Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00294 GAATTAGATGACCATACCATTACTTTGGACCACCTCATCTCCTCTCTTTCTCCTTTCCCCACACCACAACCCCCCTTTTTTGGGATCTTTTTTTTTTTTTTTCAATTCCCACTCCCCAAAAGAAAAAATATATCCCTTCCTTCTTTCAGTCCTTTCTCCCAATTTTTTCCTTTTTTGAGTTTCATAAAAAAAAATCACAGGTGAAGAAGAAGAAGAAGAAATCAGGAAGCCCATTTTGGACAGATTTATCCCTCTTTGCATTGACCCATTAAAGAGAGAAAGAAGCTCAGAGACCCCCAAAACAAACAGTTTTTTTTTTTTTTTTTTTTTTTGCAGAGCAGAGGAGAGAGAAATGTTTAAAGAGTACTTGAGATGATGATTATTATTATTACAGCTTTAGCTCCCAGCAGCTCATCATCGCCTCTATATTTCTCTCCCTATTTTATACCTCTTTCCTTTTTCCATCCTTTCCCCTAAAAACCACTCCAAAATTAACCCCCACAAAGATTCCTCCACCGTCTCCGCCGCCGCAACCACCGCCACCGCCACCGCCGCCCTATCTTACCTCTTCTCTTATCTGGATTAGATCAAGGTTGATGGACTTGAAATACCAATAAAAAACAACAAGTTCTTGGATTTGAATCTTGATCAAAGATTCCAATAAAAAAGAGAACAGAAAGATCTATTTTCTTTTTTAAGTTGATGGCTGGAGAGCTTTGTGAAGGAGGAGAAAAATCAAACGAGATGGTATTTGGAGGAGTGTTTTATTACAATTCCAATTCAAATTCAAACAACATCGTCCCAAATCAATTCACAAATCAGATCCAAACCGGGTTCGGTTCCACCACCGAACCCACGACGGAGATGTTCAACAAATCGGGTGGTGGTGGCGGTGGTGATGACGACGATGAGTCGTTTCATCAGAATATGATGGTGGTTGGACCATGGGGGACGACGACAACGACGATGGCGACGGCGGATTCTTCTTTAAGATGTGTGTTTCCATGTGAACCAAATGAAAGACCAAGCCAAGGCCTTTCTTTGTCTCTTAGTTCTTCTAACCCTTCTTCTATTGGCTTACAATCTTTTGAACTAAGACAACAACAACAAAACCAATCATCTTTTCCCATTTTTCACCTTAGAAACTCGAGGTTTTTAATCCCAACTCAAGAACTTCTTAATGAGTTTTGTAGCCTTGGAATTACCAATAACATCAATCATTCTTCTTCCTCACCAAAACACAAACATGGCTCTTCTTCTACCAATTTCTCTCTTCAATCACTTGATTTCATGGACTTGCAAAAGAGGAAAACCAAGCTTTTTTCCATGCTTGAAGAGGTTGAAAGAAGGTATAGGCATTATTGCGAGCAAATGAAGATGGTGGTGGCGTCGTTCGAAGCGGTGGCAGGGAGTGGGGCAGCGAGGGTGTACTCGGCGTTGGCATCGAAAGCGATGTCGAGGCATTTTAGAAGCCTAAAAGATGGGATTGTGGGGCAAATTCAAGCCACAAGAAAGGCAATGGGAGAAAAGGATCCAATTGCACCTGGTACTACAAGAGGAGAAACACCCAGGCTTAGAGTGATTGATCAAGCTTTAAGACAACAAAGAGCTTTCCATCAAATCAGCATCATGGAAAGCCATCCATGGCGCCCTCAACGCGGCCTCCCCGAACGTTCTGTTTCCGTTCTTCGCGCTTGGCTTTTCGAACACTTCCTTCACCCGTATCCTAGCGATGTGGATAAACATATTTTAGCTCGCCAAACTGGTCTCTCCAGAAGCCAGGTGTCAAATTGGTTCATTAATGCAAGGGTGAGGCTGTGGAAGCCAATGGTAGAAGAGATGTATTTGGAAGAAACAAAGGAACAAGAGGATGAGATTGATAACAGTTTCAACAACATGAACAGCAATGCCAACAACTCTTTTGATGGGGTGGCGGATTTTGACGACGAAATCGATGGCCATCGGTCGATCGCAACACGACTCGAGGATCAGAAGCCGACACCGGACCAACTCCTAAGAATAGACTCGGAATGTCTCTCTTCAATCATCTCTAATAACTCAGAGAAGAATGATCATTCAAGAACGATGAAAACGATGCAAAACCACCACGGACACCACATCCACGAAAACCATGACCATAGTTTTGGACGGGTTGTGGGCGATGCATTTGGCACGGTAGAGCTTGACTTCTCGTCCTACAATCACCATACTGGTAGCGGGGGTGTTTCGTACCCTAACAACAACAATAACAATAATCAACATTTCAATAACGGCAGCGGTGGAGGCGTGTCGTTGACATTAGGGTTACAACAGCATGCAGCAGTCGGGGGGAACGGCAACGGAGGAGTGAGCATCGCCTTTTCTCCCGCCGCGGCGGCGGCACAAAGCTCCCTTTTCTTCACAAGAGATCACATGGAAGAATGTCCACCAGTTCAATATTCCCTTTTAGATGGAGAAACTCAGAATCTTCCTTATAGAAACTTGATGGGTGCTCAATTGCTTCATGATTTGGCTGGATAATGACCTCAAAATCAGCCAGAGAGATCAAATGGGTCAGCTGGAAAATGCTTAGTTTTTTTAGGTATAGATAACCCAATAGCTTCAAATACTCCAATACATAATATACATAAAGCTTTTTTATATACTTTGGGGGAGGGTTAATTAGATTATTAATCATAGCTATGGTAGATCAACTTGTTTTTGTTTTTGTTTTTTTTGTTTTTCTAGTTTTTTTTTTTAAAACCCATCTAGTTATTTCAACTCTTTATTTCTCCATCTTCTTCAAATTTTCAAAAATGGTTTTACCCTTTTGAATTTGGAAGGGATGATTATGATGATGATATGGAACTAGAAATATACAAATGGATGGTTATGATTGGCACATATA 2887 41.6 MAGELCEGGEKSNEMVFGGVFYYNSNSNSNNIVPNQFTNQIQTGFGSTTEPTTEMFNKSGGGGGGDDDDESFHQNMMVVGPWGTTTTTMATADSSLRCVFPCEPNERPSQGLSLSLSSSNPSSIGLQSFELRQQQQNQSSFPIFHLRNSRFLIPTQELLNEFCSLGITNNINHSSSSPKHKHGSSSTNFSLQSLDFMDLQKRKTKLFSMLEEVERRYRHYCEQMKMVVASFEAVAGSGAARVYSALASKAMSRHFRSLKDGIVGQIQATRKAMGEKDPIAPGTTRGETPRLRVIDQALRQQRAFHQISIMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEETKEQEDEIDNSFNNMNSNANNSFDGVADFDDEIDGHRSIATRLEDQKPTPDQLLRIDSECLSSIISNNSEKNDHSRTMKTMQNHHGHHIHENHDHSFGRVVGDAFGTVELDFSSYNHHTGSGGVSYPNNNNNNNQHFNNGSGGGVSLTLGLQQHAAVGGNGNGGVSIAFSPAAAAAQSSLFFTRDHMEECPPVQYSLLDGETQNLPYRNLMGAQLLHDLAG 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8560978 8565967 + XM_039018344.1 Bhi12g00294 52106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00294 605 Gene3D - 318 380 - -
Bhi12g00294 605 SMART HOX_1 315 379 IPR001356 GO:0003677
Bhi12g00294 605 CDD homeodomain 315 376 IPR001356 GO:0003677
Bhi12g00294 605 SMART prehox3 140 264 IPR006563 -
Bhi12g00294 605 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 549 - -
Bhi12g00294 605 Coils Coil 382 402 - -
Bhi12g00294 605 ProSiteProfiles 'Homeobox' domain profile. 312 375 IPR001356 GO:0003677
Bhi12g00294 605 SUPERFAMILY Homeodomain-like 316 381 IPR009057 -
Bhi12g00294 605 MobiDBLite consensus disorder prediction 47 73 - -
Bhi12g00294 605 Pfam Associated with HOX 146 262 IPR006563 -
Bhi12g00294 605 Pfam Homeobox KN domain 332 371 IPR008422 GO:0003677|GO:0006355
Bhi12g00294 605 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 7 549 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi10g02203 Bhi-Chr10:56344405 Bhi12g00294 Bhi-Chr12:8560978 3.03E-99 dispersed
Bhi11g02375 Bhi-Chr11:64704119 Bhi12g00294 Bhi-Chr12:8560978 4.41E-82 dispersed
Bhi11g02376 Bhi-Chr11:64704119 Bhi12g00294 Bhi-Chr12:8560978 4.41E-82 dispersed
Bhi12g00294 Bhi-Chr12:8560978 Bhi12g00295 Bhi-Chr12:8561478 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2581 PF07526 POX 4.80E-42 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00294 - - cmo:103482774 982.63