Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00123 GGGCTGCTACAGAGGCTAGTTCCCGTATAATAGGACGCGCGCCAAGCCGTTTCGCGATTCTTTCTCTTTTCTTTTCTTGTGACGGCGTTTCCCCCCCCTCGACGAGCGACAGAGAGGATCAGCGGTTGATTTTCGAGCGGTTTCTGTCTCCGGTGCAGTGACGAAGGAGTTTCAGGAGCTTGACGATGACTTATAATGGAGGAGATTCGTATAGGCAGTCTTGTATTTCGGCCCAAGGTTGTGGAAGAGATGATCTGTATATGGAGCTATGGAGGGCTTGTGCAGGTCCACTGGTTGATATACCTCGCGTTGATGAGAGAGTCTTCTATTTCCCTCAGGGCCATATGGAACAATTAGAGGCATCGACGAATCTGGAGCTAAATAAGAGAATTCCTCTGTTTAATCTTGCCTCGAAGATTCTATGTCGTGTAATTCATATTGAGCCACTGGCGGATCATGAGTCAGATGAGGTTTATGCTCAAATAACTTTAATGCCGGAATCAAATCAAAATGAACCTAAAAGTATGGATCCATGTCCTCCTGAACAAACTAGACCAGTTGTTCATTCATTCTGCAAGGTTTTAACTGCTTCTGATACCAGTACTCATGGTGGGTTTTCTGTCCTCCGAAAACATGCTACTGAGTGCCTACCTCCCTTGGACATGACTCTGGCTACCCCAACTCAGGATCTGGTAGCCAAGGATCTTCATGGATATGAGTGGCGATTCAAGCATATTTTCAGAGGACAGCCACGAAGGCACCTGCTGACAACTGGGTGGAGTACATTTGTTACTTCTAAGAGATTAACTGCTGGGGATTCCTTTGTATTCTTGAGGGGAGACAATGGAGAGTTGCGTGTTGGGGTGAGGCGTCGTGCTCGACAGCAAAGCAGCATGCCACCATCTGTGATATCAAGTCAGAGCATGCACCTAGGGGTGCTCGCAACTGCATCTCATGCTGTTACAACTCAAACCCGCTTTGTAGTCTATTATAAACCTAGGACTTGTCAGTTCATAATAAGTCTAAATAAATACTTGGAAGCAGTCAATAACAAGTTTTCTGTTGGCATGAGATTCAACATGAGTTTTGAGGGAGAGGATTCTCCAGAGAGAAGGTTTTCAGGAACTATAATTGGAGCTGCAGATATTTCACCTCATTGGCCTAACTCAAGCTGGAGATCACTAAGAGTTCAATGGGATGAACAAACATCTATAATGAGACCTGACAGGGTATCACCTTGGGATATAGAACCACTCACGTCTTCCGCAGTCACAGGTCTATCTCAACCCGTTTCAAAAAACAAAAGGCCTCGACAACCAACTCCAGCTCATGATGGCGCTGATTTGACTAAGCCAGCGCATTGGGATTCTGGATTGGCACAGTCACATGATGGTAAACAATGCAGTAATGCAGCTGAAAGCAGAAAAGGTGAAAATACTGAATTGTGCCACCATAGAGAGACAGATTCCATCAGCAACAGCTCATGTGTATCAAGAACACAGACTGACACCTGGCTATCTACCCGATCCAATAGTTATAAACACCCAGTACATGACATGGCGCAGGATTATAAAACTGTGCCTGGCGGTGGGTGGTCCTTTCTGTTAGGAACCTCAACCTGTCACTTGGCTAAGTTAAGTGATGATCAAATACATGACCCCATTGAAAATGGGAGGAACGGTGAAACAGTAGCTAGTTGTAGATTGTTCGGTATTGATCTTAATCATTTGGCTGCTGAGAAAGCATCTCCTCAACCAAGCAGTGTGTCTAGCGACACAGATGGGCGCATCAGTACCTTGTCAGTGGCTCAGTCCGATCCGAAATCTGACAACTTGGAGGGCTCTATAGAAAGAAAATCAGAACCATCACAAGCATCTCTGAAGGAGATTCAATGCAATCAAAGTAGCTCAGCTAACACTAGAAGCCGCACCAAGGTTCACATGCATGGAATGGCCGTGGGTAGGGCAGTGGATTTAACCATCTTAGAAAGCTATGACCAACTAATAGATGAACTTGAGAAGATGTTTGATGTCAGGGGACAGCTGTGTGCTCGAGATAAGTGGGAGATAGTATATACTGACGATGAAGGGGATATGATGCTTGTTGGAGATGACCCATGGGAAGAATTCTGTAACATGGTGAGAAGAATTTTTATATGCTCTAGGGAGCAAGTGAAGAATATGAGCGCAGGAAACAAGCAGCTGACTCCAACAGAAGTTGAAGGGGCTTTAGTACTCCCGGATTCCCCCGCAGTTTGAGATGGGAACTTAATTTTTGTTATTTAAACTCCACTTCAGATGTCTTTCCCTTGTTTGTTTGTTTCGTTAGAGCTTGTTTGGTATTGGGTCGATAATAAAGTATGAAATTGAAAGTGGCAAATGAAAGGCTGTTTATGTGACTGCACATTTTTTAGAGCCAATTAGAAGTCAAACTGGCTTTTAATAACACGAAAGTCTCGCTAGGAGCCAAAGGAGTGGATTGGATGCTCGGTGTAATAATGCATTATATCAGTAGGATTTGGTTTCTGGGGATGGTATGAGTTTGTGTGAGCCTTCTTTCCTGATCAATGTAAATATGTATTTTCTGGACTTCGATCATTTATAACTAGGCAGAAGACTGGAAGCATCATTTGATGCACAAGTTTCAAGAATTTGAACGCGTTCAAATGCAAA 2672 44.12 MTYNGGDSYRQSCISAQGCGRDDLYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLFNLASKILCRVIHIEPLADHESDEVYAQITLMPESNQNEPKSMDPCPPEQTRPVVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLTAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGAADISPHWPNSSWRSLRVQWDEQTSIMRPDRVSPWDIEPLTSSAVTGLSQPVSKNKRPRQPTPAHDGADLTKPAHWDSGLAQSHDGKQCSNAAESRKGENTELCHHRETDSISNSSCVSRTQTDTWLSTRSNSYKHPVHDMAQDYKTVPGGGWSFLLGTSTCHLAKLSDDQIHDPIENGRNGETVASCRLFGIDLNHLAAEKASPQPSSVSSDTDGRISTLSVAQSDPKSDNLEGSIERKSEPSQASLKEIQCNQSSSANTRSRTKVHMHGMAVGRAVDLTILESYDQLIDELEKMFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFCNMVRRIFICSREQVKNMSAGNKQLTPTEVEGALVLPDSPAV 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3921637 3928214 + XM_039051104.1 Bhi12g00123 51935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00123 690 PANTHER AUXIN RESPONSE FACTOR 9 19 677 - -
Bhi12g00123 690 SUPERFAMILY CAD & PB1 domains 574 655 - -
Bhi12g00123 690 MobiDBLite consensus disorder prediction 519 548 - -
Bhi12g00123 690 CDD B3_DNA 127 229 IPR003340 GO:0003677
Bhi12g00123 690 Gene3D - 574 667 - -
Bhi12g00123 690 MobiDBLite consensus disorder prediction 556 582 - -
Bhi12g00123 690 Gene3D - 290 363 - -
Bhi12g00123 690 MobiDBLite consensus disorder prediction 519 583 - -
Bhi12g00123 690 Gene3D - 126 231 IPR015300 -
Bhi12g00123 690 ProSiteProfiles B3 DNA-binding domain profile. 129 231 IPR003340 GO:0003677
Bhi12g00123 690 MobiDBLite consensus disorder prediction 360 439 - -
Bhi12g00123 690 SMART B3_2 129 231 IPR003340 GO:0003677
Bhi12g00123 690 MobiDBLite consensus disorder prediction 360 374 - -
Bhi12g00123 690 Pfam Auxin response factor 255 333 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bhi12g00123 690 ProSiteProfiles PB1 domain profile. 579 660 IPR000270 GO:0005515
Bhi12g00123 690 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 19 677 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bhi12g00123 690 MobiDBLite consensus disorder prediction 400 414 - -
Bhi12g00123 690 SUPERFAMILY DNA-binding pseudobarrel domain 122 258 IPR015300 -
Bhi12g00123 690 Pfam AUX/IAA family 569 615 IPR033389 -
Bhi12g00123 690 Pfam AUX/IAA family 625 657 IPR033389 -
Bhi12g00123 690 Pfam B3 DNA binding domain 129 230 IPR003340 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02968 Bhi-Chr1:73686323 Bhi12g00123 Bhi-Chr12:3921637 0 dispersed
Bhi09g01446 Bhi-Chr9:36642402 Bhi12g00123 Bhi-Chr12:3921637 0 dispersed
Bhi10g00565 Bhi-Chr10:12531418 Bhi12g00123 Bhi-Chr12:3921637 3.38E-21 dispersed
Bhi12g00123 Bhi-Chr12:3921637 Bhi12g00124 Bhi-Chr12:3921639 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2569 PF02362 B3 1.80E-21 CL0405 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00123 K14486 - csv:101209208 1310.82