Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00240 GAAATGCCATGGCGTTATGGGCATTCCTTTTAACTTTCTGAATCGCACATAAAAGGGCATCGCAGTTCCGCCAGAAAGAGCTTCAACTTTCACCATTCTTCTCTCAACCGAACCTCCGCCGCAATTCCGATCAAAATGTTGAAGTTTCCGCGGCGGAAACGATCACCAGCGGCAACAGAGGAGAATCCGAAAAATGCAACAGTGATTGACGATGACGAGACCGCGGCGGCGGCGGCGAAAGCGAAGGTGGTGGTGTGCGTTAGCGGGATGAGTTGCTCTGCTTGCGCTGTTTCAGTTGAGAATTCCATCAAACACCTTCCAGGCATTCTGGATGCGGCCGTCGATTTCTTGAACGACAGGGCTCAAATCCTCTATCTCCCCAATCTCATCGACGAAGAGACAATACTTAAAGCAATTGAAAATGCTGGATTTCAAGCTACAATATCAAACGATGGGAATGATCATCGATCGAGCGAAGTATGTCGAATCCGAGTAAACGGGATGGGCTGCAATTCTTGCTCTTCCATGGTAGAATCGGTTTTGGAAGCAATGTATGGAGTACAAAAGGCTCACATTGCTTTATTTAAAGAGGAAGCAGAAGTTCATTATGATCCAAAGGTTGTTAATTGCAGTCAGTTCATTATAGCCATACAAGACATTGGGTTTGAAGCCTTACCTATAACCATTGGTGAACACATTACCAAGATTGAGCTCAAGATTGATGGTATGCAAAATGAAAACTCAACAACAAAAGTTAAAGAATCACTCGAATCCGTCCTAGGAATTGACGATGTCATTATCGACACGACATTGAGCAAAGTTACGATATCTTATAGGCCTGATATAACAGGACCTAGAACTTTTATCGAAGTCCTCGAGTTGATCAAATCTGAGCATTTCAAGGTGACACTATATCCCGAAGAAACGGGACGAGAAACTCGTAAGGAGAAAGAAATTAAGCAACATTATAAGTACCTTTTATGGAGCTCTGCTCTTTCTATACCTGTTTTCTTAACTTCTATGGTCTTCATGTATATACCTGGAATCAAGCAGACTTTAGATATCAAAGTTGTCAATATGATGAACATCGGGCATATTATTAGGTGGAATTTGTCAACTCCGGTGCAGTTCGTCGTAGGTTCGAGATTTTACATCGGATCATACAAAGCATTGTGTCGCGGTTCTGCCAATATGGATGTATTGGTTACTTTGGGAACAAATGCAGCTTATTTCTATTCTGTTTATATAGTGTTAAGAGCAGCTACGTCTCCTACTTTCAGTGGTACAGATTTCTTTGAAACTAGTTCGATGTTAATTACATTCATTCTACTTGGTAAGTATTTGGAGGTTTTAGCAAAAGGAAAGACCTCCGAGGCCATTGCGAAGCTTAAACACTTGGCTCCCGAGACGGCGACACTCTTAACTCTCGATGGCCATGAAAATGTGATCAGCGAAGTGGAAATCAGTAGTGAGTTGATTCAAAAGAATGATGTTATTAAGATTACGCCAGGTGCTAGAGTAGCTTCTGATGGTCTCGTCGTATGGGGCGAAAGCCATGTCAATGAGAGTATGATCACAGGAGAAGCGAAACCGGTAGCGAAAAGGATGGGCGACAAGGTAATAGGAGGAACCGTGAATGAAAATGGGGTATTGCATATAAAGGCAACACATATTGGATCAGATAGTTCTTTAGCACAAATCGTTCGACTTGTCGAATCATCTCAGTTGGCAAAAGCTCCTATTCAGAAATTTGCTGACCATATCTCCAAGTATTTTGTGCCTCTGGTAATTTTACTTTCTTTTCTCACTTGGATTGTCTGGTTTTTAGCTGGAAAGTTGCATCTCTATCCTAAATCATGGTTGCCCTCTTCAATGGACAGTTTTGAGTTGGCTCTCCAATTTGGTATATCTGTTATGGTCATAGCTTGCCCTTGTGCTCTTGGCCTTGCCACCCCAACCGCCGTAATGGTTGGTACCGGCATCGGTGCATCTCAAGGTGTACTAATAAAAGGCGGTCAAGCATTAGAATTTGCTCATAAGGTGAGTTGCATTGTGTTTGACAAGACAGGAACTCTAACAATTGGAAAACCAGTGGTTGTAAATGTAAAACTCATGGACACTATAGTACTTGAAGAACTCCTTGAACTCACTGCAGCAACCGAGGTTAACAGTGAACATCCAGTAGCCAAGGCCATTGTTGAATATGCCAAACAATTCAAGAAAGAACAAAATCCCATTTGGCCAGAAGCTCAAGAATTCATATCCATTCCTGGCCATGGAGTTGAAGCCACAGTAACGAACAAGAAAATAATGGTTGGAAACAAGAGCTTGATGATGAACAATGACATTGAAATCCCAGGGGAAGTGGAAAGCTTTCTCGTCAACGCTGAAGGTATGGCGCAAACTGCAGTGTTGGTGGCTATAGATCGAATGGTATCGGGAGTTATCGCAGTGTCGGATCCATTGAAACCAAGTGCCAAAGAAGTTATCTCCATTCTCAAGTCTATGGACGTGAAGAGCATAATGGTAACAGGTGACAATTGGGGTACTGCAAATTCCATTGCCAAAGAAGTTGGAATTGAAAAAGTCATTGCAGAGGCCAAGCCTCATCAGAAAGTAGAGGAAGTGAAGAATCTTCAGACGGTCGGACACACGGTGGCGATGGTTGGAGACGGGATCAACGACTCGCCTGCCCTTGTAGCAGCTGATGTCGGGATGGCAATCGGAGCCGGCACCGACATTGCCATTGAGGCAGCAGACATTGTTCTAATGAAAAATGACTTGCAAGATGTTATAACTGCCATTCATCTTTCAAGGAAAACCTTTTCTAGAATCCGTTTAAATTATATTTGGGCTTTAGGTTATAATCTTCTTTCCATACCAATCGCGGCAGGTGTCTTGTTTCCTTCAACTCGGTTTCGATTACCACCGTGGATCGCCGGAGCCGCCATGGCAGCTTCTTCTGTTAGTGTGGTCTGCAGTTCTTTGATGTTGAAGAAGTACAAGAGACTTAAGAAACTTGATGAAGTTGGGATTCAAATGAATGGAATAGTGATTGAATGATGCATATTTATTAGTGTTTATCAATATGAAGTTGCACCAAAGACAAAAATCAAGCAAAGCTTTAATTAATGTACATTGATAAAGTAGAATTGCAACTGT 3162 42.41 MLKFPRRKRSPAATEENPKNATVIDDDETAAAAAKAKVVVCVSGMSCSACAVSVENSIKHLPGILDAAVDFLNDRAQILYLPNLIDEETILKAIENAGFQATISNDGNDHRSSEVCRIRVNGMGCNSCSSMVESVLEAMYGVQKAHIALFKEEAEVHYDPKVVNCSQFIIAIQDIGFEALPITIGEHITKIELKIDGMQNENSTTKVKESLESVLGIDDVIIDTTLSKVTISYRPDITGPRTFIEVLELIKSEHFKVTLYPEETGRETRKEKEIKQHYKYLLWSSALSIPVFLTSMVFMYIPGIKQTLDIKVVNMMNIGHIIRWNLSTPVQFVVGSRFYIGSYKALCRGSANMDVLVTLGTNAAYFYSVYIVLRAATSPTFSGTDFFETSSMLITFILLGKYLEVLAKGKTSEAIAKLKHLAPETATLLTLDGHENVISEVEISSELIQKNDVIKITPGARVASDGLVVWGESHVNESMITGEAKPVAKRMGDKVIGGTVNENGVLHIKATHIGSDSSLAQIVRLVESSQLAKAPIQKFADHISKYFVPLVILLSFLTWIVWFLAGKLHLYPKSWLPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGIGASQGVLIKGGQALEFAHKVSCIVFDKTGTLTIGKPVVVNVKLMDTIVLEELLELTAATEVNSEHPVAKAIVEYAKQFKKEQNPIWPEAQEFISIPGHGVEATVTNKKIMVGNKSLMMNNDIEIPGEVESFLVNAEGMAQTAVLVAIDRMVSGVIAVSDPLKPSAKEVISILKSMDVKSIMVTGDNWGTANSIAKEVGIEKVIAEAKPHQKVEEVKNLQTVGHTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKNDLQDVITAIHLSRKTFSRIRLNYIWALGYNLLSIPIAAGVLFPSTRFRLPPWIAGAAMAASSVSVVCSSLMLKKYKRLKKLDEVGIQMNGIVIE 975
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7597760 7607250 + XM_039050784.1 Bhi12g00240 52052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00240 975 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 18 962 - -
Bhi12g00240 975 SUPERFAMILY HMA, heavy metal-associated domain 184 248 IPR036163 GO:0046872
Bhi12g00240 975 ProSiteProfiles Heavy-metal-associated domain profile. 190 259 IPR006121 GO:0046872
Bhi12g00240 975 Pfam E1-E2 ATPase 421 618 - -
Bhi12g00240 975 PRINTS H+-transporting ATPase (proton pump) signature 844 860 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi12g00240 975 PRINTS H+-transporting ATPase (proton pump) signature 875 900 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi12g00240 975 MobiDBLite consensus disorder prediction 1 21 - -
Bhi12g00240 975 Pfam Heavy-metal-associated domain 40 99 IPR006121 GO:0046872
Bhi12g00240 975 Pfam Heavy-metal-associated domain 118 178 IPR006121 GO:0046872
Bhi12g00240 975 ProSiteProfiles Heavy-metal-associated domain profile. 37 103 IPR006121 GO:0046872
Bhi12g00240 975 SUPERFAMILY Calcium ATPase, transmembrane domain M 385 917 IPR023298 -
Bhi12g00240 975 SUPERFAMILY HMA, heavy metal-associated domain 114 185 IPR036163 GO:0046872
Bhi12g00240 975 CDD HMA 42 102 IPR006121 GO:0046872
Bhi12g00240 975 SUPERFAMILY Calcium ATPase, transduction domain A 440 526 IPR008250 -
Bhi12g00240 975 ProSiteProfiles Heavy-metal-associated domain profile. 115 181 IPR006121 GO:0046872
Bhi12g00240 975 ProSitePatterns Heavy-metal-associated domain. 120 150 IPR017969 GO:0046872
Bhi12g00240 975 SUPERFAMILY HMA, heavy metal-associated domain 36 107 IPR036163 GO:0046872
Bhi12g00240 975 CDD HMA 192 258 IPR006121 GO:0046872
Bhi12g00240 975 SFLD p-type atpase 622 896 IPR044492 -
Bhi12g00240 975 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 353 953 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bhi12g00240 975 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 393 926 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bhi12g00240 975 Gene3D - 113 181 - -
Bhi12g00240 975 CDD HMA 118 179 IPR006121 GO:0046872
Bhi12g00240 975 Pfam haloacid dehalogenase-like hydrolase 637 858 - -
Bhi12g00240 975 Gene3D - 607 901 IPR023214 -
Bhi12g00240 975 ProSitePatterns E1-E2 ATPases phosphorylation site. 642 648 IPR018303 -
Bhi12g00240 975 Gene3D - 725 775 IPR023299 GO:0000166
Bhi12g00240 975 Gene3D - 647 724 IPR023299 GO:0000166
Bhi12g00240 975 Gene3D - 190 259 - -
Bhi12g00240 975 SUPERFAMILY HAD-like 639 950 IPR036412 -
Bhi12g00240 975 PRINTS P-type cation-transporting ATPase superfamily signature 476 490 - -
Bhi12g00240 975 PRINTS P-type cation-transporting ATPase superfamily signature 640 654 - -
Bhi12g00240 975 PRINTS P-type cation-transporting ATPase superfamily signature 769 780 - -
Bhi12g00240 975 PRINTS P-type cation-transporting ATPase superfamily signature 791 801 - -
Bhi12g00240 975 PRINTS P-type cation-transporting ATPase superfamily signature 844 863 - -
Bhi12g00240 975 PRINTS P-type cation-transporting ATPase superfamily signature 867 879 - -
Bhi12g00240 975 SFLD Haloacid Dehalogenase 622 896 - -
Bhi12g00240 975 CDD P-type_ATPase_Cu-like 281 940 - -
Bhi12g00240 975 ProSitePatterns Heavy-metal-associated domain. 42 71 IPR017969 GO:0046872
Bhi12g00240 975 Gene3D - 29 110 - -
Bhi12g00240 975 Gene3D - 408 530 - -
Bhi12g00240 975 PANTHER ATP7, ISOFORM B 18 962 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02347 Bhi-Chr3:51333988 Bhi12g00240 Bhi-Chr12:7597760 0 dispersed
Bhi09g03079 Bhi-Chr9:79517007 Bhi12g00240 Bhi-Chr12:7597760 9.75E-104 dispersed
Bhi09g03080 Bhi-Chr9:79517007 Bhi12g00240 Bhi-Chr12:7597760 3.04E-107 dispersed
Bhi10g01782 Bhi-Chr10:44813169 Bhi12g00240 Bhi-Chr12:7597760 0 dispersed
Bhi10g01783 Bhi-Chr10:44813169 Bhi12g00240 Bhi-Chr12:7597760 0 dispersed
Bhi12g00240 Bhi-Chr12:7597760 Bhi02g00725 Bhi-Chr2:14493477 5.94E-75 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00240 K17686 - csv:101220448 1693.71