Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00260 CATGAACAGGAACTTCGCAGTAATCTTGTCTCTCCCAGCAACCTTCACTCGTGTGAGAGAGAGAAATTTTCTCGCTCCTCCTCTCATTTTTACTCTCTCTAACGCATGCTTTCTCTCTCTAAAATTTGCCTTGCATCACATACTCACTCAAAGAGCTTACTTTTGTGCTCATTTTGCTTTAAGGCTATTGCCCAAGTTCTTCTCTCTCACCCTTCAACTTTCCTTGATTCGTTCTGAAATTCTCATTTAGTGACAGCTTCACCGTTTCTTAATTTGGGTTTCCCCCCCTTCTGCTGTGGATTCTTTTGAAGCTTTCAGCTGAAGAGATTGGTCGACATGATTGCTTCTCTCTGCTGTTTGTTGGGTTTTCCTTTGCCTTCACTCTTCTAAGATCTGGTGGGAGCTGTGGTTCATACGATGGGACAAGAGACAGAATTGGACTTTGACAGCCTTTGCAGTGTGGATCTGAGTCCCAACACCGTTCTTCCTTCAATTCCACGACATTCAAGCATAAAAGACAGAAGCACAAGGAAAAAACTAAAGCATAAAGATTTTGTATTGAATGTAAAGGAGGATTTTACAGAGATTAGATTTGGTGGTGGCCGCAGGTCTCAAAAAAGCAATTCATCTAGCCTAGTTGAACTGGAAGGCAATGAGCGTACAGGTTTTGAATTGAATGTAGAGGATGATTTCACAGAGATTAGATTTGGCCGCGGCCATAGTTCTCATAAATGCAATTCACCTAGCCTAGTTGGATTGGAAGATGACAAAGTGCTCAAGTGGCATTCCAAGTACCAAAGCTCTGAAGATGTAGGTAACCTCGAAGCGATGGCCATTCAAGGAGAAAGGAGAAAAATAGAAGTTTCTCGTGACAATTACACCTCTTGGTCTTCTGGTATTGTTGACTCTTTGTGTAGTTCTGATGAGGAAAAACCAGAGAGGAGAGATCTGGTATTATCTTTGGACACAAAATTGAATCAATCATCAGTTAATAAGCCTTGCATAGGCCCACGTTCATCAGATAGCTTCATTGATATCTACTTAGGTTCAGAGAATAGTGAAACTGTATCGAAAGATCCAAGCAATCAGCTTGGAAATGTTACAGGCATTAGACCCCTTCACAATGGCAAGAAACTTTTCAAGAGAGACAAGGTTCATGCATTGCAGAAGTCACTCTCTGCTAAGTTAGAAATGTCTAAAAGTCAGCTTCCATTGGAAAGTGATCTACGGTTTAGACACAACCCAAAGCCTCATATAAGTCCTTTCAGGAAAATCTTGGATCCATTTACGAAATCCAAGTCTGTCAGAAGTCGTTTCAGTCATGCGGTAGAAGCTGGTGGAGATAAAGCTGTTAAGACAATTGACTTGGAGAGAAACGAGACATACAGAAAACCTTTGTTGCAAGATTTCTCAAATACAGCAAAGAGTTCAGGTTGTGATTCTAATTTTCCAAATAATGATAATCACCATAATGGTGTTGCATCTTCGCCTGTACATTTACATGGCTCTCTAAAGTTGGAAAAAAAACATGGGATGCCATTTTTTGAGTTCTCTCAGAGCTCCCCTGAAGATGTCTACGTGGCCAAGACATGGAAGACAGGCAATGCCTTTAAATGGGTATACACCTTTCATACCCAAGATCATCAAAAAAAGAGTAATGGAAGTAGTTTTGGATTGAATCACAGCTGCAAAAACTCCTTAATGGTGGGTCAGATGCAAGTTTCCTGTTATTTATCCTCTGAACTTCGAGATGGTGGTTTTGACAACTCAATGGTCACAGAATTCGTTCTGTATGATGCTGCACGTGCTAGACAAAGTACTGCATCCCAAGGAAGTTGCGACTCTATCCATGATGATGTCAAACCTTCTAAAAGTTCTGATTCGGGTTTAGTTGGGGAAGCCCTCAGTGTGAATGATGGAACTCCTTTAGAAAAATCCAAATTTCATAAAAAACATGCTCCTGAAAACTGTGATTATGGTTCTATAGATTCTTGCCCTTGGGATTCAGCAGATCTACATCCAGACCTTGAATCTGCAGCTATTGTTATGCACATCCCATTTAGCAAAAGAGAGAGTTTGAAGTATAAAAGAGGTGATAAGACAAGCGGTAAATTGAACTCAGCCATACAAAACCTCTCTAAGATTGAACAAAGAAAAGATGAACCTCCCCATCACACAACTCAAGAAACTCTGAAGGTGGTAATTCCCATTGGAAACCATGGTTTGCCAACTGTTGAAAGCCATGGCCCTTCTACATTACTCGATCGATGGAGGTTGGGAGGTGGTTGTGACTGTGGCGGTTGGGACATGGGTTGTCCTCTACTAATTTTGGGCACCCACAGTAGCCACTGTGCTGAGAATCAAGCACACAAGGGGAAACAGACTTTTGAGCTTTTTCATCAGGGAGTAAAAGATTCCACTCCAGCATTGACCATGAATGTTGTCAAAGATGGACAATATGCTGTCGATTTTCATGCGCGATTATCAACATTGCAAGCATTCTCCATTTGTGTTGCTATTTTACATGCGACTGAAGCCTGTACTGCTGTCCAGGTAGAGGAAACAAAAGAGTTGCAGCATTGCAATTCCTTAAAGGTGCTTCTTGAGGAGGAAGTAAAATTCCTGATCGATGCAGTCACAATGGAGGAGAAGAAAAGAGAAACGAGAATGTTGAAAGAAACACCAACATCATATTTGTTCAATCCTCCATTTTCTCCTATTGCTAGAGTGTAAGATGAAGGCCAACTTGATCGGTACAGATAGTAAGGCTTCTTCAGATGGTTCCACGTTGACTTTTGATAGACCGCCTCATTCAAGTTATGGAAGCTGCTTGATAAAGCTCCAATGGAAGAAATTGTACAAGGAACCTTCTCAGCAACCGCACGGGCTCTCGGAGTCGGGCATTTGATTTATTTTGTAGAACAGAGAAAGAGCTTGCTTAGAGAAGCTGAAATGACTAGTAGGAGAGTCCTGAGAAGATGCTAATTGGGGAACTCAGATCATTATGATATGAGGGTATCAGGACACTTTTATTTATTATTCTTCAAAAACCAAATCCTTTTGAATAACGTGGTAGTTAATTGTTCATATTGTAATATGGTAGGGAGATGAGTAGCCAATTGATAATTAGAGAGATACTACTGTCCTTCACATTAAACTTTTTGTACATTATATTGTTAAGAGGCAAAGTGTAAGACTTGATATCAGTAGAAATAACATAAAGTTTTGTCTT 3232 40.56 MGQETELDFDSLCSVDLSPNTVLPSIPRHSSIKDRSTRKKLKHKDFVLNVKEDFTEIRFGGGRRSQKSNSSSLVELEGNERTGFELNVEDDFTEIRFGRGHSSHKCNSPSLVGLEDDKVLKWHSKYQSSEDVGNLEAMAIQGERRKIEVSRDNYTSWSSGIVDSLCSSDEEKPERRDLVLSLDTKLNQSSVNKPCIGPRSSDSFIDIYLGSENSETVSKDPSNQLGNVTGIRPLHNGKKLFKRDKVHALQKSLSAKLEMSKSQLPLESDLRFRHNPKPHISPFRKILDPFTKSKSVRSRFSHAVEAGGDKAVKTIDLERNETYRKPLLQDFSNTAKSSGCDSNFPNNDNHHNGVASSPVHLHGSLKLEKKHGMPFFEFSQSSPEDVYVAKTWKTGNAFKWVYTFHTQDHQKKSNGSSFGLNHSCKNSLMVGQMQVSCYLSSELRDGGFDNSMVTEFVLYDAARARQSTASQGSCDSIHDDVKPSKSSDSGLVGEALSVNDGTPLEKSKFHKKHAPENCDYGSIDSCPWDSADLHPDLESAAIVMHIPFSKRESLKYKRGDKTSGKLNSAIQNLSKIEQRKDEPPHHTTQETLKVVIPIGNHGLPTVESHGPSTLLDRWRLGGGCDCGGWDMGCPLLILGTHSSHCAENQAHKGKQTFELFHQGVKDSTPALTMNVVKDGQYAVDFHARLSTLQAFSICVAILHATEACTAVQVEETKELQHCNSLKVLLEEEVKFLIDAVTMEEKKRETRMLKETPTSYLFNPPFSPIARV 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7920811 7925170 + XM_039019861.1 Bhi12g00260 52072

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00260 771 PANTHER EXPRESSED PROTEIN 86 771 - -
Bhi12g00260 771 PANTHER EXPRESSED PROTEIN 6 77 - -
Bhi12g00260 771 MobiDBLite consensus disorder prediction 338 357 - -
Bhi12g00260 771 MobiDBLite consensus disorder prediction 338 354 - -
Bhi12g00260 771 MobiDBLite consensus disorder prediction 470 504 - -
Bhi12g00260 771 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 86 771 - -
Bhi12g00260 771 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3527)-RELATED 6 77 - -
Bhi12g00260 771 Pfam Domain of unknown function (DUF3527) 358 704 IPR021916 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00260 - - - bhj:120068157 1553.11
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00681 Bhi-Chr1:12775180 Bhi12g00260 Bhi-Chr12:7920811 1.19E-25 dispersed
Bhi01g00682 Bhi-Chr1:12776187 Bhi12g00260 Bhi-Chr12:7920811 1.19E-25 dispersed
Bhi12g00260 Bhi-Chr12:7920811 Bhi10g00773 Bhi-Chr10:15843912 2.86E-25 dispersed
Bhi12g00260 Bhi-Chr12:7920811 Bhi12g00261 Bhi-Chr12:7921227 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g322 . . . . . . . . . . Cma02g01453 Cma15g01226 Car02g01219 Car15g01106 . . Cpe05g00334 . . . . . . . . . . . . . . Cone8ag0305 . Cone6ag0779 Cone9ag0784 . Csa05g00281 Chy09g01228 . . . . . . . . . . Cmo02g01488 Cmo15g01291 . . . . . Cpe13g00157 Bhi12g00260 . . . . . . Cla01g00265 Cam01g0272 Cec01g0265 Cco01g0280 Clacu01g0272 Cmu01g0260 Cre09g2248 Lsi09g00260 . . Cme09g01763
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007949 0 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 2 0 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00260 Bhi_Chr12 FPKM 27.363859 31.39328 32.123867 29.638693 41.567879 35.047577 44.124447 31.78261 33.951054 29.428118