Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g03003 TTTCCTTCAAAATTTTCAAAATTTTATTATTATTATTATTTTTTTATTTTCTAAATTTAACATTATTATTATTATTATCAACAGTCATCACTGCTCATCATCATCTCCTTTTTTCCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCTTTCTTCTTCTTTTTCTGTGTCGCCTTTTTCTGGTTTCTGGTCTCCAATTCCCAATTTCAAACCCATCTGTTCCCTAATTTGTTTTTCCTCCCCCAATTTTCTCGAGAAACAAACACAATTTCACTTGGGGGTTTTCAAGTTATACGAAGTTTAATTTTGATTTTGAATTCTTTCGTTGTAAAGGGTTTGTAGTGCGACCCTTTTAAGAGGGTGTTTTCTCTGTTTTTTTTATTTTGTTTATTTTAATTCCATTTTTTTTTATATAAAAAATTTCTTCTTTTTAGCTTTTTGAGTTACCCTAAATGTTTGAGCTATGGACTTGACTCCTGCAATTTCCACCGCCGCCGCCACCATTTCTACCGGTGGAGGAGCTGTGAAATCCCCCGAATTAGACACTGAAACCCCCATCAAAATCCAACCCACCACCAAATCTCACCCCTTCACTAACGGCGTCCTCAAGCGCCACCACCACACGCCGCCGCCGCCTCCCCAGGTGGTCTACAAAGAATGCCTCAAGAATCAACCCGCCAGTTTGGGCGGCCATGCTCTAGACGGCTGCGGCGAGTTCATGTCANTCCCCACCGCCACCGCCACCGATCCCACCTCCCTCAAATGCGCCGCTTGCGGCTGCCACCGTAATTTCCACCGCCGTGAACCCGAGGACCCAATCGCTACTCCGACGACAACCCATGTCATTGAGTACCAACCCNNATCACGCCACCACCCGCCTCCGCCGCCTGCGGCGGCGGCATCCCACCGGAGCCCGAGTTCCGCCTCTCCTCCTCCGATCTCCTCCTCGTACTACCCTTCAGCTCCGCACATGCTTCTGGCCCTCTCTGGTGGGCTTCCGGATAACGCCGGCAGCGGCGGTGGATTCCACCACTCGATTCTGACTCCGAGCCACAATTCGAGAAAGCGATTCAGAACGAAATTCACTCAAAATCAGAAGGAGAAAATGTACGAATTTGCAGAGAAAGTGGGATGGAAGATTCAGAAACGAGACGAGGATATGATCCAAGAATTCTGCAGCGATGTCGGAGTAGACAGAGGGGTTCTCAAAGTTTGGATGCACAACAACAAGAACACTCTCGGGAAAAAAGACGGCGGCCGGAACATCAACGGCAGCGGCGGCGTTGGGGACGGCGATGAGAAAATTAACGGCGGTGGTGAGCCACACGCCGCCGCAAATGGGTCATCTTCTTCCTCTTGATCTGAATAAATTGTTCGATGGATGTTAGAGAGAATATCAGAGATAGAAGAGTAAGCTTTTTTTTTTTTGCCCTCTTTCCTTTTTTTTTTTCTCCCCCAAGTTCATTTTCTAATTACATTTCAATATCTAAATTCCCACTCCAAAATATTTTCTCATTTTGTTTTTAATTAAATTAACGAGAAGATCACCTTGATAATATATGCTGAGAATTTAACATGAGGAATAATATATGTAGTTCATCATCATCATTATCATTAATTCATCTAATTACTTTAATTAGTTTATTAATCATTTTCCCCTTGTCGCCTAATCTCAAGGATTTTAATAATTAAACAAGGAAATCATCTGGAAATCCTGAATGGTATTAGTAAATAAGCAAATCTGTTCTTGATCTTCTCTTTTCCAAAATAAATAAATAAATAAATAATGTTATTAATTGTTATGAATCTGATTTAGAGAGAGGAGAGAGATATTTCTTCTTATCTTCTGTCTGAGAGAAAGCAGCAGAAAGTGTTTTGGTTCCTGTAAATTATTCTAGACTATCCCTAAGATTTGAACAGCACAGTATTTCTTTTTCTTTTCTTTTTTTTTT 1964 41.45 MDLTPAISTAAATISTGGGAVKSPELDTETPIKIQPTTKSHPFTNGVLKRHHHTPPPPPQVVYKECLKNQPASLGGHALDGCGEFMSXPTATATDPTSLKCAACGCHRNFHRREPEDPIATPTTTHVIEYQPXSRHHPPPPPAAAASHRSPSSASPPPISSSYYPSAPHMLLALSGGLPDNAGSGGGFHHSILTPSHNSRKRFRTKFTQNQKEKMYEFAEKVGWKIQKRDEDMIQEFCSDVGVDRGVLKVWMHNNKNTLGKKDGGRNINGSGGVGDGDEKINGGGEPHAAANGSSSSS 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 81564559 81566521 + XM_039050271.1 Bhi11g03003 51715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g03003 298 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 63 114 IPR006456 -
Bhi11g03003 298 SUPERFAMILY Homeodomain-like 193 261 IPR009057 -
Bhi11g03003 298 MobiDBLite consensus disorder prediction 259 298 - -
Bhi11g03003 298 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 1 272 - -
Bhi11g03003 298 MobiDBLite consensus disorder prediction 174 202 - -
Bhi11g03003 298 Pfam ZF-HD protein dimerisation region 61 115 IPR006456 -
Bhi11g03003 298 Gene3D - 192 261 - -
Bhi11g03003 298 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 63 114 IPR006456 -
Bhi11g03003 298 MobiDBLite consensus disorder prediction 16 60 - -
Bhi11g03003 298 MobiDBLite consensus disorder prediction 112 162 - -
Bhi11g03003 298 MobiDBLite consensus disorder prediction 30 44 - -
Bhi11g03003 298 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 1 272 - -
Bhi11g03003 298 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 200 257 IPR006455 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01569 Bhi-Chr7:44900340 Bhi11g03003 Bhi-Chr11:81564559 4.27E-56 dispersed
Bhi11g00836 Bhi-Chr11:23129785 Bhi11g03003 Bhi-Chr11:81564559 1.27E-15 dispersed
Bhi08g01318 Bhi-Chr8:40054411 Bhi11g03003 Bhi-Chr11:81564559 4.41E-41 transposed
Bhi11g03003 Bhi-Chr11:81564559 Bhi06g00400 Bhi-Chr6:8781289 3.23E-98 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2547 PF04770 ZF-HD_dimer 1.30E-26 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g03003 - - csv:101204974 484.567