Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00014 ATGGCTCAAAAGCTTCATTTTTCCATCATTCTAATTTCTTTGTTCATCCTCTCATCAATTTCCCTATGTTTCTCCACCAAACCTAACAACAATGCCATAGATTTATGGTGCAGCCGAATGCCATATCCCGACGTATGCAAACACTTCTTCAATGGCCAATTCGACCCAAAAAAGCTTTCAGAATTCAAAAAAACAGCTCTTAAAATCGCCATGGATAGAGCTATAAGAGCTGAAACACTCACAAAAGAGTTAGGCAAAAAATGCCGTAACGAAAAAGAAAGAGCTGCATGGGCTGACTGTTTGGAGCTTTACCAAACCACAATCCTCCACCTCAACAAAACCTTCTCCGACGAAAAATGCTCTGACTTCGACATCCAAACATGGCTCAGCTCTGCCTTGACCGACCTCGAAACGTGCCGTGCCGGGTTCATCGACCTTAAGATAAAAGATTACGATGTGGTTTTCCCGTTTTTGGCGAACAATAATGTGACAAAGCTTATTAGTAATAGTTTGGCAATGAATAACTGCTCCGAGAGTGATGTGGGGTATAAGAGTAATGAAGGGTTTCCGAAGTGGGTTCGGCGTGGGGACCGGCGGCTGTTGCAGGCGGCGGAGCCTAAGGCGGATTTGGTGGTGGCACAGGACGGGTCGGGGAATTATAGGACGGTGCAAGCGGCGGTGGATGCGGCGGGGAAGAGGAAAGGGAGTGGGAGATTTGTGATACATATAAAGAGGGGAGTTTATAAAGAGAATGTAGTGATAAAGGTGAAGAATTTGATGCTTGTTGGAGATGGATTGAGGTATACAATTATTACTGGAAGTAGAAGTGTTGGTGGTGGTTCTACTACTTTCAACTCTGCTACTGTTGCTGTGACCGGTGAACGTTTCATTGCCCGTGGCATCACATTCCGCAACACCGCCGGACCTGAAAACCACCAAGCGGTAGCCCTTCGGTCAGGCTCCGATCTCTCAGTCTTCTTCCGGTGCGGTTTCGAAGGATACCAAGACACTCTCTACGCCCATTCACAAAGACAATTCTATAGAGAATGCTACATTTACGGCACGGTGGATTTCATCTTCGGCAACGCCGCCGTAGTTCTCCAGAACTGCATGATCTACGCAAGAAAACCAATCCCAGGGCAGCAATGCGTCGTCACCGCCCAAGGCCGAACCGACCCAAACCAAAACACAGGGATCTCAATCCACAATTCGAGAGTGATGGCGGCGGACGACCTAAAACCGGTCGTAGGGTCGGTTAGAACCTACTTGGGGAGGCCATGGAAGGAGTACTCTCGCACAGTTTACTTACAGAACTTCATGGATAACTTGGTGAATCCAGCAGGGTGGTTGGAATGGAGTGGTAATTTTGCATTGAATACATTGTATTATGGAGAGTTTAAGAATTTTGGGCCAGGTTCTTCTACTGCTAAGAGAGTGAAATGGAAGGGTTATAGAGTGATAACAAGTGCTACAGAAGCATCAAAATTTACTGTTGGGAATTTCATTGCTGGGAGATCATGGCTGCCTGGAACTGGAGTGCCATTCACTGCTGGGCTTTGA 1560 46.79 MAQKLHFSIILISLFILSSISLCFSTKPNNNAIDLWCSRMPYPDVCKHFFNGQFDPKKLSEFKKTALKIAMDRAIRAETLTKELGKKCRNEKERAAWADCLELYQTTILHLNKTFSDEKCSDFDIQTWLSSALTDLETCRAGFIDLKIKDYDVVFPFLANNNVTKLISNSLAMNNCSESDVGYKSNEGFPKWVRRGDRRLLQAAEPKADLVVAQDGSGNYRTVQAAVDAAGKRKGSGRFVIHIKRGVYKENVVIKVKNLMLVGDGLRYTIITGSRSVGGGSTTFNSATVAVTGERFIARGITFRNTAGPENHQAVALRSGSDLSVFFRCGFEGYQDTLYAHSQRQFYRECYIYGTVDFIFGNAAVVLQNCMIYARKPIPGQQCVVTAQGRTDPNQNTGISIHNSRVMAADDLKPVVGSVRTYLGRPWKEYSRTVYLQNFMDNLVNPAGWLEWSGNFALNTLYYGEFKNFGPGSSTAKRVKWKGYRVITSATEASKFTVGNFIAGRSWLPGTGVPFTAGL 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 343394 346488 + XM_039019956.1 Bhi12g00014 51826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00014 519 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 175 IPR006501 GO:0004857
Bhi12g00014 519 Gene3D - 203 519 IPR012334 -
Bhi12g00014 519 CDD PMEI-like_3 35 175 - -
Bhi12g00014 519 ProSitePatterns Pectinesterase signature 1. 235 254 IPR018040 -
Bhi12g00014 519 PANTHER PECTINESTERASE 8 518 - -
Bhi12g00014 519 SUPERFAMILY Pectin lyase-like 206 518 IPR011050 -
Bhi12g00014 519 PANTHER PECTINESTERASE 8 518 - -
Bhi12g00014 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 176 IPR035513 -
Bhi12g00014 519 ProSitePatterns Pectinesterase signature 2. 352 361 IPR033131 -
Bhi12g00014 519 SMART PMEI_2 28 173 IPR006501 GO:0004857
Bhi12g00014 519 Pfam Plant invertase/pectin methylesterase inhibitor 32 173 IPR006501 GO:0004857
Bhi12g00014 519 Pfam Pectinesterase 209 504 IPR000070 GO:0030599|GO:0042545
Bhi12g00014 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 176 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01220 Bhi-Chr1:24957552 Bhi12g00014 Bhi-Chr12:343394 0 dispersed
Bhi11g00345 Bhi-Chr11:7984426 Bhi12g00014 Bhi-Chr12:343394 2.16E-147 dispersed
Bhi11g00682 Bhi-Chr11:16994903 Bhi12g00014 Bhi-Chr12:343394 0 dispersed
Bhi12g00014 Bhi-Chr12:343394 Bhi12g00925 Bhi-Chr12:27823274 2.55E-168 dispersed
Bhi12g00014 Bhi-Chr12:343394 Bhi01g02828 Bhi-Chr1:70160086 1.67E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00014 K01051 - csv:101216005 919.457