Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00203 CTCTCTCTTTCTTTCACTCTAATTCTTAATTCTTTTGAGTATTAGTAGTATATATGGCTGACCAAAAGCTTCCAGTTAATGAGAGCCAAATAGACCAATCTCTTCAAAACCCTCTTCCAATATCTAAACCAATTCCCAATATTGACCCTTTTGTCCCCACATCCCAAATTCCAAATCCTAAGTCACAAGAGGGTGAAGGTGAAGCAAAACAACCATCTTTGCTTCAGAAACTTCCACCACCTCCTCCATCTTCCATGGCTTCTTCTTTAACTTCTTCTTCTTCAACTAAGAAGCATTCTTCGTATCGAGGAATCCGGTGCCGGAGCGGGAAATGGGTGTCGGAGATTCGCGAGCCACGTAAGACGACACGCATATGGCTCGGCACATTTCCAACTGCCGAGATGGCTGCTGCCGCCTACGATGTTGCTGCCCTTGCCCTACGAGGCGGGGATGCGGTCCTTAACTTCCCTGCCTCCATTCCCACCTACCCCGTTCCTGCGTCGACTTCTCCGGTTGACATTCGCACTGCTGCCTCCGCTGCTGCTGCTAATGCGGTGAAGAAAGCTGCATCGTCGACTTTGACAGTCGACATCAGCGCTATGAAAGATAGTGGCAATACGATGATGGGGGCGGAGGAGTTTGTGGATGAAGAAGAGATTTTTGGGATGCCGGGTTTACTGGCAGATATGGCGGAGGGGATGATGGTGTCGCCACCCAGAATGAACTCGCCGCCGCTGTCCGATGATTCGATGGAGAATTCTGATGGAACGGAAAGTTTATGGAGCTACTTTTGATAGTATTAATGAATTAAGATTAACTACAAGTTGTGATTAAGAAGATGCGAGTTAGGTGAAAAAAAGAAAAAAGGAAAAGGGGTAGCTTCAAAAAGGCGAGTTCTTGGCCGGCCGCCATAGCTTAGGCTTGATGAAAAATTAGTTCATGGTATACCTTTTTTTGGTCCATTTGATTGATTTTACCCTCTATTTCTTTTATAAATGTAACTTAAGAAAGGGTGAAAGATAGCATTAAGTCAAATATTTAAACATAATCAATTTTGATTAATTCAATAGTGTTGTATAACAGCCAATATAATTCAATTTTGACCCATTTTAATTTACACATAATCAATTTTAATTAATTCAACGGGTTCAAAGGATGCAAGGGTTGCAATGGCGACTATGACAGAGTAATGGTTGAAAATTTTGATATAA 1211 42.69 MADQKLPVNESQIDQSLQNPLPISKPIPNIDPFVPTSQIPNPKSQEGEGEAKQPSLLQKLPPPPPSSMASSLTSSSSTKKHSSYRGIRCRSGKWVSEIREPRKTTRIWLGTFPTAEMAAAAYDVAALALRGGDAVLNFPASIPTYPVPASTSPVDIRTAASAAAANAVKKAASSTLTVDISAMKDSGNTMMGAEEFVDEEEIFGMPGLLADMAEGMMVSPPRMNSPPLSDDSMENSDGTESLWSYF 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5877801 5879011 - XM_039050532.1 Bhi12g00203 52015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00203 246 MobiDBLite consensus disorder prediction 8 23 - -
Bhi12g00203 246 Gene3D AP2/ERF domain 83 141 IPR036955 GO:0003700|GO:0006355
Bhi12g00203 246 MobiDBLite consensus disorder prediction 225 246 - -
Bhi12g00203 246 CDD AP2 84 141 IPR001471 GO:0003700|GO:0006355
Bhi12g00203 246 Pfam AP2 domain 83 131 IPR001471 GO:0003700|GO:0006355
Bhi12g00203 246 MobiDBLite consensus disorder prediction 1 85 - -
Bhi12g00203 246 SMART rav1_2 83 145 IPR001471 GO:0003700|GO:0006355
Bhi12g00203 246 SUPERFAMILY DNA-binding domain 82 141 IPR016177 GO:0003677
Bhi12g00203 246 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 74 246 - -
Bhi12g00203 246 PANTHER ETHYLENE RESPONSE FACTOR 74 246 - -
Bhi12g00203 246 MobiDBLite consensus disorder prediction 221 246 - -
Bhi12g00203 246 ProSiteProfiles AP2/ERF domain profile. 83 139 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g01368 Bhi12g00203 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01368 Bhi-Chr1:27439030 Bhi12g00203 Bhi-Chr12:5877801 1.03E-43 dispersed
Bhi11g00397 Bhi-Chr11:9439334 Bhi12g00203 Bhi-Chr12:5877801 4.09E-50 dispersed
Bhi12g00203 Bhi-Chr12:5877801 Bhi12g00800 Bhi-Chr12:24081018 4.55E-41 dispersed
Bhi12g00202 Bhi-Chr12:5831949 Bhi12g00203 Bhi-Chr12:5877801 9.43E-35 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2575 PF00847 AP2 5.70E-11 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00203 - - csv:101204373 301.212