Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02946 AGTGTGTAGGCAAAACAAAACATATACCCCGTCTTCCCTTCTCTTCTCTTTAGCATTGACAGGAAAAAAAAAAAAAAGGTTCAGTCCTTTGATCTCCTTCTTCTTCTTCCTTATTCTCAACTCTAATGGCGACCTCAAAACCCCAAAGGTCACCTGAGGAGGTCGAAGACATTATCCTTCGAAAAGTCTTCCTCGTTTCTCTCACCGATTCTTCCGATTCCGATTCCAGAATCGTCTATCTCGAGCAAACCGCTGCCGAACTCCTAAGCGAGGGCAAACAATTGAGGATTTCAAGAGATATTATGGAGCGCATCATAATCGATCGTCTTTCCGGAAATTTCCCCTCCGCCGAACCCCCTTTTCAGTACCTAATCGGCTGCTACCGTCGAGCTCACGACGAGAGTAAGAAAATCGCTTCCATGAAGGATAAGACTCTGCGCTCTCATATTGAAATTTCCCTCAAGCAAGCCAAGAAGTTGACGATTTCGTATTGTAGGATTCATTTGGGGAATCCCGAATTGTTTTCGGGTGCCGATTTAGGTACTCCTAACTCCAACACTTCGCCTTTGCTTCCTTTGATTTTCTCTGAGGTTGGAAGCTCCATGGATGGATTTGGGGCTAGTACCAGTGTTGGTGGAGCCTTTCAGTGCCCTCCGGGTTTCCTGGAGGAGTTTCTTCGTGACCCGGATTTTGATACATTAGACCCCATCTTGAAGGGATTATATGAGGATTTAAGGGGTAGTGTCCTTAAAGTTTCTGCTCTTGGGAACTTCCAGCAGCCCTTAAGAGCACTTAGGTTTCTGGTCAGCTTTCCTGTTGGTGCTAAGTCTCTTGTCAAACATCCTTGGTGGATTCCCACTGGTAAATATTCCAATGGGCGTGTCATTGAGATGACAAGCATTTTGGGGCCTTTCTTCCATGTCAGTGCTCTGCCTGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGGCAGCAGTGCTTTTCAGAAGCATCAACTCGTAGACCAGCTGATTTACTATCTTCATTCACTACAATTAAGACAGTCATGAATAACTTATATGATGGCATTGCGGAAGTTCTTCTCTCCCTTCTTAAGAACACAGAGACCCGTGAAAATGTTCTTGAGTATCTTGCAGAGGTGATAAATAGAAACTCATCAAGGGCTCATATACAGGTTGACCCTCTCTCCTGTGCAAGTTCGGGCATGTTTGTTAATCTCAGTGCCATCATGCTACGTCTCTGTGAGCCATTTCTAGATGCAAACTTGACCAAAAGGGATAAAATTGATCCAAAATATGTATGTTATAGTAACCGCTTGGAGTTAAGAGGATTAACTGCTCTACATGCTTCATCGGAAGAAGTTACCGAATGGATTAACAATGGTACTCAGTTGAGAACTGATAACTCTGGGCAGTCCAGCGACAGTGAAAGTCGCTTGCTACAATCACAAGAAGCTTCCAGTTCTGGCAGTAATGCTACTCTTGGATCTTCTACTGCAAAAGCAAGATTGAGTAGTGATAAAACTAGGTACCCTTTCATATGTGAGTGCTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCAGACTTCAAGCATTTAGTACAGGATATATCTAGGTGTGAAGATACACTGTCCACGCTTAAAGCCATGCAGGGACAAGGGCCTGCCCCACAGCTTGAAATGGATATAGCTCGCCTTGAGAAGGAAATAGAGTTGTATTCACAGGAAAAGCTTTGTTATGAAGCTCAAATACTGAGGGATGGGACACTAATCCAGCAAGCTCTTACTTTCTATCGATTGATGGTTGTCTGGTTAGTTGGTTTGGTTGGTGGATTTAAAATGCCTCTTCCATCAACTTGCCCAATGGAATTTGCATCCATGCCAGAACATTTTGTGGAAGATGCGATGGAATTGCTTATATTTGCTTCTCGGATTCCAAAAGCTTTGGATGGTATCAATTTGGATGATTTTATGAACTTCATTATTATGTTCATGGCAAGTCCAGAATATATCAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTGAATTGCTGGATTCCTCGTAGAAGTGGTTCATCTGTAACAGCAACATTATTTGAAGGCCACCAACTATCGCTCGAGTATCTTGTTAGGAATCTTTTAAAACTCTATGTAGACATTGAGTTCACTGGTTCGCATACGCAGTTTTATGACAAGTTCAACATCCGTCATAATATTGCCGAACTTCTCGAGTACCTTTGGCAGGTTCCTAGTCATCGCAATGCTTGGAGAATGATTGCCAAGGAAGAAGAGAAGGGCGTCTACTTGAATTTCTTGAACTTCCTAATCAATGATAGCATTTATCTTCTTGATGAAAGCCTTAATAAGATTCTTGAACTTAAAGAGCTTGAAGCTGAAATGTCAAATACCGCAGAATGGGAACGGAGACCTGCTCAAGAGAGGCAGGAGAGAACTCGGCTGTTTCACTCCCAAGAGAATATCATTCGAATTGATATGAAATTAGCAAATGAGGACGTGAGCATGCTGGCATTTACTTCAGAGCAAATCACGGCTCCTTTCCTACTTCCGGAGATGGTTGAAAGGGTGGCCAGCATGCTTAATTATTTTCTCCTACAACTTGTTGGTCCTCAGCGAAGATCTCTTAGTCTGAAAGACCCTGAAAAGTATGAATTCCGTCCAAAAGAGTTGCTTAAGCAGATTGTTCACATATATGTTCATTTGGCACGAGGCGATTCGGAGAATATTTTCCCAGCTGCCATTTCAAAGGACGGCCGATCGTACAATGAGCAGTTGTTCACTGCCGCAGCAGTTGTACTTAACCGAATTGGAGAAGATGGTAGGATAATACAAGAGTTTATTGATCTTGGTAACAAAGCCAAGGATGCAGCTTCCGAGGCCATGGATGCTGAAGCTACTCTAGGAGATATACCGGACGAATTCCTCGACCCAATCCAATACACTTTAATGAAGGACCCTGTGATCTTACCTTCTTCGAGGATCACAGTCGACAGACCCGTCATTCAAAGACATCTCCTCAGCGATAGTACTGACCCATTCAATCGGTCTCATCTGACCGCAGACATGCTAATACCGAATGAAGAATTGAAAGCAAGAATTGAAGAATTTATCAGGTCACAAGAACTGAAGAAGCAACTGGATGGAGGGGTTGCAATGCAGAGCAGCAAGGCAACCATCCAACCCACAATCGGAGAAATGTTGATTGATTGATTAAAAGTAGAGAAATAACATAATTGCTTGTTATCTTATGGTCTGGGAATTAAATATTTTCTGAAAGATTTTTATATTTGATGATTTATATTATTATCTTTGGGCTCTATTCAGTGCTTATGCTGCCTAACCTTGTAAGTTGTAATATTTGAAAATAAAGATTTGTAACTTATCAGGAAAGTAATAACTGGAAAATGATCCGAAAGGAAGAATGATGAAATTATGAAATGAAATGAGACTATAGGTTGAGAAAAA 3506 41.87 MATSKPQRSPEEVEDIILRKVFLVSLTDSSDSDSRIVYLEQTAAELLSEGKQLRISRDIMERIIIDRLSGNFPSAEPPFQYLIGCYRRAHDESKKIASMKDKTLRSHIEISLKQAKKLTISYCRIHLGNPELFSGADLGTPNSNTSPLLPLIFSEVGSSMDGFGASTSVGGAFQCPPGFLEEFLRDPDFDTLDPILKGLYEDLRGSVLKVSALGNFQQPLRALRFLVSFPVGAKSLVKHPWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMNNLYDGIAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYSNRLELRGLTALHASSEEVTEWINNGTQLRTDNSGQSSDSESRLLQSQEASSSGSNATLGSSTAKARLSSDKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEMDIARLEKEIELYSQEKLCYEAQILRDGTLIQQALTFYRLMVVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRRSLSLKDPEKYEFRPKELLKQIVHIYVHLARGDSENIFPAAISKDGRSYNEQLFTAAAVVLNRIGEDGRIIQEFIDLGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNEELKARIEEFIRSQELKKQLDGGVAMQSSKATIQPTIGEMLID 1041
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 79473625 79492867 + XM_039047997.1 Bhi11g02946 51658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02946 1041 PANTHER UBIQUITINATION FACTOR E4 1 1019 IPR045132 GO:0000151|GO:0030433|GO:0034450
Bhi11g02946 1041 Pfam U-box domain 942 1012 IPR003613 GO:0004842|GO:0016567
Bhi11g02946 1041 MobiDBLite consensus disorder prediction 421 457 - -
Bhi11g02946 1041 Pfam Ubiquitin elongating factor core 260 925 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Bhi11g02946 1041 ProSiteProfiles U-box domain profile. 941 1015 IPR003613 GO:0004842|GO:0016567
Bhi11g02946 1041 SMART Ubox_2 945 1008 IPR003613 GO:0004842|GO:0016567
Bhi11g02946 1041 Coils Coil 520 547 - -
Bhi11g02946 1041 SUPERFAMILY RING/U-box 934 1012 - -
Bhi11g02946 1041 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 941 1019 IPR013083 -
Bhi11g02946 1041 PANTHER - 1 1019 - -
Bhi11g02946 1041 CDD RING-Ubox_UBE4A 944 1012 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02945 Bhi-Chr11:79473624 Bhi11g02946 Bhi-Chr11:79473625 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02946 K10597 - csv:101211398 1949.48