150 55.7 4.7e-61 232.6
Bhi06g01635 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi06g01634 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi11g01977 . 116 359 HSF AT5G03720 59.3 9.0e-75 278.5
Bhi10g01040 . 2 188 HSF AT4G18880 50.5 1.4e-48 191.4
Bhi01g00185 . 3 462 HSF AT4G13980 51.8 2.5e-113 406.8
Bhi01g00760 . 27 219 HSF AT5G43840 53.9 9.3e-55 211.5
Bhi04g00527 . 36 225 HSF AT5G43840 52.6 1.2e-46 184.5
Bhi01g00760 . 22 324 HSF AT3G22830 52.6 1.4e-88 324.3
Bhi05g00305 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi05g00304 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi04g00527 . 36 228 HSF AT3G22830 59.1 6.4e-65 245.7
Bhi11g00015 . 29 242 HSF AT3G22830 58.9 1.3e-62 238.0
Bhi05g00305 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi05g00304 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi01g00760 . 27 239 HSF AT3G51910 57.0 1.2e-59 227.6
Bhi04g00527 . 36 228 HSF AT3G51910 56.5 6.8e-55 211.8
Bhi05g00305 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi05g00304 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi01g00760 . 12 228 HSF AT3G63350 52.2 3.2e-55 213.0
Bhi04g00527 . 36 235 HSF AT3G63350 51.0 9.0e-50 194.9
Bhi10g01040 . 5 139 HSF AT3G63350 57.9 3.9e-37 152.9
Bhi03g01845 CCT 2 296 HSF AT4G36990 52.0 5.8e-73 271.9
Bhi12g00210 CCT 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00211 . 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00210 CCT 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi12g00211 . 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi09g03307 CCT 16 119 HSF AT4G11660 74.0 2.0e-44 177.6
Bhi04g00361 CCT 16 121 HSF AT4G11660 71.7 2.6e-44 177.2
Bhi03g01845 CCT 2 107 HSF AT4G11660 72.6 8.3e-43 172.2
Bhi11g00015 . 33 126 HSF AT4G11660 69.1 2.6e-36 150.6
Bhi11g02893 CCT 20 118 HSF AT4G11660 67.7 3.4e-36 150.2
Bhi03g02582 CCT 9 209 HSF AT2G41690 54.3 4.6e-50 195.7
Bhi11g02893 CCT 25 225 HSF AT2G41690 51.7 1.9e-48 190.3
Bhi04g00361 CCT 19 376 HSF AT1G46264 51.8 2.5e-86 316.6
Bhi09g03307 CCT 1 352 HSF AT1G46264 51.7 3.1e-84 309.7
Bhi03g01845 CCT 4 198 HSF AT1G46264 50.7 9.4e-49 191.8
Bhi11g00015 . 33 138 HSF AT1G46264 73.6 5.5e-41 166.0
Bhi10g01040 . 5 114 HSF AT1G46264 65.5 7.4e-38 155.6
Bhi01g00760 . 30 142 HSF AT1G46264 61.1 1.7e-37 154.5
Bhi05g00305 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
Bhi05g00304 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
Bhi01g00760 . 6 238 HSF AT4G17750 54.1 3.6e-62 236.9
Bhi04g00527 . 47 247 HSF AT4G17750 54.6 3.7e-59 226.9
Bhi05g00305 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi05g00304 . 41 243 HSF AT4G17750 55.3 3.7e-59 226.9
Bhi09g01104 . 61 304 HSF AT4G17750 50.2 1.9e-58 224.6
Bhi06g01635 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi06g01634 . 66 259 HSF AT4G17750 51.0 5.1e-48 189.9
Bhi08g02149 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi08g02150 . 13 191 HSF AT4G17750 50.8 8.9e-45 179.1
Bhi04g00361 CCT 20 118 HSF AT4G17750 71.7 9.6e-39 159.1
Bhi09g03307 CCT 20 118 HSF AT4G17750 69.7 3.6e-38 157.1
Bhi12g00210 CCT 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi12g00211 . 20 115 HSF AT4G17750 70.8 1.2e-36 152.1
Bhi05g00305 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi05g00304 . 42 263 HSF AT5G16820 52.0 1.2e-59 228.4
Bhi01g00760 . 40 243 HSF AT5G16820 56.8 2.1e-59 227.6
Bhi09g01104 . 62 276 HSF AT5G16820 54.6 8.4e-56 215.7
Bhi04g00527 . 48 258 HSF AT5G16820 51.1 1.1e-55 215.3
Bhi06g01635 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi06g01634 . 68 259 HSF AT5G16820 52.6 4.2e-47 186.8
Bhi02g01124 CCT 10 176 HSF AT5G16820 51.1 9.0e-42 169.1
Bhi11g00015 . 13 515 HSF AT1G32330 53.2 2.0e-121 433.7
Bhi01g00760 . 10 228 HSF AT1G32330 50.9 8.1e-59 225.7
Bhi05g00305 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi05g00304 . 20 227 HSF AT1G32330 53.2 1.4e-58 224.9
Bhi09g01104 . 50 272 HSF AT1G32330 51.8 9.0e-58 222.2
Bhi04g00527 . 36 228 HSF AT1G32330 54.6 2.2e-56 217.6
Bhi04g00361 CCT 20 117 HSF AT1G32330 71.4 6.0e-38 156.4
Bhi09g03307 CCT 22 117 HSF AT1G32330 71.9 1.8e-37 154.8
Bhi05g00305 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi05g00304 . 42 263 HSF AT3G02990 51.7 3.8e-61 233.4
Bhi01g00760 . 40 242 HSF AT3G02990 56.0 2.1e-59 227.6
Bhi09g01104 . 62 287 HSF AT3G02990 52.6 3.9e-58 223.4
Bhi04g00527 . 48 247 HSF AT3G02990 51.7 4.8e-56 216.5
Bhi02g01124 CCT 10 172 HSF AT3G02990 50.3 1.3e-40 165.2
Bhi04g00527 . 36 368 HSF AT2G26150 50.3 1.3e-87 320.9
Bhi01g00760 . 7 238 HSF AT2G26150 55.0 5.8e-67 252.3
Bhi09g01104 . 50 271 HSF AT2G26150 54.7 7.1e-65 245.4
Bhi11g00015 . 8 243 HSF AT2G26150 55.7 4.7e-61 232.6
Bhi06g01635 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi06g01634 . 56 278 HSF AT2G26150 52.0 5.1e-55 212.6
Bhi11g01977 . 116 359 HSF AT5G03720 59.3 9.0e-75 278.5
Bhi10g01040 . 2 188 HSF AT4G18880 50.5 1.4e-48 191.4
Bhi01g00185 . 3 462 HSF AT4G13980 51.8 2.5e-113 406.8
Bhi01g00760 . 27 219 HSF AT5G43840 53.9 9.3e-55 211.5
Bhi04g00527 . 36 225 HSF AT5G43840 52.6 1.2e-46 184.5
Bhi01g00760 . 22 324 HSF AT3G22830 52.6 1.4e-88 324.3
Bhi05g00305 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi05g00304 . 27 349 HSF AT3G22830 51.8 1.2e-87 321.2
Bhi04g00527 . 36 228 HSF AT3G22830 59.1 6.4e-65 245.7
Bhi11g00015 . 29 242 HSF AT3G22830 58.9 1.3e-62 238.0
Bhi05g00305 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi05g00304 . 29 322 HSF AT3G51910 54.1 1.1e-71 267.7
Bhi01g00760 . 27 239 HSF AT3G51910 57.0 1.2e-59 227.6
Bhi04g00527 . 36 228 HSF AT3G51910 56.5 6.8e-55 211.8
Bhi05g00305 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi05g00304 . 29 333 HSF AT3G63350 50.2 1.3e-69 260.8
Bhi01g00760 . 12 228 HSF AT3G63350 52.2 3.2e-55 213.0
Bhi04g00527 . 36 235 HSF AT3G63350 51.0 9.0e-50 194.9
Bhi10g01040 . 5 139 HSF AT3G63350 57.9 3.9e-37 152.9
Bhi03g01845 CCT 2 296 HSF AT4G36990 52.0 5.8e-73 271.9
Bhi12g00210 CCT 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00211 . 12 300 HSF AT5G62020 50.7 1.5e-58 224.2
Bhi12g00210 CCT 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi12g00211 . 16 336 HSF AT4G11660 56.8 1.0e-80 298.1
Bhi09g03307 CCT 16 119 HSF AT4G11660 74.0 2.0e-44 177.6
Bhi04g00361 CCT 16 121 HSF AT4G11660 71.7 2.6e-44 177.2
Bhi03g01845 CCT 2 107 HSF AT4G11660 72.6 8.3e-43 172.2
Bhi11g00015 . 33 126 HSF AT4G11660 69.1 2.6e-36 150.6
Bhi11g02893 CCT 20 118 HSF AT4G11660 67.7 3.4e-36 150.2
Bhi03g02582 CCT 9 209 HSF AT2G41690 54.3 4.6e-50 195.7
Bhi11g02893 CCT 25 225 HSF AT2G41690 51.7 1.9e-48 190.3
Bhi04g00361 CCT 19 376 HSF AT1G46264 51.8 2.5e-86 316.6
Bhi09g03307 CCT 1 352 HSF AT1G46264 51.7 3.1e-84 309.7
Bhi03g01845 CCT 4 198 HSF AT1G46264 50.7 9.4e-49 191.8
Bhi11g00015 . 33 138 HSF AT1G46264 73.6 5.5e-41 166.0
Bhi10g01040 . 5 114 HSF AT1G46264 65.5 7.4e-38 155.6
Bhi01g00760 . 30 142 HSF AT1G46264 61.1 1.7e-37 154.5
Bhi05g00305 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
Bhi05g00304 . 33 147 HSF AT1G46264 60.0 6.3e-37 152.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003188 2 2 1 0 0 2 2 2 2 2 2 2 1 2 2 2 2 2 1 2 2 1 2 2 2 3 1 1 2 1 50
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2542 PF00447 HSF_DNA-bind 3.20E-31 CL0123 Bhi TF