Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00142 ATGGGAGGTTTGTTAGCTAGTAAAATGTATGATACTGCAAAGGGAATTGTTATTAATCTCATTTCAATGATTGATGAGTTTGGCCATGTTTTGAATGGTGCCAGATCTTATTACACCAACAGAAGTCAGCCTCCCCTTTTGAGTTCCATGGTTTATGATATATACCTTAGGACAGTAGATTTAGAGTTCGTGAGAAATGCACTCCCTGCTTTAATCAAAGAGCATAAGTTTTGGAATTCAGGATTCCATTCAATTACTATCCAGGATGCTCCTGGTGGAAATGGATATCACTCTTTATCTAGATACTATGCAATGTGGAACGAGCCGAGGCCGGAATCGTCACTGCTGGATGAGAAGCTTGCCTCAAAGTTTGTTAATAGCAATGAAAAACAACATCTATATCGGGAAATCGCATCAGCAGCCGAATCTGGTTGGGATTTCAGTTCAAGATGGATGAGGGATTCGACAGACTTATCAACATTGGCTACAACTTCAGTCTTGCCGGTTGATCTCAATGTATTCATACTTAAGATGGAACTTGACATTTCCAATTTGGCAAGGGCTGCAGGAGATTACCGCACGGCACAACACTTTTTTGAGGCTTCTCTAGTCAGAAAGAAGACAGTCAACTCTATTTTCTGGAACCCAGAGAAGGGACAATGGCTTGATTATTGGCTTGATAATGACTCATACAAGGGTGCTCATACATGGGATTCTAGAAACCAGAACCATAACACATATGCTTCAAACTTCATTCCATTGTGGATTGAATCGTTCTACTCTGATAGTAAACAGATGAAGAAAGTCTTGAAAAGTATACGGAACTCAGGCTTGTTGTGCAATGCTGGAATTGCAACTTCAATGATTAATTCCGGAGAACAATGGGATTTCCCGAACGGTTGGGCACCAATCCAACACATGATTGTCGAGGGACTGGCGAGGTCTGGATTGAAAGAAGCAAGAGCATTGGCCGAGGACATTGTCGCGAGATGGCTCCAAACCAACTATGTAGCTTACAAGCACACAGGATATATGCATGAGAAATATGATGTCCAATCGTGTGGAGACTTTGGTGGAGGAGGTGAATATGTCCCTCAGACTGGTTTTGGATGGTCGAATGGAGTTGTTTTGGCATTCCTTGAAGAGTTTGGATGGCCTGAAGATCAAAAGATAGATTGCTACTTAACTTCTTAA 1194 41.62 MGGLLASKMYDTAKGIVINLISMIDEFGHVLNGARSYYTNRSQPPLLSSMVYDIYLRTVDLEFVRNALPALIKEHKFWNSGFHSITIQDAPGGNGYHSLSRYYAMWNEPRPESSLLDEKLASKFVNSNEKQHLYREIASAAESGWDFSSRWMRDSTDLSTLATTSVLPVDLNVFILKMELDISNLARAAGDYRTAQHFFEASLVRKKTVNSIFWNPEKGQWLDYWLDNDSYKGAHTWDSRNQNHNTYASNFIPLWIESFYSDSKQMKKVLKSIRNSGLLCNAGIATSMINSGEQWDFPNGWAPIQHMIVEGLARSGLKEARALAEDIVARWLQTNYVAYKHTGYMHEKYDVQSCGDFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDQKIDCYLTS 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4240400 4242648 - XM_039018336.1 Bhi12g00142 51954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 27 45 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 99 116 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 134 151 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 166 183 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 209 225 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 287 303 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PRINTS Glycosyl hydrolase family 37 signature 367 380 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 PANTHER TREHALASE 2 394 - -
Bhi12g00142 397 ProSitePatterns Trehalase signature 2. 294 303 IPR018232 GO:0004555|GO:0005991
Bhi12g00142 397 SUPERFAMILY Six-hairpin glycosidases 3 386 IPR008928 GO:0005975
Bhi12g00142 397 Pfam Trehalase 1 384 IPR001661 GO:0004555|GO:0005991
Bhi12g00142 397 Gene3D - 1 393 IPR012341 GO:0005975
Bhi12g00142 397 PANTHER TREHALASE 2 394 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00142 Bhi-Chr12:4240400 Bhi12g00145 Bhi-Chr12:4286252 0 dispersed
Bhi12g00142 Bhi-Chr12:4240400 Bhi12g00144 Bhi-Chr12:4285318 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00142 K01194 - csv:101208719 739.954