Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g02977 AAATTTCTCCACGCTGACACTTCACTCGTGTCTGATCTCTTTCTCTCTCTTTTTTGGATTTGATTTAAAAAATTAAAATAGCAAAAATAGAGGAAAAAAATAAAAAGAAAAAAAAAAACAGGGCAGAAATGTCGGAGCCAAAAGATCCGGCGATCAAGCTCTTTGGGAAGACGATTCCTCTTCCGGAGGCTTCTCCGGCCACTCCTCAGCTTCCATCTTCTTTACCTATTCTCACAGCCAGTGACAAGAACACCGCCGCTGTTAATCATGACCACGATTCTTCTTCTTCAAGCTTGTCACCGGAAGGTAATATCGATGGGGATGGTGAAGATCTGGAGGTCGATAAGGAGACTGTAAGAGAGAAATCAGGTGAAACTAAGCTGGAAGATGGGGATGGAGATGGAGATGGAGGCTTATCTGGTTCGACCGAAGAGTTTACAAATTCGGATACTTCTGCCATGAGATCGGATAATTCTAAAGTACTTTCTGGTGAGGAAAGTAATCCGTCGAGTACTACAAAGACTGATGAACAGAATGAAACAAGTAACTCGCAAGAGAAGACTCTTAAGAAACCCGACAAGATACTTCCGTGCCCCCGCTGTAACAGCATGGATACTAAGTTCTGTTACTATAATAACTACAATGTTAATCAACCGCGCCACTTTTGTAAGAACTGTCAAAGGTATTGGACTGCTGGAGGGACAATGAGGAATGTTCCTGTGGGTGCAGGGCGTCGTAAGAACAAGAGTTCTGCCTCTCATCATCGTCAGATTATTGTTTCAGAAGCGCTTCAGCATGCTCGAACTGATGTTTCTAATGGTATTCATCATTCTACCCTGAAACCGAATGGCAATGGTAATGTATTGGCATTTGGTTCAGACGCCCCTCTTTGTGAATCAATGGCTTCCATTTTGAACATTGCTGATAAAACAAGGCAGAATAGTACTAGAAATGGCTTTCAAAAACCTGAAGCTCTGAAAATTCCTGTGGCTTATGAGAATGGTGAAAATGATGATCAGTCTCAGGAATCTGCTGCAACTCCATCATTTATAGATAATGAAGAAGGCAAGACTGGGCCACAAGATCAAGTGATTCATAATTGTCAAGGCTTTTTACCTCCTCAGATTCCATTTTTCCCTGGGGCTCCTTGGCCTTACCCTTGGAATTCACCACAATGGAGCTCTCCTGTTCCACCTCCTACTTTCTATTCACCAGGCATTCCCATGCCATTCTATCCGACTGCCCCGTTTTGGGGTTGTACGGTTCCTGGCGCCTGGACCGTTCCATGGGTTACCCAGCCGCCATCTCTGAACCCTGTTGCCCAAAACCACGCTCCCAACTCTCCAACCTTGGGGAAACATTCAAGAGATGAGAATGTAACCAAGCAGAGCGATTTTGGGGGAGACGAGCAGCAGAAAGATAACAAAGCTGAGAGATGCCTTTGGATACCAAAAACGTTGAGAATCGACGACCCTGGTGAAGCAGCTAAAAGCTCCATATGGGCAACTTTAGGAATCAAGAATGACAAGACTGATCCAGTCAGTGAAGGGCTTTTCCAGGCTTTTCAATCAAAGAAGACCGACGAAAAGAATCGCAAAGCGGAAGCCTCTCCAGTCTTGCAAGTCAATCCAGCTGCATTGTCCAGATCAATCAAATTTCACGAAAGCTCGTAAATGGATACAACAATGCTTTTCCCCGAACGTGCCATCAAAGTGTTCGCTGCAGCCCATATGGATGGTACACGTTTAAACCAACTTACAACTACCTCGAGTTCATCCTTCTGTTTCAAATCTGTATAAATCATTAGATCCATCCAAGGAAAAGAACTGTAGATCCTATGGCGGTTACCTTCTAGAAGAAAAGCCCTCGAGTTTCCGTAGCGAAAATGACTTTAGTTTTTATTGTGTACTTGTAGTGTTGAAGTAGATGGCACATTTTGTTTGTAGTCTGAAGTTTTTTCTGAATCATGATGTACATATATATATAAATGTGTGGGAACCAGGAAGAGTTAGTACAGGAGTGAGTGAGGTGTAGTAGTAGTACCAATAATAACTAAAATGTGTACTTGAATAATCTTTTAGAAATAAATTTTAAAAGAACTGATCTTACA 2110 42.61 MSEPKDPAIKLFGKTIPLPEASPATPQLPSSLPILTASDKNTAAVNHDHDSSSSSLSPEGNIDGDGEDLEVDKETVREKSGETKLEDGDGDGDGGLSGSTEEFTNSDTSAMRSDNSKVLSGEESNPSSTTKTDEQNETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSASHHRQIIVSEALQHARTDVSNGIHHSTLKPNGNGNVLAFGSDAPLCESMASILNIADKTRQNSTRNGFQKPEALKIPVAYENGENDDQSQESAATPSFIDNEEGKTGPQDQVIHNCQGFLPPQIPFFPGAPWPYPWNSPQWSSPVPPPTFYSPGIPMPFYPTAPFWGCTVPGAWTVPWVTQPPSLNPVAQNHAPNSPTLGKHSRDENVTKQSDFGGDEQQKDNKAERCLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDPVSEGLFQAFQSKKTDEKNRKAEASPVLQVNPAALSRSIKFHESS 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 80392837 80395476 + XM_039049431.1 Bhi11g02977 51689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g02977 514 MobiDBLite consensus disorder prediction 1 153 - -
Bhi11g02977 514 MobiDBLite consensus disorder prediction 137 151 - -
Bhi11g02977 514 Pfam Dof domain, zinc finger 150 207 IPR003851 GO:0003677|GO:0006355
Bhi11g02977 514 MobiDBLite consensus disorder prediction 412 434 - -
Bhi11g02977 514 MobiDBLite consensus disorder prediction 98 136 - -
Bhi11g02977 514 MobiDBLite consensus disorder prediction 70 91 - -
Bhi11g02977 514 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 513 - -
Bhi11g02977 514 MobiDBLite consensus disorder prediction 25 60 - -
Bhi11g02977 514 MobiDBLite consensus disorder prediction 394 411 - -
Bhi11g02977 514 MobiDBLite consensus disorder prediction 292 316 - -
Bhi11g02977 514 ProSitePatterns Zinc finger Dof-type signature. 155 191 IPR003851 GO:0003677|GO:0006355
Bhi11g02977 514 MobiDBLite consensus disorder prediction 394 434 - -
Bhi11g02977 514 ProSiteProfiles Zinc finger Dof-type profile. 153 207 IPR003851 GO:0003677|GO:0006355
Bhi11g02977 514 PANTHER CYCLIC DOF FACTOR 2 1 513 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00303 Bhi-Chr2:5756169 Bhi11g02977 Bhi-Chr11:80392837 1.43E-139 dispersed
Bhi02g00304 Bhi-Chr2:5756169 Bhi11g02977 Bhi-Chr11:80392837 1.43E-139 dispersed
Bhi07g01554 Bhi-Chr7:44599891 Bhi11g02977 Bhi-Chr11:80392837 6.81E-103 dispersed
Bhi08g02203 Bhi-Chr8:63004135 Bhi11g02977 Bhi-Chr11:80392837 7.72E-37 dispersed
Bhi11g02870 Bhi-Chr11:77071125 Bhi11g02977 Bhi-Chr11:80392837 5.11E-79 dispersed
Bhi11g02977 Bhi-Chr11:80392837 Bhi01g01514 Bhi-Chr1:30926443 3.84E-26 dispersed
Bhi11g02977 Bhi-Chr11:80392837 Bhi08g01160 Bhi-Chr8:36498204 4.81E-100 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2546 PF02701 zf-Dof 2.20E-32 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g02977 - - cmo:103486992 941.028