Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00042 TTCTCTCCATTCTTACACCATTTACACCTTCCTCTTTCATTCCCATTTTCTCTCTATCTTTTTCTTTTCTCCATTAATCTTAATTCCATAATTCCATTTTTTCACTCTGGATTTTCTCATTCAACCCATTTTTTTAAGCTTCTAAACTAAATTAGGCCTGGCTTCCTTCTCTTCAACAAACCTTCCTTAACTTCACATTTATAAAAGCTTCCAAATCATGTAATTTTAGACCCCTTTCTCAATCACCCCCTTCAAAAAAATCCCAAAAAAAAACTTTTTTTTTTAAAAAAAAAAATTAGATGAATTTCTTTTGTATCCCAAAGTAAAAATCTAGTGTTTATTATCCTGGCTAAGCTTCCAATTCTGCCTTAGAACAACTTTTATAAAAAACCCCAAATCATGTAACTTTGTTTTTTAAAATTCCCATCATTCAAACACCCAAAAAACCAAAAAAAAATTGATTTTTTTTAATACCCAGAAGTTTGTTTATTGAAAAAAAAAAAAAAGAAAAAAAAATGCCGGAATCGGAAAGTGGAACACCGGTGGCGTCGGCGCCGGCGACCCCAGGGACGCCGGGAGGGCCGCTGTTTTCCGGGCTCCGAGTGGATTCTCTATCGTACGATCGGAAGTCAATGCCGCGGTGTAAGTGCTTGCCCGTGAATGCTCCCACGTGGGGCCAACCTCACACGTGCTTCACTGACTTCCCTGCTCCCGATGTCTCTCTCACCCGCAAGCTAGGAGCAGAATTTGTGGGAACATTCATCTTGATATTTGCTGCGACGGCAGGGCCCATTGTCAACCAAAAATACAACGGCGTCGAGACTCTGATCGGAAACGCTGCGTGTGCCGGGCTGGCGGTGATGATCGTAATTCTGTCGACGGGACACATTTCTGGAGCCCATCTGAACCCGTCGCTGACCATTGCCTTTGCGGCCCTCCGCCACTTCCCTTGGGTGCAAGTCCCCGCCTACATCGCTGCCCAGGTCTCCGCCTCCATTTGCGCCTCCTTCGCTCTCAAAGGTGTTTTTCACCCTTTCATGTCCGGTGGCGTCACTGTCCCCTCCGTCAGCACTGGCCAGGCCTTCGCTCTTGAATTTATCATCACTTTCAATCTCTTGTTTGTCGTCACCGCAGTCGCCACTGACACTCGTGCGGTTGGAGAGTTGGCTGGAATTGCAGTCGGAGCTACAGTGATGCTTAATATTCTTGTTGCTGGGCCCTCAAGCGGTGGTTCGATGAACCCTGTTCGAACTTTGGGCCCCGCCGTGGCTGCCGGAAATTATAGAGCATTATGGGTGTATCTGGTGGCGCCGACGCTAGGGGCAATAGTCGGCGCTGGAACTTACACCGCTGTGAAGCTGAGAGAAGACGAAGTAGAAGCGCCGTCGCAGGTAAGGAGCTTCCGGCGTTGAAATCAGGCGGTGGGCATTGGCTAAGTATGAGTCTATGACATAAAATGTGTGTGTGTCAGTAGAAAAAATAAAGATAAGAAAAAGGCGATTGGGGATTGATGAGACTGGAAGACCATATCGTCTTGATTGCTACGTTTGTGTCTGTTTATATGCGTCATTGCTTCTTCTTGCCAACTTTGAATTGAGTTCTTTTTAGGGTTTCTTTTGTCGAAAACACACACTTCTGTGCTTTCTCTTTGCTTGTGATCAATATGTAATTGACATCTTGTCTTTGTGATATATATATTATAATGTATGCCCTTGTGATATATATATTA 1729 44.65 MPESESGTPVASAPATPGTPGGPLFSGLRVDSLSYDRKSMPRCKCLPVNAPTWGQPHTCFTDFPAPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYNGVETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSSGGSMNPVRTLGPAVAAGNYRALWVYLVAPTLGAIVGAGTYTAVKLREDEVEAPSQVRSFRR 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 846001 852297 + XM_039019597.1 Bhi12g00042 51854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00042 298 MobiDBLite consensus disorder prediction 1 24 - -
Bhi12g00042 298 PRINTS Major intrinsic protein family signature 72 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 PRINTS Major intrinsic protein family signature 111 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 PRINTS Major intrinsic protein family signature 148 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 PRINTS Major intrinsic protein family signature 192 210 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 SUPERFAMILY Aquaporin-like 69 287 IPR023271 -
Bhi12g00042 298 ProSitePatterns MIP family signature. 129 137 IPR022357 -
Bhi12g00042 298 PANTHER AQUAPORIN NIP2-1 9 296 IPR034294 -
Bhi12g00042 298 PANTHER AQUAPORIN NIP5-1 ISOFORM X1-RELATED 9 296 - -
Bhi12g00042 298 Pfam Major intrinsic protein 68 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00042 298 Gene3D Glycerol uptake facilitator protein. 64 294 IPR023271 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03636 Bhi-Chr1:92160687 Bhi12g00042 Bhi-Chr12:846001 7.60E-120 dispersed
Bhi11g02999 Bhi-Chr11:81222850 Bhi12g00042 Bhi-Chr12:846001 4.25E-69 dispersed
Bhi11g03000 Bhi-Chr11:81335315 Bhi12g00042 Bhi-Chr12:846001 8.84E-62 dispersed
Bhi12g00042 Bhi-Chr12:846001 Bhi12g00044 Bhi-Chr12:874822 3.08E-140 dispersed
Bhi12g00042 Bhi-Chr12:846001 Bhi12g00043 Bhi-Chr12:874819 3.08E-140 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00042 K09874 - csv:101212651 563.148