Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi11g02950 | GAAATCGGTTATAATGGGAAGAAGAAGAGAGCGGGGAGTTCATATTGTGCCGCCAAAAGCAACGGTAAACGGAAGTTGCCCTCAAATTGCTTCCATGTTCCATAACCATCAACCCTAAAAGCTTCCAATTTTTAGTGTTTTGCCCTATAATGGCGGCCATTTTTCCTCCAAATTTGGGGCTGAGAAATTCCCCCCTAAACTCTCTCTTCTACCTCCTACATATCATTCCCTTCTTAATTTTACCTCCCACTTCCTGTCTTGCCCTAATATGGACGTCTTCTTCACCTCCCGGCCTCCTTGAATCCCACCTCTATTTTCTTTTCAAGCTTTTCTAGGGTACTCCAAATCTCTCATTTTGCACCCTCTTTACCCAATTGGGTGCCCTAGAACTGTCTTCTCTTTCTTTTCATCTCAGCAGCTTATGATCTACCATTCCTGGTAGCTTACTATCTATGAGGAGGAGCCTGTCATAGAGGTCAAATGGGATTTAAATTTTCAAAGCCAAGTCAGGGGAAGGTGGAAAACCTTAGTCTGCAACACCACCTGATCAATTATCTCTCTAAAAGCTTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTATGATCTTGACATGTCATACATCACTGATCATGTACTGGCAATGTCATTCCCTGCAGAACGGATGCGCGCAGTGTATCGTAATCCCCTATGGCAAGTTAAGTCCGTATTGGACATGAGGCATCAAGGACACTACAAGATCTATAATCTCTGTATTGAAGAATCATATGATCCATCACATTTTCATGGACGCGTGGAGTCATTTCCTTTTGATGATAATCATGTTCCGCATCTACAGATGATCAAAATCTTCTGTGAAAATGTCTCTTCATGGCTATCATCCCACCCAAAGAATATTGCGGTTATACATTGCATGGCTGGAAAAGGTCGAACGGGATTGATGGTATGTGCCTACTTGGTTTACTGTGGCATGTCAGTCGAGGATGCACTTCAGCTGTATGCTCAGAGGCGGACGACCAATAACGAAGGAGTATCGATTCCAAGCCAACGACGGTACGTGGGCTACTGGTCAAAGTGCCTTTCCTTTCCCAAGGGAGTTTATAATGGACCTCCTGAGGTGAAGTTGCCCAAACCATGTAGGAGGGAGTTGCAGAGAATTCGTCTTTATGACACAGTGAACACTGAATCAATTTTCTTTGTGGTCTCAGAATTGCAGGAGGTTCCTTCTCAGCTATACCGTCCATCTATGGAACTTACCAGGAGTTGTTGCAGACGATTTAAGAGAGGATATGAGAGAAGTAACAGTCCTCGTTATTTTCTATCTTTTGTTGAAGGCGAAAATGAAGGGAGCAAGTCCACAGTAGAGCCCCATCTCATTGTTCAAATGGATACTGAGAGTTCCGCACTATACCATAAATCCTGCCTTGACTACAATTTTGAGAAGCCTTTACCACTAACTGGAGATGTGCGCATCATATTCTACGCAAAGATGTTTGGAGGGCGTCTCTTCTATGCTTGCTTCAACACAGCTTTCATTAAAAACAGCTTGCTACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCACTTTGTGGTCCTTCCTTCTGTTTGGAGTTGGTATTTGGTCCTGCCAATGCAAAACACTCGTATTTGACTTCATCGGATGACGACGAAGATCCTCAAAATGATTTGTCTTAAAATCTCAAAATGTAGAATAATTCTTCTTCATTCTTCTTCATTCTTCTTCTTCTTCCAGACAGACAGGGAGAGAATAGTTTTAAACACATTATCCCCTGTAATCAAATCATCTTCTCAGAAAGCAAACAACCCTTGTGAAAACCATTTGTATTTAATTGGACTTTTTATTGGTGGAAGGAAGGCATTAGGAGGAATAAACACAAATTTTGTATTTTAGAGTATAAGATTTTGCAGGTCCCCGTCCCTACCACACCCCCACCCCCCC | 1996 | 42.74 | MGFKFSKPSQGKVENLSLQHHLINYLSKSFYIRNLVSKQRRRMLVAGYDLDMSYITDHVLAMSFPAERMRAVYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPHLQMIKIFCENVSSWLSSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSVEDALQLYAQRRTTNNEGVSIPSQRRYVGYWSKCLSFPKGVYNGPPEVKLPKPCRRELQRIRLYDTVNTESIFFVVSELQEVPSQLYRPSMELTRSCCRRFKRGYERSNSPRYFLSFVEGENEGSKSTVEPHLIVQMDTESSALYHKSCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNTAFIKNSLLQLRLQDLDKVGKKGRSLCGPSFCLELVFGPANAKHSYLTSSDDDEDPQNDLS | 416 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 79506552 | 79512195 | - | XM_039047376.1 | Bhi11g02950 | 51662 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi11g02950 | 416 | SMART | PTEN_C2_2 | 223 | 394 | IPR014020 | - | |
| Bhi11g02950 | 416 | Gene3D | Protein tyrosine phosphatase superfamily | 28 | 209 | IPR029021 | - | |
| Bhi11g02950 | 416 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 149 | 159 | IPR016130 | GO:0016311|GO:0016791 | |
| Bhi11g02950 | 416 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 122 | 184 | IPR000387 | GO:0016311|GO:0016791 | |
| Bhi11g02950 | 416 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 41 | 210 | IPR029023 | - | |
| Bhi11g02950 | 416 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 49 | 207 | IPR029021 | - | |
| Bhi11g02950 | 416 | Pfam | Tyrosine phosphatase family | 144 | 186 | IPR026893 | GO:0004721 | |
| Bhi11g02950 | 416 | Gene3D | - | 275 | 397 | - | - | |
| Bhi11g02950 | 416 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 292 | 394 | IPR035892 | - | |
| Bhi11g02950 | 416 | Pfam | C2 domain of PTEN tumour-suppressor protein | 317 | 392 | IPR014020 | - | |
| Bhi11g02950 | 416 | PANTHER | BNAC03G16750D PROTEIN | 1 | 407 | - | - | |
| Bhi11g02950 | 416 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 1 | 407 | - | - | |
| Bhi11g02950 | 416 | CDD | PTP_PTEN | 51 | 205 | IPR045101 | GO:0016791 | |
| Bhi11g02950 | 416 | ProSiteProfiles | C2 tensin-type domain profile. | 241 | 395 | IPR014020 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi11g02948 | Bhi-Chr11:79506552 | Bhi11g02950 | Bhi-Chr11:79506552 | 0 | dispersed | |
| Bhi11g02949 | Bhi-Chr11:79506552 | Bhi11g02950 | Bhi-Chr11:79506552 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi11g02950 | K01110 | - | csv:101212127 | 816.224 |