Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g03000 AGATATTTCACTTCCTTCCTTCAAAATTAAAAGTATCTTAGCGCTTCTTCCATAAGGCACTTAAAAAAAAGAAAAGAAAAAATAACTCCCAAATTTTCAAAATCCCTAAAAAATGGCGAGAGAGATCCCAAAATCGAGCAATTGGACCAGCAGCAATGAAGAAGCCTTAATCGGAAGCGAATGCTCTGATCCTCAACAATCCTTCTTTCGCGACCGATTTTACGAACTTTACCCGCCGGAGTTCTCAAGAAAGCTTGTGGCGGAGGTGATTGCGACGTATTTGCTTGTGTTCGTGACGTGTGGAGCGGCGGCATTGAGTGTTAGTGATGAACGGGAAGTGTCCAAGCTTGGTGCGTCGATTACCGGCGGACTGATAGTCACGGTGATGATTTACGCCGTTGGACATATCTCCGGCGCTCATATGAATCCGGCGGTTACTTTTGCTTTTGCTGCTGTTCGCCGATTTCCTTGGAATCAGGTTCCATTATATGCAGCAGCTCAATTAAGTGGAGCTACAACAGCAGCCTTTACATTGCGCATATTATTGGATCCAATTCAAGATTTAGGTACAACTTCACCTTCTGGACCAATCTTTAAAGCACTTCTTATGGAGATTGTTGTCTCATTCTGTATGATGTTCGTCACTTCTGCGGTTGCTACCGACACAAAAGCTGTAGGAGAGCTTGCAGGCATAGCAGTGGGGTCAGCTGTATGTATCACATCCATCTTTGCTGGGCCTATATCGGGTGGGTCGATGAACCCAGCAAGGTCAATAGGACCAGCGATTGCAAGTTCACGTTACGAAGGGATTTGGGTGTACCTGGTCGGCCCAGTTGCAGGGACATTGCTAGGAGCATTTTCATATAACTTCATACGAGCCACTGAGAAACATTCTCGTTCACTTTCTTTACAATGAATCGGATTATGCTGGATGTTCAAATCATATCAATGAGTTTAATTATTGTATAATTTGTGTATGTTGTATCAAAGCTGTAACGTTTAATTTTAAGTCGTATTTTTCTGTATTTTTTTTAAAATTTTTTAAGGTAAGGTTAGATTTAATTTTCAGTCTCTTTTGCATTTTTTTTTAAGTTGAGAGAATAATGGATCTGAAATAAGGGATTCATTGTTATTTTACAATGTGAGCTTTGGTCTGAGTTTTGTACGATAATCAATCAGAAATTTATTTATCCTTTTCCAA 1201 40.47 MAREIPKSSNWTSSNEEALIGSECSDPQQSFFRDRFYELYPPEFSRKLVAEVIATYLLVFVTCGAAALSVSDEREVSKLGASITGGLIVTVMIYAVGHISGAHMNPAVTFAFAAVRRFPWNQVPLYAAAQLSGATTAAFTLRILLDPIQDLGTTSPSGPIFKALLMEIVVSFCMMFVTSAVATDTKAVGELAGIAVGSAVCITSIFAGPISGGSMNPARSIGPAIASSRYEGIWVYLVGPVAGTLLGAFSYNFIRATEKHSRSLSLQ 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 81335315 81339110 + XM_039050168.1 Bhi11g03000 51712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g03000 267 SUPERFAMILY Aquaporin-like 37 260 IPR023271 -
Bhi11g03000 267 PRINTS Major intrinsic protein family signature 46 65 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 PRINTS Major intrinsic protein family signature 85 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 PRINTS Major intrinsic protein family signature 122 141 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 13 266 - -
Bhi11g03000 267 MobiDBLite consensus disorder prediction 1 20 - -
Bhi11g03000 267 PANTHER AQUAPORIN NIP2-1 13 266 IPR034294 -
Bhi11g03000 267 Gene3D Glycerol uptake facilitator protein. 13 264 IPR023271 -
Bhi11g03000 267 Pfam Major intrinsic protein 42 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi11g03000 267 ProSitePatterns MIP family signature. 103 111 IPR022357 -
Bhi11g03000 267 CDD MIP 46 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00001 Bhi-Chr3:15650 Bhi11g03000 Bhi-Chr11:81335315 9.50E-77 dispersed
Bhi08g02229 Bhi-Chr8:63446124 Bhi11g03000 Bhi-Chr11:81335315 7.45E-31 dispersed
Bhi11g03000 Bhi-Chr11:81335315 Bhi12g00042 Bhi-Chr12:846001 8.84E-62 dispersed
Bhi11g02999 Bhi-Chr11:81222850 Bhi11g03000 Bhi-Chr11:81335315 2.96E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g03000 K09874 - csv:101205456 417.927