Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g03021 AATTAGCAATGGAGGCGACAGCTTTGGTACTGAAGAACGAGGAGAATCTAAGAATATGTTGGACGGAAGGTCAAACTCAGGCCATAAGACGTGTCAAGAGACGGCGGAGAGACCCAGCTGCCGCCACCACCGGTCAAACTAATAAGCAGCAGTCGCCGAAGCAACAATCTGATCAAGCTCCGACCACCACTATGAAGCGTAGTTCAAGATTTCGTGGCGTTAGCAGACACAGATGGACGGGTCGATTTGAAGCTCATTTATGGGATAAACTTTCTTGGAATATGACACAGAAGAAGAAGGGCAAACAAGTTTATCTTGGAGCTTATGATGAAGAAGAATCAGCTGCAAGAGCATATGATTTAGCAGCACTCAAGTATTGGGGTGTAACAACCATCACTAATTTCCCTATATCAGAGTATGAGAAAGAGATTGAGATAATGCAAACAATGACAAAGGAGGAATATTTAGCCTCTTTAAGAAGAAAGAGCAGTGGCTTCTCAAGAGGTGTATCAAAGTATAGAGGAGTTGCAAGGCACCATCACAATGGTAGATGGGAAGCAAGAATAGGGAGAGTTTATGGGAACAAATACCTCTATCTTGGAACTTACGGCACTCAAGAAGAAGCTGCTCGAGCTTATGATATGGCCGCTATTGAATACCGAGGGATCAATGCAGTCACCAACTTCGACTGGAGCAATTACATGGCCTGGCTAAAGCCTCCGCCGCCGCCATCCGCCACCCAGAGCGAAGCCCATATGGCAACAGACCCCCACAATGAGCTCTGCAACTCCAGCTCAATCCCAGCTGATGAAACTTCACTCTTCAAAAACCATCACTACGACATCGATTCCTTTCATTCCCTTCAAAAGCAAGAGCTTCTCGAGAGCTGCAACGCCCCGCTCAATGCTTATGCTAGATCTTCTTCTGCATCAGCACTCGACCTCCTTCTTCGATCATCAATTTTCAAGAAACTGGTCGAGACCAACTCAAATCTCTCAGTGGATGAGGCTGATAATGGAGAAGAGGCAAAGACTCGAGTGCAGCTCGACAGTGTATTTGACGAGTTTGGAGATATCTTCTGTGATAGACTTACAGATGTACCATTAGTTTGCAGCTCCAACAAAGAGCTGCAAGAAAGTGAGCTTCATTCGTACTTCAATGGCACATTTCATCGTTTCAAAGCAGCCTGAAAGTGTGCTTCATGTCATTGTTAATATCATCGTATTGAACATGTTAATATGGGAGTTAGAACTCGACT 1258 44.99 MEATALVLKNEENLRICWTEGQTQAIRRVKRRRRDPAAATTGQTNKQQSPKQQSDQAPTTTMKRSSRFRGVSRHRWTGRFEAHLWDKLSWNMTQKKKGKQVYLGAYDEEESAARAYDLAALKYWGVTTITNFPISEYEKEIEIMQTMTKEEYLASLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVYGNKYLYLGTYGTQEEAARAYDMAAIEYRGINAVTNFDWSNYMAWLKPPPPPSATQSEAHMATDPHNELCNSSSIPADETSLFKNHHYDIDSFHSLQKQELLESCNAPLNAYARSSSASALDLLLRSSIFKKLVETNSNLSVDEADNGEEAKTRVQLDSVFDEFGDIFCDRLTDVPLVCSSNKELQESELHSYFNGTFHRFKAA 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 82199153 82203153 - XM_039048868.1 Bhi11g03021 51733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g03021 393 ProSiteProfiles AP2/ERF domain profile. 169 227 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 SMART rav1_2 67 139 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 SMART rav1_2 169 233 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 ProSiteProfiles AP2/ERF domain profile. 67 133 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 MobiDBLite consensus disorder prediction 26 71 - -
Bhi11g03021 393 Pfam AP2 domain 168 219 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 Pfam AP2 domain 66 125 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 10 378 - -
Bhi11g03021 393 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 10 378 - -
Bhi11g03021 393 SUPERFAMILY DNA-binding domain 66 135 IPR016177 GO:0003677
Bhi11g03021 393 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 PRINTS Ethylene responsive element binding protein signature 209 229 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 SUPERFAMILY DNA-binding domain 168 229 IPR016177 GO:0003677
Bhi11g03021 393 MobiDBLite consensus disorder prediction 38 66 - -
Bhi11g03021 393 CDD AP2 66 135 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 CDD AP2 168 229 IPR001471 GO:0003700|GO:0006355
Bhi11g03021 393 Gene3D AP2/ERF domain 168 228 IPR036955 GO:0003700|GO:0006355
Bhi11g03021 393 Gene3D AP2/ERF domain 66 135 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01355 Bhi-Chr4:34174496 Bhi11g03021 Bhi-Chr11:82199153 9.33E-114 dispersed
Bhi07g00626 Bhi-Chr7:24817937 Bhi11g03021 Bhi-Chr11:82199153 2.76E-98 dispersed
Bhi09g00550 Bhi-Chr9:11614910 Bhi11g03021 Bhi-Chr11:82199153 5.48E-07 dispersed
Bhi11g03021 Bhi-Chr11:82199153 Bhi02g00752 Bhi-Chr2:15100969 1.30E-09 dispersed
Bhi11g03021 Bhi-Chr11:82199153 Bhi09g03193 Bhi-Chr9:81862096 3.76E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2549 PF00847 AP2 2.90E-13 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g03021 - - csv:101210782 734.947