Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00102 TGTTTGAAAGTGAGCAAATAAAGGAAGGGTTTTTGAACAATTGATAAGGGAGAAGTTCTCACATGAACCATCTGGAAAAAAAATAAAATAAAACATTCTTTTTTAGATCATCTCTCACCACTTTCAAGGTTTCAACTTTACTCTCTTTTTTTTTTTCCTCTCTAACAAAAACATAAAACAAATAACAAAACCCTTCAAAATTTTCCCACTTTAATTAATTTTTTCTTCACTTCCCATGGATACTGCTCAATGGCCACAGGAGATTGTGGTGAAACCAATTGAAGAAATTGTGACAAACACATGCCCAAAACCAAGTGTTTCAATTTTAGAGAGGAAAATTAGACCTCAAAAGGAACAAGCTTTGAATTGTCCAAGGTGTAATTCAACCAATACCAAGTTTTGTTATTACAATAATTATAGCCTTACACAACCAAGATACTTTTGCAAAACTTGTAGAAGGTATTGGACTGAAGGTGGATCCTTAAGAAATATTCCTGTTGGTGGAGGCTCAAGGAAGAACAAGAGACCTTCTTCTTCTTCATCTACATCTACATCTCCCACACCTTCTTCATCTCATCAACCTATTCCCAAGAAAATTCTTGATCTCCCTCAAAACCCTAAACCCACCCAAGATCTCAACTTGTTCTTCCCACCCTCAAACCATCAAGATCATCATCATTTCACCACCAATAACCTCTCCGAAATCGTTGTCGTCGGTGGTAAACCTACAATTGCCAGTTCCTCATCGGCCTCTGCTGTGTCGTCGTCGCCACCGGCCCCATCGCATCAGCCTTCGGCAATGGAGCTTCTCACCGGAATGACGAGTAGCAACAACAACAACTCTAGGGGTTTGAATTGTTTCGTTTCAATGCCGCCTGTTGTCGTCCCCGATCCTGGCTCCGTTTACACGGTAGGGTTTCCTGATCTCCATGATCAGTTCAAGCCAAGCCTTGGATTCTCTCTCGATGGCTACGGCATCGTCCAGACGGAGGCGAGCAATGGCGGGGGGAGGCTCATGCAGCTGCCATTTGAGGATTTGAAGCAAGGGTCTAATGGAGTTGAACAAGGCAAAGAGCAAGGAGATCATAATTCAAATGGGTATTGGAGTGGAATGTTGGATGGAGGATCATGGTAAATTCTAGGGCTGAATCATATCATTATTCACATTTTGGATCTTTCAACCTCTTTTATTCTTGTCTCCAAAGTGGTTTTCTTCCTCAATTTCAGTCATTAAACTGATTTTTTTTCAACCCATCTTTTATCTCTATTTTTGGTTAAGATTCATTGACGAAATGATGAACTTGAAAAACATATAATCAGTTCAATGACTGAATTATTGATGAAAAAAACAATTTAGAAACAAGAACCAAATTCTATAGCTAGCTAGTACAACACTTAGAACCTTGTTTATTTTGAACCCTAGTTTATTAGATCAATATAACTTTTCAAATTTGACTAATTTTCTCCCTTTGTATTAGGTGACTTTGCTTTGAAATCCTTTTTACATTACTAATGGACATAGTTTATTAGATCAA 1535 38.37 MDTAQWPQEIVVKPIEEIVTNTCPKPSVSILERKIRPQKEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRPSSSSSTSTSPTPSSSHQPIPKKILDLPQNPKPTQDLNLFFPPSNHQDHHHFTTNNLSEIVVVGGKPTIASSSSASAVSSSPPAPSHQPSAMELLTGMTSSNNNNSRGLNCFVSMPPVVVPDPGSVYTVGFPDLHDQFKPSLGFSLDGYGIVQTEASNGGGRLMQLPFEDLKQGSNGVEQGKEQGDHNSNGYWSGMLDGGSW 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3311893 3313977 - XM_039020258.1 Bhi12g00102 51914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00102 299 MobiDBLite consensus disorder prediction 274 293 - -
Bhi12g00102 299 MobiDBLite consensus disorder prediction 94 116 - -
Bhi12g00102 299 MobiDBLite consensus disorder prediction 270 299 - -
Bhi12g00102 299 MobiDBLite consensus disorder prediction 128 145 - -
Bhi12g00102 299 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Bhi12g00102 299 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Bhi12g00102 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 296 IPR045174 GO:0003700|GO:0006355
Bhi12g00102 299 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Bhi12g00102 299 MobiDBLite consensus disorder prediction 84 145 - -
Bhi12g00102 299 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 1 296 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01514 Bhi-Chr1:30926443 Bhi12g00102 Bhi-Chr12:3311893 1.70E-38 dispersed
Bhi08g01605 Bhi-Chr8:46086408 Bhi12g00102 Bhi-Chr12:3311893 1.33E-36 dispersed
Bhi12g00102 Bhi-Chr12:3311893 Bhi12g00672 Bhi-Chr12:20013390 2.83E-51 dispersed
Bhi12g00102 Bhi-Chr12:3311893 Bhi10g00593 Bhi-Chr10:13006453 3.42E-40 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2565 PF02701 zf-Dof 4.30E-33 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00102 - - csv:101204617 483.026