Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00059 ATGGAGCCGCCGGAGCCAGAGGAGGAAGCTGGTGGTGGTGGTTCTAATAGCAGCGGCGGAGGCGGAGGCGGAGGCGGAGCAAGAGAAGTTGAGAGGGAACATATGTTTGACAAAGTGGTGACTCCAAGTGATGTAGGGAAATTAAACCGTCTTGTAATTCCAAAGCAACATGCTGAGAGATTTTTCCCTTTAGATTCATCAACAAACGACAAGGGTTTACTGTTAAACTTCGAAGATCGTAACGGCAAATCATGGCGATTCCGTTACTCTTACTGGAACAGCAGCCAAAGCTACGTTATGACGAAAGGTTGGAGTCGATTCGTCAAAGAGAAACGTCTCGACGCCGGCGATATCGTCTCGTTTCAACGTGGGGTTGGTGAAATTGGAAGAGATCGTCTTTACATTGACTGGCGTCGCCGTCCTGAACTCCCCATCCACCACCACCATCATCACTACCCCACCACCACCCTCCGACCGAGTATCGTCGTCCCGGGCGGCAGCGGTGGTGCTACCTCTTGGGGGCCATTAGTCTGGCAGCCCCTCGGCACAACAACAGCTGGATACCATCATCATCCAGCTGCCGTAGTGCCGCGGGACCACACACATTTGTCCCGAATAAACAACAACAATAACAACAACGGGAATGGGAATGGTATGTGTTGTCCCTATGGATATGGGAGTGTTGAAACAACAACTTCTGGGTTGGTGTATTTGAGGACAGAATTAGGAGGAAGATCAAGAAGAGTAGCTCCAAGATTAGGGGAAGAGGAATTGGAGTTGGAAATGGATCGAGGGAATAATAGTTATCAGATGCAGCAGGAGTACTGTAGTAATGGTGGGGGTGCTTCAATGGTGGTCCTTCAAGGAAATTTGCAAAGTGATCATTACCAAAGTTTAGATAATGGATCTGGTGAGTTTAAATCTTTTAACTACTAA 936 48.4 MEPPEPEEEAGGGGSNSSGGGGGGGGAREVEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRGVGEIGRDRLYIDWRRRPELPIHHHHHHYPTTTLRPSIVVPGGSGGATSWGPLVWQPLGTTTAGYHHHPAAVVPRDHTHLSRINNNNNNNGNGNGMCCPYGYGSVETTTSGLVYLRTELGGRSRRVAPRLGEEELELEMDRGNNSYQMQQEYCSNGGGASMVVLQGNLQSDHYQSLDNGSGEFKSFNY 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1680180 1683033 - XM_039051310.1 Bhi12g00059 51871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00059 311 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 23 200 - -
Bhi12g00059 311 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 23 200 IPR044800 GO:0003700
Bhi12g00059 311 ProSiteProfiles B3 DNA-binding domain profile. 36 141 IPR003340 GO:0003677
Bhi12g00059 311 Pfam B3 DNA binding domain 36 140 IPR003340 GO:0003677
Bhi12g00059 311 CDD B3_DNA 34 123 IPR003340 GO:0003677
Bhi12g00059 311 SUPERFAMILY DNA-binding pseudobarrel domain 33 142 IPR015300 -
Bhi12g00059 311 SMART B3_2 36 141 IPR003340 GO:0003677
Bhi12g00059 311 Gene3D - 30 152 IPR015300 -
Bhi12g00059 311 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02351 Bhi-Chr11:63751937 Bhi12g00059 Bhi-Chr12:1680180 1.04E-48 dispersed
Bhi11g02352 Bhi-Chr11:63753416 Bhi12g00059 Bhi-Chr12:1680180 1.29E-48 dispersed
Bhi12g00059 Bhi-Chr12:1680180 Bhi12g02268 Bhi-Chr12:72711789 1.03E-61 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2563 PF02362 B3 5.30E-29 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00059 - - csv:101211271 444.891