Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00044 TCAAAATAAAAAGAAGAAAAATTAAAAAAAAAGCTGTAACGTTAAGAATACTCTTTTCTCCTTTAAATAGAAAGCGAATGATCACTATTAATTGCATAATATTTCAGCTATGAATCTCCAACGACAATTTGAGTAAAACCTAGAGCTTGATTTTATCCAATAAAAGAAAAGAAAAAGAAGCCATTATCTTATCGTACGATCAGAAGCCAATGTCGCAATTCGACTGCATACACGTGGACGGCCCAAAGCAGACCCAAATTCTTGATCTCTCTCTCACTCGAAAGGTGGGAGCAGAATTTATAGGCACATTCATCCTCATATTTGCTGCAACTGCTGCACCCATCATCAACCAAAAGTACAACGCTGCCATATCACTGATCGGAAACGCCGCATGCGCCGGCCTAGCAGCAATGATCGTAATTATCTCGACAAAACACATCTCCGGCGGCCACCTCAACCCTTCGCTAACCATCGCCTTGGCTGTCGTCCGCCACTTCCCTTGGGCCCGTGTCCCCGCCTACATCGTCGCCCAGGTCTCTGCTTCCATCTGTGCCTCCTTCGCTCTTAAAGGAGTTTTTCACCCTTTCATGTCCGGCGGCGTTACCGTCCCCTCCGTTGGCACTGGCCAAGCCTTTGCTCTCGAATTCCTCATCACTTTCAATCTCTTGTTTGTTGTCACTGCCATTGCTACTGATGCTCGAGCCGTTGGAGAGTTGGCCGGAATTGCAGTCGGAGCTACGGTGGTGCTCAACATTCTTATCGCTGGGTCATCCACTGGTGGTTCAATGAACCCAGTGAGGACTTTAGGCCCTGCCGTGGCCGCCGGAAATTACAGAGAACTTTGGTTGTACATGGTGGCTCCTACACTTGGGGCAATTGTCGGCGCCAAAACCTACACCCTCGTGAAGCAGAAAGACGATGAAATGGATGTTCCATCAGAGGTGAGCAACTTCCGTCGATGAAAATGGGTGGTCGATGTATTTGTATTTAAATGTTGTGTATTATGATAATTAGTTTTGAAATGATAGATATATGTTAGACAGAATGAATTCATCATACATTTATGGGTTGAGTCTCACTTAACTTCAATGCATTTAAATATTATGATATAACAAAGTCATTTTAGTTCTCAAAAA 1136 44.19 MSQFDCIHVDGPKQTQILDLSLTRKVGAEFIGTFILIFAATAAPIINQKYNAAISLIGNAACAGLAAMIVIISTKHISGGHLNPSLTIALAVVRHFPWARVPAYIVAQVSASICASFALKGVFHPFMSGGVTVPSVGTGQAFALEFLITFNLLFVVTAIATDARAVGELAGIAVGATVVLNILIAGSSTGGSMNPVRTLGPAVAAGNYRELWLYMVAPTLGAIVGAKTYTLVKQKDDEMDVPSEVSNFRR 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 874822 880752 + XM_039050894.1 Bhi12g00044 51856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00044 250 SUPERFAMILY Aquaporin-like 19 238 IPR023271 -
Bhi12g00044 250 Gene3D Glycerol uptake facilitator protein. 9 245 IPR023271 -
Bhi12g00044 250 PANTHER AQUAPORIN NIP2-1 17 246 IPR034294 -
Bhi12g00044 250 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Bhi12g00044 250 Pfam Major intrinsic protein 21 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00044 250 PANTHER AQUAPORIN NIP5-1-RELATED 17 246 - -
Bhi12g00044 250 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00044 250 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00044 250 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00044 250 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00044 250 PRINTS Major intrinsic protein family signature 175 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bhi12g00044 250 PRINTS Major intrinsic protein family signature 212 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00042 Bhi-Chr12:846001 Bhi12g00044 Bhi-Chr12:874822 3.08E-140 dispersed
Bhi12g00044 Bhi-Chr12:874822 Bhi09g00178 Bhi-Chr9:4006901 1.75E-31 dispersed
Bhi12g00043 Bhi-Chr12:874819 Bhi12g00044 Bhi-Chr12:874822 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00044 K09874 - csv:101212485 404.831