Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02902 TTTTTTAATCTTTATAAACCTCACTCCCCACCCCAGACCCTTCTAGACAACACTCAAATACAGAGATAATGGAAGTTCTAAGAAGGGTCGACGGTGGTGGGCTTCTGGTGGCGGTGGCGGTGGTGGTATTGCTGGCGGCGGTGCCGGAAGTTTCGGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACAACTAATGTGAACTACACTATTTGGGCTCAGGATAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAAGTGAACAAGACAGACTATGAGAATTGCATTTCTGATCATCCACTCCACAATTTCACCACAGGAGCTGGAAGAGATGTCGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAACTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCAAGCTCGCCCTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTAGCCACACCCCATTCATTTTAACCGCTGTTTTCGCCATCACTGCTCTGTACGAAGCTTTCGCCCGGCTCTGGTAGAGACCAGTGTTATTGATTCATATTCAATAGAGTACATTTTTCTTCACCAAATTGTGGAAGGAAGTTCAACTTATTAATTCTCTTCTTTCTTTTTTTGAGGGTGTTGGTGTCTCTTTTGTGTCATCTTTTGCTTTCCCTTTGATTTAGACTTCAATATTCAAAATAGATATTTTTTTTCTTTTTTCAATTTAATTTAAAATTTGGCAGTGTTCTTGTTTGGGTGGTGGATATTTGAATTTTGATAACACTCTTTAAGTTATTTTGTCCACTTAAATGGGTTTTACAAGCAA 892 42.04 MEVLRRVDGGGLLVAVAVVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQDKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYISHTPFILTAVFAITALYEAFARLW 177
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 78591152 78592886 + XM_039047461.1 Bhi11g02902 51614

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02902 177 Pfam Plastocyanin-like domain 41 123 IPR003245 GO:0009055
Bhi11g02902 177 PANTHER BLUE COPPER PROTEIN 13 169 IPR039391 GO:0009055
Bhi11g02902 177 Gene3D - 29 132 IPR008972 -
Bhi11g02902 177 ProSiteProfiles Phytocyanin domain profile. 31 131 IPR003245 GO:0009055
Bhi11g02902 177 PANTHER LAMIN-LIKE PROTEIN 13 169 - -
Bhi11g02902 177 SUPERFAMILY Cupredoxins 30 129 IPR008972 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02902 - - - csv:101210415 298.516
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01667 Bhi-Chr2:45858557 Bhi11g02902 Bhi-Chr11:78591152 1.98E-29 dispersed
Bhi11g01454 Bhi-Chr11:42220505 Bhi11g02902 Bhi-Chr11:78591152 1.57E-26 dispersed
Bhi11g02902 Bhi-Chr11:78591152 Bhi10g01476 Bhi-Chr10:35294504 6.63E-19 dispersed
Bhi11g02902 Bhi-Chr11:78591152 Bhi04g00783 Bhi-Chr4:19417359 3.20E-14 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi06g00600 . 16 131 Phytocyanin Superfamily AT1G48940 56.4 1.6e-36 150.2
Bhi11g02902 . 13 165 Phytocyanin Superfamily AT3G01070 54.8 1.6e-38 156.8
Bhi04g00052 . 7 171 Phytocyanin Superfamily AT2G25060 55.7 7.3e-45 177.9
Bhi11g02902 . 12 177 Phytocyanin Superfamily AT5G15350 53.9 1.0e-48 190.7
Bhi04g00052 . 16 171 Phytocyanin Superfamily AT4G31840 56.4 4.9e-46 181.8
Bhi06g00600 . 16 131 Phytocyanin Superfamily AT1G48940 56.4 1.6e-36 150.2
Bhi04g00052 . 9 172 Phytocyanin Superfamily AT5G25090 50.3 8.0e-39 157.9
Bhi04g00052 . 7 171 Phytocyanin Superfamily AT2G25060 55.7 7.3e-45 177.9
Bhi04g00052 . 16 171 Phytocyanin Superfamily AT4G31840 56.4 4.9e-46 181.8
Bhi11g02902 . 13 165 Phytocyanin Superfamily AT3G01070 54.8 1.6e-38 156.8
Bhi11g02902 . 12 177 Phytocyanin Superfamily AT5G15350 53.9 1.0e-48 190.7
Bhi02g01667 . 29 161 Phytocyanin Superfamily AT2G27035 52.2 1.6e-38 156.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006590 2 1 3 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 38