Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g03018 CTCCAATCAGAATCAGATCGATCGGCATCATCATCATCTTCTTCCATCTGTTCTTGATAATCGAATTGCTGATTCTGCAACTCGGATCGCAAAAAAAGAGCTTCAAATTCTCCGATTCCCAGGCCCTTCTCTTCCTTCGTCTTCAACTAGCCTTGCAAATTCCCCCTCACAGTTCTGCATCGTTAGGTTTCTTTCGGAGGAGGCGTTTGGTTTCTTACCATTGCTCTCCCCTTCCCTTTCCCCACTCCAGATCTTCTCCTCTTTCAATTCCTTACCGTTTCGATCATCTTTTAGAGAATGTATGGTTTCGAAGCGCTTACCTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGGGGACATAGGGCTGGGTTGCTCACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCATCTCTCTGCCACTGAGTATGGCCCTTATCTCCAAAACGAACCATCTCCATTACATACAACAACCATTGTGGAGAAATGCACCCTTAAACTGGTTGATGAGTATAAGCACATGTTGTGCCAAGCCACCGAGCCTCTGTCTACCTTCTTAGAGTATATCACATATGGTCATATGATAGACAATGTTGTCCTTATTGTTACTGGAACCTTGCATGAGAGGGATGTTCAGGAACTGTTGGAGAAGTGCCACCCTTTGGGCATGTTTGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCCTTGGCTCCATACTTCTCAGAGTGTATCACATCTGAGGATTTGGATGACATGAACATAGAAATTATGAGGAACACTCTCTACAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGAGATGACAGGAGGAAGTTATATTCCAATTTTGGCTTACTGTATCCCTATGGGCACGAGGAACTTGCAATCTGTGAGGATATTGATCAGGTTCGTGGTGCCATGGAAAAATACCCTCCCTACCAGTCAATTTTTTCCAAGCTATCATATGGAGAGAGTCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCTTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGGGAACAGGAGATTAGGAACCTAATGTGGATTTCGGAGTGCGTTGCTCAGAACCAGAAATCGAGGGTTCATGACAGTGTTGTCTTCATATTTTAGGCTGATTATTAAAAAAGCAAAAGCTGTCTTAATTAATCATATTTGTTTCCTGTTTTTGCATAATTCACTGTAAAATCTTGTCTCCATCTTATCCTATATTGTGCTGCAGAGATGGGGGTTCATACATTCTTTCCATGCAAGACTTTGTCTAAATAAGTGCGCTCTTTTTGATGTATTAATGTCTTAAAATTGAGTGAGAAATCATTGTACTCAGAAGAATTATATCAGATACTGTGTGTGAAAGAAGAAAGATGAAATTGAGTTTATATAATAAAGTTTTTGTATACATCA 1644 41.91 MYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 82182974 82187233 + XM_039050393.1 Bhi11g03018 51730

Annotation


Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g03018 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0033179|GO:0046961|GO:1902600
Bhi11g03018 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179|GO:0046961|GO:1902600
Bhi11g03018 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Bhi11g03018 351 Gene3D - 91 199 IPR035067 -
Bhi11g03018 351 Gene3D - 206 309 IPR035067 -
Bhi11g03018 351 PANTHER V-TYPE PROTON ATPASE SUBUNIT 1 351 - -
Bhi11g03018 351 SUPERFAMILY V-type ATP synthase subunit C 14 349 IPR036079 -
Bhi11g03018 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
       

Pathway


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g03018 K02146 ATPeV0D, ATP6D; V-type H+-transporting ATPase subunit d - csv:101203260 715.687
       

Deco-Alignment


Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1489 . Blo11g00688 . . . . . . . Cmo11g01055 . . . . . . . . . . . . . . Cla10g01421 Cam10g1191 Cec10g1502 Cco10g1485 Clacu10g1482 Cmu10g2246 Cre10g1627 . . . Cone16ag0861 . . Chy04g01523 Cme04g01965 . . . . . . . . . . . . . . . Cpe04g00069 . Bhi11g03018 . . . . . . . . . . . . . . Csa03g03857 . .
       

Syn-Families


Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi04g00444 . 1 998 Primary Pumps ATPases(2) AT1G10130 82.4 0.0e+00 1616.3
Bhi04g00445 . 1 870 Primary Pumps ATPases(2) AT1G10130 82.3 0.0e+00 1410.2
Bhi10g00598 . 1 814 Primary Pumps ATPases(2) AT2G28520 81.0 0.0e+00 1338.9
Bhi04g00220 . 1 803 Primary Pumps ATPases(2) AT2G28520 63.4 1.8e-297 1019.2
Bhi05g01790 . 10 813 Primary Pumps ATPases(2) AT2G28520 62.8 1.0e-292 1003.4
Bhi04g00218 . 1 775 Primary Pumps ATPases(2) AT2G28520 61.2 3.4e-283 971.8
Bhi04g00219 . 1 783 Primary Pumps ATPases(2) AT2G28520 61.1 9.8e-283 970.3
Bhi05g01790 . 6 818 Primary Pumps ATPases(2) AT2G21410 76.0 0.0e+00 1234.9
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT2G21410 74.0 0.0e+00 1204.9
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT2G21410 71.7 0.0e+00 1156.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT2G21410 71.8 0.0e+00 1154.4
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT2G21410 62.3 1.3e-298 1023.1
Bhi05g01790 . 8 818 Primary Pumps ATPases(2) AT4G39080 77.2 0.0e+00 1238.0
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT4G39080 74.3 0.0e+00 1198.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT4G39080 72.1 0.0e+00 1150.6
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT4G39080 71.8 0.0e+00 1147.5
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT4G39080 63.4 2.4e-297 1018.8
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi04g00232 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi04g00233 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi09g02673 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.9e-66 248.4
Bhi04g00232 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g00233 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 8.4e-53 203.8
Bhi04g00232 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g00233 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g01015 . 6 180 Primary Pumps ATPases(2) AT2G25610 85.1 6.3e-70 261.5
Bhi09g02278 . 4 180 Primary Pumps ATPases(2) AT2G25610 81.4 3.1e-69 259.2
Bhi09g02277 . 4 198 Primary Pumps ATPases(2) AT2G25610 73.8 7.2e-66 248.1
Bhi09g02279 . 4 137 Primary Pumps ATPases(2) AT2G25610 71.6 8.0e-41 164.9
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g01015 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 8.1e-72 267.7
Bhi09g02278 . 11 180 Primary Pumps ATPases(2) AT4G32530 76.5 8.1e-72 267.7
Bhi09g02277 . 11 198 Primary Pumps ATPases(2) AT4G32530 70.2 1.9e-68 256.5
Bhi09g02279 . 11 142 Primary Pumps ATPases(2) AT4G32530 75.0 1.8e-42 170.2
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.3 0.0e+00 1664.4
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.3 0.0e+00 1668.7
Bhi04g00444 . 1 998 Primary Pumps ATPases(2) AT1G10130 82.4 0.0e+00 1616.3
Bhi04g00445 . 1 870 Primary Pumps ATPases(2) AT1G10130 82.3 0.0e+00 1410.2
Bhi08g00646 . 22 1046 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1315.1
Bhi02g02086 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.9 2.0e-57 219.2
Bhi05g01683 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi05g01684 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi11g02100 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02099 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02098 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi12g01185 . 1 376 Primary Pumps ATPases(2) AT1G12840 83.8 4.5e-182 634.8
Bhi05g02069 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi05g02068 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi11g02811 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02812 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02813 . 1 369 Primary Pumps ATPases(2) AT3G42050 79.4 2.0e-168 589.7
Bhi04g00232 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g00233 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi05g01683 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01684 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01683 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi05g01684 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi10g00598 . 1 814 Primary Pumps ATPases(2) AT2G28520 81.0 0.0e+00 1338.9
Bhi04g00220 . 1 803 Primary Pumps ATPases(2) AT2G28520 63.4 1.8e-297 1019.2
Bhi05g01790 . 10 813 Primary Pumps ATPases(2) AT2G28520 62.8 1.0e-292 1003.4
Bhi04g00218 . 1 775 Primary Pumps ATPases(2) AT2G28520 61.2 3.4e-283 971.8
Bhi04g00219 . 1 783 Primary Pumps ATPases(2) AT2G28520 61.1 9.8e-283 970.3
Bhi11g03018 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 9.8e-192 666.8
Bhi09g00220 . 1 623 Primary Pumps ATPases(2) AT1G78900 93.3 0.0e+00 1171.0
Bhi05g01683 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi05g01684 . 6 488 Primary Pumps ATPases(2) AT1G76030 96.1 1.2e-267 919.5
Bhi05g01683 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01684 . 1 488 Primary Pumps ATPases(2) AT4G38510 95.3 1.9e-268 922.2
Bhi05g01683 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi05g01684 . 9 488 Primary Pumps ATPases(2) AT1G20260 95.8 2.5e-265 911.8
Bhi12g01185 . 1 376 Primary Pumps ATPases(2) AT1G12840 83.8 4.5e-182 634.8
Bhi05g02069 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi05g02068 . 1 261 Primary Pumps ATPases(2) AT3G58730 81.2 5.1e-116 414.8
Bhi02g02086 . 1 126 Primary Pumps ATPases(2) AT4G02620 84.9 2.0e-57 219.2
Bhi11g02100 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02099 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02098 . 2 109 Primary Pumps ATPases(2) AT3G01390 80.6 3.4e-37 151.8
Bhi11g02811 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02812 . 3 454 Primary Pumps ATPases(2) AT3G42050 79.9 1.3e-207 719.9
Bhi11g02813 . 1 369 Primary Pumps ATPases(2) AT3G42050 79.4 2.0e-168 589.7
Bhi10g00598 . 1 814 Primary Pumps ATPases(2) AT2G28520 81.0 0.0e+00 1338.9
Bhi04g00220 . 1 803 Primary Pumps ATPases(2) AT2G28520 63.4 1.8e-297 1019.2
Bhi05g01790 . 10 813 Primary Pumps ATPases(2) AT2G28520 62.8 1.0e-292 1003.4
Bhi04g00218 . 1 775 Primary Pumps ATPases(2) AT2G28520 61.2 3.4e-283 971.8
Bhi04g00219 . 1 783 Primary Pumps ATPases(2) AT2G28520 61.1 9.8e-283 970.3
Bhi05g01790 . 6 818 Primary Pumps ATPases(2) AT2G21410 76.0 0.0e+00 1234.9
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT2G21410 74.0 0.0e+00 1204.9
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT2G21410 71.7 0.0e+00 1156.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT2G21410 71.8 0.0e+00 1154.4
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT2G21410 62.3 1.3e-298 1023.1
Bhi05g01790 . 8 818 Primary Pumps ATPases(2) AT4G39080 77.2 0.0e+00 1238.0
Bhi04g00220 . 1 808 Primary Pumps ATPases(2) AT4G39080 74.3 0.0e+00 1198.0
Bhi04g00218 . 1 780 Primary Pumps ATPases(2) AT4G39080 72.1 0.0e+00 1150.6
Bhi04g00219 . 1 788 Primary Pumps ATPases(2) AT4G39080 71.8 0.0e+00 1147.5
Bhi10g00598 . 9 819 Primary Pumps ATPases(2) AT4G39080 63.4 2.4e-297 1018.8
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G34720 99.3 2.2e-60 229.2
Bhi09g02673 . 1 122 Primary Pumps ATPases(2) AT1G19910 99.2 8.4e-53 203.8
Bhi04g00232 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g00233 . 1 122 Primary Pumps ATPases(2) AT1G19910 98.4 1.9e-52 202.6
Bhi04g00232 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g00233 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi09g02673 . 28 165 Primary Pumps ATPases(2) AT4G38920 99.3 6.1e-60 227.6
Bhi04g00232 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi04g00233 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.8 2.2e-66 249.6
Bhi09g02673 . 2 165 Primary Pumps ATPases(2) AT1G75630 80.3 4.9e-66 248.4
Bhi04g00232 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g00233 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi09g02673 . 3 165 Primary Pumps ATPases(2) AT2G16510 99.4 6.8e-74 274.2
Bhi04g01015 . 1 180 Primary Pumps ATPases(2) AT4G32530 73.8 8.1e-72 267.7
Bhi09g02278 . 11 180 Primary Pumps ATPases(2) AT4G32530 76.5 8.1e-72 267.7
Bhi09g02277 . 11 198 Primary Pumps ATPases(2) AT4G32530 70.2 1.9e-68 256.5
Bhi09g02279 . 11 142 Primary Pumps ATPases(2) AT4G32530 75.0 1.8e-42 170.2
Bhi04g01015 . 6 180 Primary Pumps ATPases(2) AT2G25610 85.1 6.3e-70 261.5
Bhi09g02278 . 4 180 Primary Pumps ATPases(2) AT2G25610 81.4 3.1e-69 259.2
Bhi09g02277 . 4 198 Primary Pumps ATPases(2) AT2G25610 73.8 7.2e-66 248.1
Bhi09g02279 . 4 137 Primary Pumps ATPases(2) AT2G25610 71.6 8.0e-41 164.9
Bhi11g03018 . 1 351 Primary Pumps ATPases(2) AT3G28710 94.3 8.5e-199 690.3
Bhi11g03018 . 1 351 Primary Pumps ATPases(2) AT3G28715 92.0 9.8e-192 666.8
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07810 80.3 0.0e+00 1664.4
Bhi08g00646 . 22 1046 Primary Pumps ATPases(2) AT4G00900 65.5 0.0e+00 1315.1
Bhi04g00444 . 1 998 Primary Pumps ATPases(2) AT1G10130 82.4 0.0e+00 1616.3
Bhi04g00445 . 1 870 Primary Pumps ATPases(2) AT1G10130 82.3 0.0e+00 1410.2
Bhi08g00646 . 1 1065 Primary Pumps ATPases(2) AT1G07670 80.3 0.0e+00 1668.7
       

Syn-Orthogroups


Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002725 1 2 2 1 2 1 1 2 1 1 2 1 2 1 2 2 1 3 2 1 1 2 2 2 2 2 1 2 5 2 52