Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi11g03048 TTTTTAAATGGTCTAAATTTATAAAGTAAAATGTCAAAAAGACTAAACTGTCAATTAAGCCGAAACGAAGCTCACCGTCGCCGGTGCAAAGAAGAGAAAATGTCAGATGATCGCAGTTTCAATCCAATCAGAATCCAACGAATGTCTCTATGCTTCTCCGGAACCAAACTCCAAAGACTTCGCGAGAAGAAAGAAGAAAACGCACAGACGATTTTCCATTTTCTAAATATAGAAACACAATCCTGCGAGAAAATTGGATCTCCAATGGAAGAAAAAGAAAAAGAAAATGAATCTCAAACAATTTCTTCCCACTGGATGCGACCATTTCAAACCCTACCTGTTGTCTCTCTCCGGAATCGAAACCCAGAAATTTTTTCTCCAGGAACAGAGGTTTTGATTTGCTGTAGTCGAATACCAGAATGATCTAATTGGAGAAGAGAACGTCCGAGATCGGAAGCGCCATCGGATCGGTACCGTTTGAATATCTCGGAGATCAACTCTGGCATCTATGTTCCCCATTGTCACAAAATGTTCGATTGTGGTGGATACAAGTCGCAGTACATCGCCGGTCACAAGGAGAAATTCGTGAGGTTAGATGATTTGGATTCAAATTTGTCAATGCCCTCCGGAACAAGCAAGATGAAGAAATGCCGATTCAACCTAGAAGGCCTCCCACTGCCATTCATCAGCCGATCGAAGCCTCGAAATGCGTCGAAATCGTTCCGAAGGGGAGTCCAAATGAGCTCTGACGGAATCATAACCCTAGGTCGGTCGCTCCGCTCCGGCGTGTCTAAAGTCATCTTCCCGGAGGATCTGAAAGTATCGGAACAGAAAATCTTCGATCCGCAGGACAAATCGCTCCTCTTCTGGAATAAGCTATTCGTGTTGTGCTGTATCCTCGCCGTCTCTGTCGATCCGCTCTTCTTCTACCTCCCCGTGTTCAACCATGCCTCTTACTGCCTCGGAATGGACACTCAGCTCGCCGTCACGACCACCACCGTGCGTACGGCCATTGATGTTTTCTACTTGATTCGCATGGCGTTTCAGTTCCGAACGGCTTACATTGCGCCGTCGTCGAGGGTGTTTGGTCGCGGCGAGCTTGTGATCGATCCGACGGAGATCGCGCAGCGGTATCTTCAGCGCTACTTTATCGCTGATTTTCTCTCTGTTCTTCCTGTTCCTCAGGTGGTGGTGTGGAGGTTTCTTCACAGGTCAAAAGGCTCAGAAGTTTTGGCCACAAAACAAGCATTGTTAAACATAGTGTTTCTTCAGTATATTCCCAGATTTGTTAGATTTATACCTTTGAACATAGAGCTTAAGAAGACAGCAGGTGTTTTTGCTGAAAGTGCTTGGGCTGGTGCTGCTTACTATCTCCTCCTGTACATGCTCGCCAGTCATATAGCAGGAGCATTCTGGTATTTGCTGGCAGTGGAGAGGAACGATACATGTTGGCGCCAAGCATGCAAAAGCACCGGAAAGTGCAACATTAACTTTTTGTATTGTGGGAATAAGCACATGTCCGGGTATAAGGAGTGGAGAAATATAAGCGTCGATGTTCTCACTAAGAAATGCACCGCCATCGGAGACAATTTACCTTTCAACTATGGCATTTACACTCAGGCCATTTCCTCGGGCATTGTTCAATCCAGGACTTTCTTCTCCAAGTTCTGCTATTGCTTGTGGTGGGGCTTGCAAAATTTAAGTACACTCGGTCAGGGGCTGCTCACCAGTACCTATCCTGGGGAGGTTATCTTTTCTATCCTAATTGCAATTTCTGGGCTCCTCCTTTTTGCGCTCTTGATTGGAAACATGCAAACATACCTTCAATCTCTAACCGTCCGACTTGAAGAGATGCGCATTAAGAGGAGAGACTCTGAGCAATGGATGCACCATCGACTGCTTCCGCCAGACTTGAGAGAAAAGGTTAGGCGCTACGATCAGTACAAATGGCTAGAAACCAGAGGCGTTGATGAAGAGAGCTTGGTTCAAAGTCTGCCTAAAGATCTTAGGAGAGACATTAAACGACATCTCTGTCTCAATTTGGTTAGAAGGGTCCCTTTATTTGCAAACATGGATGAGCGTCTACTAGACGCAATATGCGAGAGGCTGAAACCAACATTATACACAGAGAACACATACATCGTACGAGAAGGCGATCCAGTCGACGAAATGCTCTTCATAATCCGTGGCCGTCTAGAGAGCGTCACAACCGACGGCGGCCGTAGCGGCTTCTACAACCGCGGCGTATTAAAAGAAGGCGATTTCTGTGGTGAAGAGCTTTTAACATGGGCTCTCGACCCCAAGTCCGGCTCCAACCTCCCCTCTTCCACTCGCACTGTCCATGCCCTCACCGAGGTTGAAGCCTTCGCCTTAGAAGCCGAGGAGCTCAAGTTCGTGGCCAGCCAGTTCCGGCGCCTGCACAGCCGGCAGGTTCAACACACCTTCAGATTCTACTCTCAGCAATGGCGAACCTGGGCATCGTGTTTTATACAGGCGGCGTGGCGGCGGTACTTGAAGCGGAAGATTGCGGAGCTGCGACGGAAGGAGGAGGAGGAAGAAGATGCTGCGGCGGTTGCAGCTGCATTTAACACGTCAAGGCTCGGGGCTACGATTTTGGCGTCGAGATTTGCGGCAAATGCGCTTAGAGGGCATCGATTGAGGAATATGAGTGGGAGGAGCTTGATTAACTTGCAGAAGCCGGCGGAACCTGATTTTTCTGTGTATAAAGGAGAGTAAAGTCAATTAAATGTAATGTAAAGGGTCCTTTTTAATTTCTCTCTCTTCTACACACATATGGTGGCTTCTTTCTAAACGCCCCTAGCTTTTAATTATGTTATATATATGGTTAAATTATATCAATGTGCATTCTTTTTTTTCTTTTTTTA 2885 46.69 MFDCGGYKSQYIAGHKEKFVRLDDLDSNLSMPSGTSKMKKCRFNLEGLPLPFISRSKPRNASKSFRRGVQMSSDGIITLGRSLRSGVSKVIFPEDLKVSEQKIFDPQDKSLLFWNKLFVLCCILAVSVDPLFFYLPVFNHASYCLGMDTQLAVTTTTVRTAIDVFYLIRMAFQFRTAYIAPSSRVFGRGELVIDPTEIAQRYLQRYFIADFLSVLPVPQVVVWRFLHRSKGSEVLATKQALLNIVFLQYIPRFVRFIPLNIELKKTAGVFAESAWAGAAYYLLLYMLASHIAGAFWYLLAVERNDTCWRQACKSTGKCNINFLYCGNKHMSGYKEWRNISVDVLTKKCTAIGDNLPFNYGIYTQAISSGIVQSRTFFSKFCYCLWWGLQNLSTLGQGLLTSTYPGEVIFSILIAISGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPPDLREKVRRYDQYKWLETRGVDEESLVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPTLYTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFYNRGVLKEGDFCGEELLTWALDPKSGSNLPSSTRTVHALTEVEAFALEAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWASCFIQAAWRRYLKRKIAELRRKEEEEEDAAAVAAAFNTSRLGATILASRFAANALRGHRLRNMSGRSLINLQKPAEPDFSVYKGE 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 82817683 82822708 - XM_039049937.1 Bhi11g03048 51760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi11g03048 735 Pfam Ion transport protein 113 438 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bhi11g03048 735 Gene3D Helix hairpin bin 438 502 - -
Bhi11g03048 735 CDD CAP_ED 511 642 IPR000595 -
Bhi11g03048 735 ProSiteProfiles cAMP/cGMP binding motif profile. 511 641 IPR000595 -
Bhi11g03048 735 SUPERFAMILY Voltage-gated potassium channels 106 433 - -
Bhi11g03048 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 8-RELATED 13 732 - -
Bhi11g03048 735 Gene3D Jelly Rolls 509 629 IPR014710 -
Bhi11g03048 735 Coils Coil 659 679 - -
Bhi11g03048 735 SUPERFAMILY cAMP-binding domain-like 441 631 IPR018490 -
Bhi11g03048 735 Pfam Cyclic nucleotide-binding domain 532 622 IPR000595 -
Bhi11g03048 735 Gene3D - 116 436 - -
Bhi11g03048 735 ProSiteProfiles IQ motif profile. 647 676 IPR000048 GO:0005515
Bhi11g03048 735 SMART cnmp_10 511 642 IPR000595 -
Bhi11g03048 735 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 732 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi06g01405 Bhi-Chr6:42551630 Bhi11g03048 Bhi-Chr11:82817683 0 dispersed
Bhi11g03048 Bhi-Chr11:82817683 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi11g03047 Bhi-Chr11:82817683 Bhi11g03048 Bhi-Chr11:82817683 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi11g03048 K05391 - csv:101221166 1360.9