Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi12g00252 | AAAGCTTTTATAAACCCTTCACTTTTCGGTTTCCCTTCAACCAAATCTCCCACGAAACTATCTGCCCTTTACACAGAGGAGAAAAACAAAAACTCAGAGCAAGTCTTACATACTCAAAAACCAAGATACATGATCGTGTGTATATGAAGAACTTTTGATACAAGTGTGGTTAGTTTTAATGGGGAAAGGTAGACCAAGAGCTGTGGAAAAGGGGGTAATAGGGCAGAATTTGAGTGTATTTTCATCAACGTCATTGAATATACCATCTGGGCCTGTGTATCATCCAACTGAAGATGAATTTAGAGACCCATTGGATTATATTTATAAGATCAGACCAGAGGCTGAACCGTACGGGATTTGTAGGATAGTGCCTCCCAAGAACTGGAAACCTCCATTTGCATTAAGATTAGATTCTTTTACATTTCCCACAAAAACTCAGGCTATTCATCAATTGCAGGTTAGACCTGCTGCCTGTGATTCAGAGACTTTTGAGCTTGAATATAATAGGTTTTTGGACGATCATTTTGGCAAAAAGATGAAAAAGAAGGTGGTTTTTGAGGGAGAGGAGTTGGATTTGTGCAAGTTATTTAATGCAGTGAAGCGTTATGGTGGGTATGGTAAAGTTGTTAAGGAGAAGAGGTGGGGTGAAGTTTTTAGGTTTGTGAGATCAACAAGGAAGATTTCGGAATGTGCTAAGCATGTGCTGTGCCAATTGTACCGAGAACATCTATATGATTACGAGAACTATTATAATAAATTGAATAAGGATGTCACGAAGAGTTCAAAAAGGAAAATGCAAGATGAGAAGCTTAGTGAATGCTTGGCTGAATTTTCAACTTCTAAAAGGAGGCGGCCAAACACAGACGATGGCAGAGTCAGCGTCGCAAAGTTAAAAGAAGAAGAGAATAATGATCAGATTTGTGAGCAATGTAAAAGTGGATTGCATGGTGAAGTGATGCTTCTATGTGATAGGTGTGACAAGGGGTGGCACATATATTGTCTCTCACCTCCCTTAAAGCAAGTCCCACCTGGGAACTGGTATTGTTTAGATTGCTTGAATTCAGAGAAGGACAGTTTTGGATTTGTGCCTGGTAAATGCTTCTCTTTGGAAGCATTTAAGCGTATGGATTATAGGGCCAAGAAGAAATGGTTTGGCTCAGGGTCTGCTTCTAGAATGCAAATTGAGAAGAAGTTTTGGGAAATTGTGGAAGGTTCATTTGGTGAGGTTGAAGTTAAATATGGCAGTGACTTGGACACATCGGTTTATGGCAGTGGCTTTCCTCGTGAAAATGTTCAGAGACCAGAATCAATTGATGCTAAGGTGTGGGATGAATATTGCAATAGTCCGTGGAATCTCAATAACTTGCCCAAATTGAAAGGGTCCATGCTTAGAGCCATTCGTCACAATATTACTGGTGTTATGGTACCCTGGTTGTATATAGGGATGCTATTTTCATCATTCTGCTGGCATTTTGAAGATCACTGTTTCTATTCAATGAATTACCTACACTGGGGTGACCCAAAATGCTGGTATAGTGTACCTGGTAGTGAAGCTACTGCTTTTGAGAAGGTTATGCGGAATAGCCTTCCTGATCTTTTTGATACACAACCTGATTTGCTTTTTCAACTCGTCACCATGCTGAATCCATCCGTCTTACAAGAAAATGGCGTTCCCGTTTATACTGTACAACAAGAGCCCGGAAATTTTGTTGTGACCTTCCCTAGATCTTTCCATGGCGGTTTTAATCTTGGATTAAATTGTGCTGAGGCCGTAAATTTTGCTCCCGCTGACTGGATGCCTTATGGTGGGTTTGGAGAAGAATTGTATCAGCTTTATCACAAACCTGCTGTTTTTTCTCACGAGGAGCTTATCTGTGTGATAGCAAAGATGGACTGCAGTAACCGAGTTTCTCCTTACCTGAAGAAAGAGTTACTTAGGATTTATTCTAAGGAGAAAAGTTGGAGAGAACAACTTTGGAAAAATGGTGTAATCAGATCTTCTCCGTTGCCTCCTCGAAAGTGTCCGGAATATATTAGTACCGAGGAGGATCCAACATGCGTTATATGTAAGAAGTACCTTTATCTTTCAGCTATAGGTTGCCGTTGTAGGAGATCTGCTTTTGTATGTTTGGAGCACTGGCAACACCTTTGTGAATGCAAGTACAGCAGGCGGCACCTTCTGTATCGTTATACACTTGCTGAACTACATGATTTGATTGGTATAATTGATAGATGTGGTTCTGGGAATACAACTGAAAGAAAGGATTTGCGACAAGCTGGCTTATGCTACACTGAACGATGTACTTTGACAAAAAAGGTGAAAGGTGGTCGTGTCACGCTGTCTCAACTTGCAGAAAAATGGTTACTGCATTCAAGTAAGGTTCTTCAAGATCCATTCTCAAATGAGGCATGTGTTAAGGCTTTGAGAGAAGCCGAGCAATTTCTTTGGGCTGGTCATGACATGGATCACGTCCGTGATGTTGTAAGAAACTTGGATGAAACTCAAAAGTGGCTTCAAGGCATTGGAGATTCCCTTTCTAAAATTGAAGCATGGTCATGTGATCATTATGGACGTTTAGAGAAAATTTGCTTGGATCATGTAAACAATTTGTTGAGTCTGCCCCCAATATCATGTAACCATCCTGGGTATCTTAAGTTGAAGGATTATAGTGAAGAAGCAAAGATTTTGATACAAGATATTGATAATGCCTTATCAACATGCCCTGATGTTTCTGAATGGGAAATTTTGTACTCAAGAGTGTGTGCCTTTCCAATCCATATAGAAGAAAGTGAGAAGTTATCAGAAAACATATCAATAGCGAAGTCTTGCATAGAAAGCGTCAGAGAAATTTTGGAGAAACAGCCTGCTGCTTTTGAGCTTGAGATTCTTTACAAGTTGAAGTCTAAGATCTTGGAACTCGGAATCCAGCTTCCAGAGACAGAAATGGTGCTGGATTTAACAAGGCAGGCTGAACGACATCGTTCTAGATGTTCAGAAATTATGAATGGTCCCATGAACTTGAAGACTGTCGAACTATTCCTTCAAGAATCTAACGATTTTGCTGTTAATATACCTGAACTGAAGCTTATAAGACAGTATCATGATGATGTTGTTACATGGAAGGCTCGTCTTAATGCTGTTATGATTAATGTTCATGAACGGGAGGATCAACAGAATGTAATAGAAGAATTAAATTGCATTCTAAGAGATGGATTATCATTGAAAATTAAAGTTGATGATGTACCTATAGTTGAGGTTGAGTTGAAGAAGGCTTCTGTCAGGGAAAAAGCTCAAAAGTTACGCAATACAAAGGTTACTATGGAATTCATGCAGAAATTGATGGAGGAGGCTGTAGAATTAGAAATTGATAAGGAAAAATTGTTTGCTGATATTCATGGAGTTCTCGGCTCAGCAATGAGTTGGGAGAAGAGAGCTATGGATTTTCTAGCACATGGGGCCCAGTTATCTGATTTTGAAGAGATTATAAGGACTTCTGAAGATTTATGCGTTATTCTACCTTCTCTTCATGGTGTCAAGAATGAAGTATCATCGGCCATGTCCTGGCTAAATATTTCAAAACCTTTCTTAGAGTCTGTTCTCCCTACGTCATCTGCACCAAGATCGCAGCTGAAAATTGAAACATTAAAGGAGTTGGTTTCTCAGTCAAAACTCCATAAGGTCACTTTGGAAGAAAGCAGAGTGCTTGCTGAGGTTCTGAGAAAATGCGAGAATTGGAAAGATGAAGCGAACTCTTTATTGCAAGATATTGATAATCTTTTGAATGCAGATGATATAGGGGATGCGCTGAGCAATTGTCTTATTCCTAAGATTGAACAATTAGTTGATAGAATCAATACCATTATTACAGCCGGTATATCTCTTGGTTATGACTTCCGTGAGATTTCCAGACTTCAAAGTGCTAGTTCTACACTCATGTGGTGCAATAAAGTTCTTTCTCTTTGCCATGGTATTCCTTCTTATCAGGATGTTGAGAGCTTGATGAGGGTTGAAGAGGATGATTCTTGTTTATATGCCTCTGGTGTTATGTGGAGCTTATTGGTGGAAGGTGTCAAATGGCTGAAACAAGCCTTAGAGGTGATTCCTGGAACGTGCAATTCTAAACAAAGAAAGTTGAGCGATGCTGAGGAATTAGTTTCCAACTCTATGAGTATCAGAATCAACTTCTCAGCCATGAATGGTCAACTTGTAAATGCTATTCAGAAGCACAAGCTGTGGCAGGAAGAAGTACGGCAATTTTTCCTAATGAAGCATGCTGAACGATCGTGGACTCTGTTATTAAAGCTTAAGGAAGAAGGAGACATTGTTGCCTTCGATTGTTCAGAGCTACATTTAATTTTTTCCGAAGCTGAAAGGATTGAAAAGTGGGAGAAACAAATGGGGGAAATCATGAAGACATCTTTTGGGGATGGATGTTCTCTGCTTGGTTCTCTACGAGAGATAAAGAAATCACTGGATAGATCCCTATACATATATGAGAAGTCATTGCCCTACACTGATCAGAACTTATGCTTGTGTTGCTCTAGCGATTCACAGGATCAACATCTTTTTACTTGCTCAGTATGTAACGAAAGCTACCATTTGCAGTGCCTGGGGCAAGCAAGAGAAAAAGCAAGCAATACAGATATCTTTATATGCCCTTATTGCTATAGCTCAAATGGTGTATTATCAATTGATAAAAGTGGTGGTCCCTTGAGATTTTTAGCAAATCGTCCTGAACTAGAAATGCTCACTAAGCTCAAATCTGATGCCGTGAACTTCTGTGTCTGGATGGAAGAGGAAGATGTATTAAAGCAACTGATAGAGCAGGCTTTAGTATGCAAATCTCACTTGTCAGAAGTCTTGGACTTTGTGTCACATTGTCATGACAACAATTTTAGTATTGCCTGCAAGAGGTTAACTGTAGCGTTAAAGGCTATGGACGTTGCAGGCATTAACGATCATGAAGGTAAGTCTGGTCTTGAGATGGAACTATTGAGGAACTCGTGGAGATTCAGAGTCAAGGAAGCTCTTGAAGGTTCTGAAAAACCGACAATGCAACGAGTCCTGGAACTTCTCGAAGAGGGATCTGCAATAAGCATTCTGCCTGAAGATTGCTACAGACAGAAACTTTTGGACGTGAAGACTGTTTGCTCAAAGTGGAGAAGTCTTGCAAGGAAGATTTCAGCTGACTGTGGGGCTCTTGAATTAGAAAAAGTTTTTGAATTGATTGTAGAGGGTGAAAACTTACCTGCATACCTCGAGAGGGAGCTCAAGTTATTAAGAAATCGAAGTATGCTTTATTGCATTTGCCGCAAGCCTAATGATCGCAGACCAATGCTTGCTTGTGATATTTGTGAAGAGTGGTATCACTTCGATTGTGTCAAGATAAAATCTACTCCCAAGATATATATTTGTCCTGCTTGCAAACCGCAAGTGGACAATAAAATGTTGATTCAGCTATCAACGGAATATGAAAGTTCAACTGCAAAATTTGTGGAGCCAAAGACCCCTTCTCCTCAACACACAAAACAGAGATCAAAACCGAAGAAAACAAAGCGAAATTTAGTTCGAAGTGTGACGGATTGTTATAGAGAATTCAGGTGCTCAAGTGGAATGGAACGTTTATGGTGGCAAAACAGGAAGCCTTTCAGGAGAGTAACCAGAAGGAGAGCAGAGTTTGGAAGTCTTTCTCCATTTTTCCTCATTGAACAATAATTAAGAATATGTGGAGGTAGGTAGTTTAACCGAAAGTCATTTAATTGATTCAATTGTTCATATGATCAATTTACCTTTCAGCTCAATAATATGAAAGGGAAAATTTTTAATATGTTATTTCAGTCATTTTTTCATTTCAGCTCCAGTCCCAGATGATGGGATATATGGTTATGGTTAGTTAAAATAGTTTAGACATGTATCAAATTAATGAGTAATAATTTGTATATATTTGTTAAATTTTTCATCA | 5963 | 39.29 | MGKGRPRAVEKGVIGQNLSVFSSTSLNIPSGPVYHPTEDEFRDPLDYIYKIRPEAEPYGICRIVPPKNWKPPFALRLDSFTFPTKTQAIHQLQVRPAACDSETFELEYNRFLDDHFGKKMKKKVVFEGEELDLCKLFNAVKRYGGYGKVVKEKRWGEVFRFVRSTRKISECAKHVLCQLYREHLYDYENYYNKLNKDVTKSSKRKMQDEKLSECLAEFSTSKRRRPNTDDGRVSVAKLKEEENNDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKQVPPGNWYCLDCLNSEKDSFGFVPGKCFSLEAFKRMDYRAKKKWFGSGSASRMQIEKKFWEIVEGSFGEVEVKYGSDLDTSVYGSGFPRENVQRPESIDAKVWDEYCNSPWNLNNLPKLKGSMLRAIRHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGDPKCWYSVPGSEATAFEKVMRNSLPDLFDTQPDLLFQLVTMLNPSVLQENGVPVYTVQQEPGNFVVTFPRSFHGGFNLGLNCAEAVNFAPADWMPYGGFGEELYQLYHKPAVFSHEELICVIAKMDCSNRVSPYLKKELLRIYSKEKSWREQLWKNGVIRSSPLPPRKCPEYISTEEDPTCVICKKYLYLSAIGCRCRRSAFVCLEHWQHLCECKYSRRHLLYRYTLAELHDLIGIIDRCGSGNTTERKDLRQAGLCYTERCTLTKKVKGGRVTLSQLAEKWLLHSSKVLQDPFSNEACVKALREAEQFLWAGHDMDHVRDVVRNLDETQKWLQGIGDSLSKIEAWSCDHYGRLEKICLDHVNNLLSLPPISCNHPGYLKLKDYSEEAKILIQDIDNALSTCPDVSEWEILYSRVCAFPIHIEESEKLSENISIAKSCIESVREILEKQPAAFELEILYKLKSKILELGIQLPETEMVLDLTRQAERHRSRCSEIMNGPMNLKTVELFLQESNDFAVNIPELKLIRQYHDDVVTWKARLNAVMINVHEREDQQNVIEELNCILRDGLSLKIKVDDVPIVEVELKKASVREKAQKLRNTKVTMEFMQKLMEEAVELEIDKEKLFADIHGVLGSAMSWEKRAMDFLAHGAQLSDFEEIIRTSEDLCVILPSLHGVKNEVSSAMSWLNISKPFLESVLPTSSAPRSQLKIETLKELVSQSKLHKVTLEESRVLAEVLRKCENWKDEANSLLQDIDNLLNADDIGDALSNCLIPKIEQLVDRINTIITAGISLGYDFREISRLQSASSTLMWCNKVLSLCHGIPSYQDVESLMRVEEDDSCLYASGVMWSLLVEGVKWLKQALEVIPGTCNSKQRKLSDAEELVSNSMSIRINFSAMNGQLVNAIQKHKLWQEEVRQFFLMKHAERSWTLLLKLKEEGDIVAFDCSELHLIFSEAERIEKWEKQMGEIMKTSFGDGCSLLGSLREIKKSLDRSLYIYEKSLPYTDQNLCLCCSSDSQDQHLFTCSVCNESYHLQCLGQAREKASNTDIFICPYCYSSNGVLSIDKSGGPLRFLANRPELEMLTKLKSDAVNFCVWMEEEDVLKQLIEQALVCKSHLSEVLDFVSHCHDNNFSIACKRLTVALKAMDVAGINDHEGKSGLEMELLRNSWRFRVKEALEGSEKPTMQRVLELLEEGSAISILPEDCYRQKLLDVKTVCSKWRSLARKISADCGALELEKVFELIVEGENLPAYLERELKLLRNRSMLYCICRKPNDRRPMLACDICEEWYHFDCVKIKSTPKIYICPACKPQVDNKMLIQLSTEYESSTAKFVEPKTPSPQHTKQRSKPKKTKRNLVRSVTDCYREFRCSSGMERLWWQNRKPFRRVTRRRAEFGSLSPFFLIEQ | 1845 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 7696541 | 7729350 | - | XM_039050874.1 | Bhi12g00252 | 52064 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi12g00252 | 1845 | ProSitePatterns | Zinc finger PHD-type signature. | 1709 | 1749 | IPR019786 | - | |
| Bhi12g00252 | 1845 | Pfam | PHD-finger | 247 | 294 | IPR019787 | - | |
| Bhi12g00252 | 1845 | Pfam | PHD-finger | 1708 | 1751 | IPR019787 | - | |
| Bhi12g00252 | 1845 | ProSiteProfiles | Zinc finger PHD-type profile. | 1448 | 1499 | IPR019787 | - | |
| Bhi12g00252 | 1845 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1695 | 1751 | IPR013083 | - | |
| Bhi12g00252 | 1845 | ProSiteProfiles | ARID domain profile. | 98 | 192 | IPR001606 | GO:0003677 | |
| Bhi12g00252 | 1845 | SUPERFAMILY | FYVE/PHD zinc finger | 238 | 296 | IPR011011 | - | |
| Bhi12g00252 | 1845 | SUPERFAMILY | Clavaminate synthase-like | 340 | 567 | - | - | |
| Bhi12g00252 | 1845 | Coils | Coil | 1051 | 1071 | - | - | |
| Bhi12g00252 | 1845 | SUPERFAMILY | FYVE/PHD zinc finger | 1442 | 1501 | IPR011011 | - | |
| Bhi12g00252 | 1845 | SMART | JmjN_1 | 30 | 71 | IPR003349 | - | |
| Bhi12g00252 | 1845 | Gene3D | Cupin | 32 | 536 | - | - | |
| Bhi12g00252 | 1845 | Pfam | jmjN domain | 32 | 65 | IPR003349 | - | |
| Bhi12g00252 | 1845 | ProSiteProfiles | Zinc finger PHD-type profile. | 245 | 295 | IPR019787 | - | |
| Bhi12g00252 | 1845 | SMART | PHD_3 | 1450 | 1497 | IPR001965 | - | |
| Bhi12g00252 | 1845 | SMART | PHD_3 | 247 | 293 | IPR001965 | - | |
| Bhi12g00252 | 1845 | SMART | PHD_3 | 1708 | 1750 | IPR001965 | - | |
| Bhi12g00252 | 1845 | SMART | bright_3 | 99 | 193 | IPR001606 | GO:0003677 | |
| Bhi12g00252 | 1845 | Pfam | PLU-1-like protein | 928 | 1195 | IPR013637 | - | |
| Bhi12g00252 | 1845 | Coils | Coil | 1024 | 1044 | - | - | |
| Bhi12g00252 | 1845 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE | 23 | 1049 | - | - | |
| Bhi12g00252 | 1845 | Gene3D | - | 84 | 189 | IPR036431 | GO:0003677 | |
| Bhi12g00252 | 1845 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 249 | 294 | IPR013083 | - | |
| Bhi12g00252 | 1845 | ProSiteProfiles | JmjC domain profile. | 385 | 551 | IPR003347 | - | |
| Bhi12g00252 | 1845 | SUPERFAMILY | FYVE/PHD zinc finger | 1703 | 1755 | IPR011011 | - | |
| Bhi12g00252 | 1845 | SMART | ARID_2 | 95 | 188 | - | - | |
| Bhi12g00252 | 1845 | Pfam | JmjC domain, hydroxylase | 418 | 534 | IPR003347 | - | |
| Bhi12g00252 | 1845 | SMART | cupin_9 | 385 | 551 | IPR003347 | - | |
| Bhi12g00252 | 1845 | Coils | Coil | 827 | 847 | - | - | |
| Bhi12g00252 | 1845 | CDD | PHD_RSF1 | 248 | 292 | - | - | |
| Bhi12g00252 | 1845 | Coils | Coil | 1176 | 1203 | - | - | |
| Bhi12g00252 | 1845 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1440 | 1508 | IPR013083 | - | |
| Bhi12g00252 | 1845 | Pfam | C5HC2 zinc finger | 627 | 678 | IPR004198 | - | |
| Bhi12g00252 | 1845 | MobiDBLite | consensus disorder prediction | 1770 | 1792 | - | - | |
| Bhi12g00252 | 1845 | CDD | PHD_SF | 1451 | 1496 | - | - | |
| Bhi12g00252 | 1845 | ProSiteProfiles | JmjN domain profile. | 31 | 72 | IPR003349 | - | |
| Bhi12g00252 | 1845 | Pfam | ARID/BRIGHT DNA binding domain | 107 | 188 | IPR001606 | GO:0003677 | |
| Bhi12g00252 | 1845 | CDD | ARID | 100 | 188 | - | - | |
| Bhi12g00252 | 1845 | SUPERFAMILY | ARID-like | 81 | 199 | IPR036431 | GO:0003677 | |
| Bhi12g00252 | 1845 | ProSitePatterns | Zinc finger PHD-type signature. | 248 | 292 | IPR019786 | - | |
| Bhi12g00252 | 1845 | PANTHER | LYSINE-SPECIFIC DEMETHYLASE LID | 23 | 1049 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi12g00252 | K11446 | KDM5, JARID1; [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67] | - | csv:101216734 | 3480.26 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi09g00852 | Bhi-Chr9:18710020 | Bhi12g00252 | Bhi-Chr12:7696541 | 8.47E-08 | dispersed | |
| Bhi09g00853 | Bhi-Chr9:18710020 | Bhi12g00252 | Bhi-Chr12:7696541 | 7.39E-08 | dispersed | |
| Bhi11g01662 | Bhi-Chr11:47833461 | Bhi12g00252 | Bhi-Chr12:7696541 | 5.01E-09 | dispersed | |
| Bhi11g01663 | Bhi-Chr11:47833461 | Bhi12g00252 | Bhi-Chr12:7696541 | 4.92E-09 | dispersed | |
| Bhi12g00252 | Bhi-Chr12:7696541 | Bhi06g01091 | Bhi-Chr6:30926652 | 7.70E-15 | dispersed | |
| Bhi12g00670 | Bhi-Chr12:19817520 | Bhi12g00252 | Bhi-Chr12:7696541 | 2.35E-12 | dispersed | |
| Bhi12g00252 | Bhi-Chr12:7696541 | Bhi12g00253 | Bhi-Chr12:7696541 | 0 | tandem |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi2g327 | . | . | . | . | . | . | . | Bma14g00076 | . | . | . | Cma15g01224 | . | Car15g01104 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone8ag0485 | Cone12ag0310 | . | . | . | Csa05g00286 | Chy09g01220 | . | . | . | . | . | . | . | . | . | . | . | Cmo15g01289 | Cma06g00632 | . | Car06g00566 | . | . | Cpe13g00159 | Bhi12g00252 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cme09g01757 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0010126 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 32 |
Regulatory proteins
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 2578 | PF08429 | PLU-1 | 2.30E-24 | No_clan | Bhi | TR |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Bhi12g00252 | Bhi_Chr12 | FPKM | 0.069465 | 0.314458 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |