Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi11g03023 | TTAACAGCTTAGAAAAATAAAAGAAGAATAAAGAAACTGAGGCTTGGTTAACATTAATTTTGGTCTGGCAAGGTCTTGAATAAACTTAGGTCGTTTACCTATTTGGGGTTCTTTCTTAGACCTTGACCAGCCCAAAAAGCTTGCTTTCAGAAAGAACCTCCAAAAAAAATTAAAAAAGGGTCCATTTTTGCTTGGGTCTTCATCAAGAAGAAGAAGAAGAAGATGGCAGGTTGTTGTAGTATTAAGGTTGTGATGTTTTTGGTTTCAATGGCTGTTCTTATGCCAACTCTAAGAGCTGGCATTGCTGAATATGATGATTATTTGCTCCAAAAGGCTGAAGAAGCCAAACAAGCTGCTCTTGAATCTTTCCATCCTGATCCCATGAATGTCACTGATCATTTCAACGAACATGTTCATTTGGCTTTGGAGGGAATAGAGGGAAGCAATAGCACTAGGAGGAGTCTGAAGAAATATAACGGTCCTTGCATGGCAACAAACCCGATTGACCGATGCTGGCGTTGTGACCGAAATTGGGCCATGAACCGTAAGAAGCTTGTCTCTTGCGTGCTTGGTTTCGGCCGAAAAACCACCGGTGGCTTGAGAGGACGTTTCTATGTTGTGACCGATCCATCGGATAACGACGTTATAAACCCTAGACGTGGAACCCTCCGACACGCCGCTATTCAAAAGCGGCCACTATGGATCATTTTTGGACGCAGCATGATCATCAGGTTGTCCAAGGAGCTGTTGATCACCAGCCACAAGACCATTGATGCTCGCGGTGCCAATGTTCACATTGCCTATGGTGCTGGTCTTAGCATTCAATTTTCCCGGAATGTGATCATCCACGGCCTTCACATCCACCACGTCGTTTCAGCTCGCGGTGGCATGATCAGAGACTCCGCTGACCATGTCGGCCTTCGAACCGTTAGTGACGGAGACGGTATCTCCATCTTTGGATCATCCAACATCTGGCTCGATCATCTCTCTATGTCTAATTGCCAAGATGGACTCATCGACGCAATCCAAGGCTCCACCGCAATCACCATCTCAAACTCTCATTTCACTCATCACAACGACGTGATGTTGTTCGGTGCAAGTGATTCTTATCAAGGCGACTCAATCATGCAAGTGACCGTCGCGTTCAACCATTTCGGAAAGGGATTGGTGCAGAGAATGCCAAGATGCAGATGGGGTTTCTTCCATGTCGTCAACAACGATTACACTCATTGGCTCATGTACGCCATTGGCGGCAGTCAACATCCCACCATTATCAGTCAAGGAAACCGTTTCATCGCCCCACCAAACCCTGCTGCAAGACAGGTTACAAACAGAAACTATGCAACGGAGAGTGTATGGAGAACATGGACATGGAGATCGGAAGGGGATTTGATGATGAATGGAGCATACTTCATTCAGTCTGGGAATCCAAGCAAACGAAGGCCATACAGCAGGTTCGATATGATCAAGGCTAAGCCTGGCACCTTTGTTAGAAGGCTTACTCGCTTCTCTGGCTCACTCAACTGTTATGTTGGTCGCCCATGCTAAATCCAACAACCAACCAAATTTAATTTTTATTTCAAGCTTTAATTTACATTCGATGTTCTGCAACAAAAAAAAACATGGCGAAGAATAAGAGAAAGATAGAAGATGATAGAGGATGAAGTATTATGAGAGCAGCAGCAAAAATGGAATCTTTGACAAAAAAGATTAAATAAAAACCAAAGATCAGCAAAAGGGAAAGAACACAGAGATTGATGATCGACAACTTGAAGAAGGCTTGAAGAAGGAAGTTCATTTGTTTTTAATTATTATTTTGTATTGGAG | 1827 | 43.68 | MAGCCSIKVVMFLVSMAVLMPTLRAGIAEYDDYLLQKAEEAKQAALESFHPDPMNVTDHFNEHVHLALEGIEGSNSTRRSLKKYNGPCMATNPIDRCWRCDRNWAMNRKKLVSCVLGFGRKTTGGLRGRFYVVTDPSDNDVINPRRGTLRHAAIQKRPLWIIFGRSMIIRLSKELLITSHKTIDARGANVHIAYGAGLSIQFSRNVIIHGLHIHHVVSARGGMIRDSADHVGLRTVSDGDGISIFGSSNIWLDHLSMSNCQDGLIDAIQGSTAITISNSHFTHHNDVMLFGASDSYQGDSIMQVTVAFNHFGKGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIAPPNPAARQVTNRNYATESVWRTWTWRSEGDLMMNGAYFIQSGNPSKRRPYSRFDMIKAKPGTFVRRLTRFSGSLNCYVGRPC | 441 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 82254620 | 82256722 | - | XM_039049883.1 | Bhi11g03023 | 51735 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 114 | 131 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 138 | 163 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 174 | 190 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 238 | 259 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 318 | 337 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 340 | 359 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 382 | 406 | IPR018082 | - | |
Bhi11g03023 | 441 | PRINTS | Pollen allergen Amb family signature | 412 | 435 | IPR018082 | - | |
Bhi11g03023 | 441 | SUPERFAMILY | Pectin lyase-like | 92 | 431 | IPR011050 | - | |
Bhi11g03023 | 441 | Gene3D | - | 91 | 434 | IPR012334 | - | |
Bhi11g03023 | 441 | PANTHER | PECTATE LYASE | 7 | 441 | - | - | |
Bhi11g03023 | 441 | Pfam | Pectate lyase, N terminus | 27 | 81 | IPR007524 | GO:0030570 | |
Bhi11g03023 | 441 | Pfam | Pectate lyase | 179 | 357 | IPR002022 | - | |
Bhi11g03023 | 441 | PANTHER | PECTATE LYASE 18-RELATED | 7 | 441 | IPR045032 | GO:0030570 | |
Bhi11g03023 | 441 | SMART | amb_all | 166 | 363 | IPR002022 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi04g01228 | Bhi-Chr4:30098174 | Bhi11g03023 | Bhi-Chr11:82254620 | 0 | dispersed | |
Bhi08g01413 | Bhi-Chr8:41879424 | Bhi11g03023 | Bhi-Chr11:82254620 | 0 | dispersed | |
Bhi08g01414 | Bhi-Chr8:41879427 | Bhi11g03023 | Bhi-Chr11:82254620 | 0 | dispersed | |
Bhi11g03023 | Bhi-Chr11:82254620 | Bhi12g01517 | Bhi-Chr12:49105909 | 2.72E-162 | dispersed | |
Bhi11g03023 | Bhi-Chr11:82254620 | Bhi07g01600 | Bhi-Chr7:45519784 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi11g03023 | K01728 | - | csv:101202789 | 828.165 |