Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00098 TCCAATTGTATAGTTTAATTCAATCGGTACAGAAAGAACACAACGAAGGACGACGACTTCGACAATTCAACGAATCCTATTCCTTTTTCATGTGTTAACCGGACCCTTTTCTTTTCATTCGCTTAATTTCAACTCTCAATTCCTGTTCATCTTTTAGGGTTTTCCCTTTCGATTTGGGTAAAGGATTGATTTATCTCGATGCGGATGCTTAAATGGCCGACCCTCCGTTTCAATTCTTAATAATCACCTTCACCTGCAACTTTGTTCCTCAAATTTCGACTTACCCATTTCAATTCGCGATGAAATTGTTCATGGGTCGTCAATTTCACTCTCACTCTGCCTTCGACGTGGCTTCCGAGGCCTTCTCTGAACACCTTTCTCATTTGATCGTTGTTATCTGACTGTTTGCTGTTTTCAGTTACTGGGTTTTCATCCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTTTTTTATATCTTTTTCGAGATTCCTCTTTCTTTTTTCTTTCGTCTTTTTCCATTGCGATGAGTTGCGGTTCGGATTTGATGATGTCTGGGAATTCTGAGGCGGATGATCGTGAGATTGTTGAGAAGGATCCATCAGGACGGTATATACGGATACAAAGCATTCGATGAAGTTGGTGGAATCGAAGTTGCTTGGAGTCAAGTGGACATTGAAGATGTTTTGCAATCACCAGAACAACTTCAAAGATTGTATTCTGAGGTCCATCTGTTGAAGTCATTGAAACATGAAAATATCATCAAGTTCTATAGCTATTGGGTTGATGATAAGCGTAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCATAGGAAAGTTGACTTGAAGGCCTTCAAGAACTGGGCAAGGCAGATACTACGAGGTTTAACATATTTGCATGGTCACAACCCTGCAATCATTCACAGAGATTTGAAATGTGATAATATATTTGTCAATGGGAATACTGGAGAAGTTAAAATTGGAGATCTCGGATTGGCAATTGTCATGCAGCAGCCTACTGCTCGAAGTGTAATTGGCACTCCAGAGTTTATGGCTCCAGAACTTTATGATGAGGACTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTGGAAATTGTTACTTGTGAATACCCATATAATGAGTGCAAAAATTCTGCCCAAATATTCAAGAAGGTTACTTCTGGTATAAAACCTGCTTCCCTTGAGAAGGTGCTGGACCCTCAAGTTAAGCAATTCATAGAGAAGTGTCTGGTTCCAGCTTCTATGAGATTACCTGCAAGTGAACTCTTGAAAGATCCTTTCCTTGCAACTGAAAGTCCCAAGGAGCATAGTTCTGAACTTTCAAGGTTATTGAATGAGCAGTTCAAATCTGCAAATCCTCCACTGATTGATTCTCATCCGATGGACACAGACCCTAACTGCAGCAAACTGTCAGGCTCAGTGGCTTCATCTGTCAAAAGCAATAATGGAATTTCTCACTTTTCAACTCTAGAACTTCAGAGGCTCACCGAGAATAATGTATTGACACTGAAAGGGGACATGACTGATCATAATACGATGTCATTCCATTTGCGTATAGCTGAACTATATGGTAAATCTAAGAATATCCATTTTGCCTTCTATCTCAACTCTGACACTTCTTTGGCAATTGCTTTGGAGATGGTTGAACAACTTGAACTGTCAAATGAAGATGCGACTATCATAGCAAAACTAATTGATGAACTAATTGCCAAGTTTGTTCCTAGCTGGAAACCATGTCCAAATTATTGTGAAGAACAAAATACTCCAAATAGTTCTTCTGAAACTCCAGAGGAAAAGACTTTCATTCCTCCTTTCTTCTCTGAGCTGGTACTGTCATCTCCCATGGTTGCTGCTGCTGCTGCAAGGAATAATCCAAGGGATTTGGACAAGGTCGAAGATCAAGAAAACCAGCAGTCGATTATTTCGTGTGCTTCCGTGGAATACATTTACTCAACTGTCTCAGATTACAGCATGGGAAAAGGATCTGAGTGTGGTGAGTTTGGCCACCCTGAATGCGACAAAGCTTATATTAGCAGTGGAACAATTGATTTAGATGCAGAAGGTGTTGGATCTATTCCAACAATGATCGATTTTGCAAAACCATCTCTAATCTCCTCCTGCTCTGGAATGTCTAAAGAATTGAGTTTATCTAGCTTTTCCACTCTTTCTATGGAAGAAAGAGATCACCAAGATGAACTCAAGATGGAGATTGATGCTATTGATTTGCAGTACCACCAATGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCAATAGAAAGTGCTAAGAAGAGGTGGATGTCAAAGAAGAAAGCTACTGGTATTTGAAGCCCGTCTTTATACTTTGGATTTACTACAAGTTCATTCTCTTTTTCTTTCTTTTCTTGGCAAACTCTTGCTTGCAAAATGGTCATTTTTTTGGTTTTGTTTTTTGGTTTTTTCTTTTTAAACTACTGACTGGTATTCTTTGCATTCTATCCAACCAAGTCCTAACTCCTGACTTTTCGACTCTGATTATTTTTAATTTATACCAATTCATTTCATAGTTTAGACATTTA 2620 39.05 MIVRLLRRIHQDGIYGYKAFDEVGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYSYWVDDKRKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILRGLTYLHGHNPAIIHRDLKCDNIFVNGNTGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEDYNELVDIYSFGMCMLEIVTCEYPYNECKNSAQIFKKVTSGIKPASLEKVLDPQVKQFIEKCLVPASMRLPASELLKDPFLATESPKEHSSELSRLLNEQFKSANPPLIDSHPMDTDPNCSKLSGSVASSVKSNNGISHFSTLELQRLTENNVLTLKGDMTDHNTMSFHLRIAELYGKSKNIHFAFYLNSDTSLAIALEMVEQLELSNEDATIIAKLIDELIAKFVPSWKPCPNYCEEQNTPNSSSETPEEKTFIPPFFSELVLSSPMVAAAAARNNPRDLDKVEDQENQQSIISCASVEYIYSTVSDYSMGKGSECGEFGHPECDKAYISSGTIDLDAEGVGSIPTMIDFAKPSLISSCSGMSKELSLSSFSTLSMEERDHQDELKMEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKATGI 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3194727 3198316 - XM_039018887.1 Bhi12g00098 51910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00098 606 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g00098 606 SMART serkin_6 6 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi12g00098 606 Gene3D - 342 442 - -
Bhi12g00098 606 PANTHER WNK KINASE 17 601 - -
Bhi12g00098 606 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 601 - -
Bhi12g00098 606 Gene3D Phosphorylase Kinase; domain 1 13 83 - -
Bhi12g00098 606 Gene3D Transferase(Phosphotransferase) domain 1 85 266 - -
Bhi12g00098 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Bhi12g00098 606 SUPERFAMILY Protein kinase-like (PK-like) 17 260 IPR011009 -
Bhi12g00098 606 CDD STKc_WNK 17 259 - -
Bhi12g00098 606 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 348 401 IPR024678 GO:0004674|GO:0005524
Bhi12g00098 606 Pfam Protein kinase domain 27 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00516 Bhi-Chr1:9271411 Bhi12g00098 Bhi-Chr12:3194727 1.04E-158 dispersed
Bhi12g00098 Bhi-Chr12:3194727 Bhi12g01711 Bhi-Chr12:55317204 2.51E-135 dispersed
Bhi12g00098 Bhi-Chr12:3194727 Bhi12g00099 Bhi-Chr12:3194727 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88468 PF00069 Pkinase 4.80E-46 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00098 K08867 - csv:101207748 1088.94