Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00358 ATGGCCGCTTCTGGGGGTACTAGTTATAGAAATGGTGCCACTTCCAGAAACTCTCTTAAGCTCGATAAGCCCTTTTCTGCTAATTCCAACCCCAAGTCTTCTCTCAAGTCAAAGTCTCTTCCCACTTCTGCTCTTCGCCGTAGTAGCCCTGCATCTCTCGGAGCTGCCAAGGATGATGGTGGAGTTCCTGGAAGAGTTCGAGTGGCTGTTAGATTGCGACCACGAAATACAGAAGAATTGATAGCCGATGCTGATTTTGCTGATTGTGTAGAACTACAGCCAGAGCTTAAAAGGTTGAAACTTCGGAAGAACAACTGGGATTCAGATACGTATGAGTTTGATGAAGTGCTAACTGAGTTTGCATCTCAAAAACGTGTTTATGAAGTCGTGGCTAAACCTGTTGTGGAGAGTGTATTGGATGGCTACAATGGAACAATTATGGCATATGGACAGACTGGTACTGGTAAAACATATACGCTTGGAAGACTTGGAGAGGAAGATACCGCTGACCGTGGAATCATGGTGCGTGCTATGGAGGACATCTTGGCTGAAGTTTCTTTGGAGACAGATTCTGTCTCAGTATCCTACCTGCAGCTTTATATGGAGAGCATACAGGACCTTCTTGACCCTGCAAACGATAACATTTCCATTGTAGAAGATCCTAAAACTGGTGATGTTTCGGTACCTGGGGCTAGCCTTGTAGAAATTAGACACCAGGAGAGCTTTGTGGAACTACTAAGATTGGGGGAAGCTCATCGGTTTGCTGCAAATACAAAACTGAACACTGAATCTTCTCGTAGTCATGCAATTCTCATGGTACACGTAAAGCGGTCTCTAAAAGGAAGGGATTCAACTCTGTCAAGTGATATTGGTGGGAATTCTCATTTGGTTAAGACCTTGAAACCTCCAATCATTCGGAAGGGAAAATTAGTGGTGGTGGATCTTGCTGGTTCTGAGCGCATTGACAAGTCAGGAAGTGAAGGGCATACACTTGAAGAAGCCAAATCCATCAATCTCTCCCTGAGTGCATTAGGGAAATGCATAAATGCACTTGCTGAGAATAGTGCACATGTTCCAGTTAGGGATTCAAAGCTGACAAGATTACTTCGGGATTCATTTGGAGGAACAGCGAGAACTTCATTGGTTATTACTATTGGTCCTTCACCTCGACATCGTGGAGAGACTACGAGTACAATAATGTTTGGCCAACGGGCTATGAAGGTGGAAAATATGCTGAAGATAAAAGAAGAATTTGATTATAAAAGTTTGTCAAGAAGATTAGACATTCAACTAGACAAACTGATTGCAGAACATGAAAGGCAGCAAAAGGCGTTTGAGAATGAAATTGAAAGAATTACCAAAGAAGCACAGGATCGCATATCTGAGGCTGAAAGAAGTTATTCAAATGCCCTGGAGAAGGAAAGGCTGAAATATCAGAAGGATTACATGGAATCAATCAAGAAGCTTGAGGATCAGCTGATGGTGAAGCAGAAGAAGCTTGGTGGGGAGAAAGTAATTAATGAAGAGGTTGCTGCTTCTGCTTCTAGTGTAATTGCTAATGGAGAGGGTTTGACAGCGTCTGCTGACAAGGAAGTGGTAGAGCTAAAGAAGTTGGTTAAAAAGGAAACGCTCTTGAGGAAAGCAGCTGAAGAGGAAGTTAACAATCTTAGAAATCAAGTAGCCCAACTGAAGAGATCAGAGATGTCATGCAATTCCGAGATCTCAAAGCTCCGCAAGACTCTGGAAGATGAGCAAAATCAGAAAAAGAAACTAGAAGGAGATATAGCTATGCTACAAAGCCAGTTGTTGCAATTGAGCTTTGAAGCAGATGAGACCAGTAGGCGACTCGACAGAGGTGAGCCTGGGAAAGTCATGGGTTCTCTAGATGCTCTCGTACAACAAGTTAAGCACTCACAGGCTCAGGACGCTGGAAATGGGGAGAAGGCTTCTGTAGCCAAACTCTTTGAGCAAGTGGGACTGCAAAAGATCTTATCATTGCTGGAAGCTGAAGATTACGATGTCAGAATTCATGCTGTGAAAGTTGTTGCAAATCTAGCAGCTGAAGAAACAAATCAGCAAAAGATTGTTGAGGCTGGGGGCCTTTCATCTTTGCTGATGCTACTCAGAAGCACTGAGGATGAGACAATACACAGAGTTGCTGCAGGTGCAATTGCAAATCTGGCTATGAATGAGACCAACCAAGAGCTTATTATGTCCCAAGGAGGTATTAGTTTGCTGTCCATGACCGCTGCCAATGCTGAGGATCCCCAAACGCTTCGTATGGTTGCCGGAGCAATTGCCAATTTGTGTGGCAATGATAAGTTGCAGACGAAGCTAAGGGGAGAAGGCGGTATTAAGGCATTGCTTGGTATGGTAAGATGCAGACATCCTGATGTTCTTGCACAAGTTGCTAGAGGAATTGCAAATTTTGCAAAATGCGAGTCGAGGGCCTCTACACAAGGAACAGGGACAAAGGCAGGAAAGTCTTTCTTAATTGAAGATGGAGCACTCCCATGGATTGTACAGAATGCCAACAATGAAGCATCAACGATCAAACGACATATCGAACTTGCACTCTGTCATTTAGCACAGCATGAAGTGAATGCAAAAGACATGATCAGTGGAGGTGCCCTGTGGGAATTGGTTCGGATATCACGGGACTGTTCACGGGAAGACATAAGAACTCTTGCGCATCGAACATTAATATCAAGCCCAACATTTCAAGCTGAAATGAGACGATTACGAATAGATTATTGA 2757 43.71 MAASGGTSYRNGATSRNSLKLDKPFSANSNPKSSLKSKSLPTSALRRSSPASLGAAKDDGGVPGRVRVAVRLRPRNTEELIADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTIMAYGQTGTGKTYTLGRLGEEDTADRGIMVRAMEDILAEVSLETDSVSVSYLQLYMESIQDLLDPANDNISIVEDPKTGDVSVPGASLVEIRHQESFVELLRLGEAHRFAANTKLNTESSRSHAILMVHVKRSLKGRDSTLSSDIGGNSHLVKTLKPPIIRKGKLVVVDLAGSERIDKSGSEGHTLEEAKSINLSLSALGKCINALAENSAHVPVRDSKLTRLLRDSFGGTARTSLVITIGPSPRHRGETTSTIMFGQRAMKVENMLKIKEEFDYKSLSRRLDIQLDKLIAEHERQQKAFENEIERITKEAQDRISEAERSYSNALEKERLKYQKDYMESIKKLEDQLMVKQKKLGGEKVINEEVAASASSVIANGEGLTASADKEVVELKKLVKKETLLRKAAEEEVNNLRNQVAQLKRSEMSCNSEISKLRKTLEDEQNQKKKLEGDIAMLQSQLLQLSFEADETSRRLDRGEPGKVMGSLDALVQQVKHSQAQDAGNGEKASVAKLFEQVGLQKILSLLEAEDYDVRIHAVKVVANLAAEETNQQKIVEAGGLSSLLMLLRSTEDETIHRVAAGAIANLAMNETNQELIMSQGGISLLSMTAANAEDPQTLRMVAGAIANLCGNDKLQTKLRGEGGIKALLGMVRCRHPDVLAQVARGIANFAKCESRASTQGTGTKAGKSFLIEDGALPWIVQNANNEASTIKRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCSREDIRTLAHRTLISSPTFQAEMRRLRIDY 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11372029 11381867 + XM_039018875.1 Bhi12g00358 52170

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00358 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 699 742 IPR000225 GO:0005515
Bhi12g00358 918 SUPERFAMILY ARM repeat 647 901 IPR016024 -
Bhi12g00358 918 SMART arm_5 772 812 IPR000225 GO:0005515
Bhi12g00358 918 SMART arm_5 688 729 IPR000225 GO:0005515
Bhi12g00358 918 SMART arm_5 730 771 IPR000225 GO:0005515
Bhi12g00358 918 SMART arm_5 648 687 IPR000225 GO:0005515
Bhi12g00358 918 Gene3D - 749 904 IPR011989 -
Bhi12g00358 918 PANTHER KINESIN-RELATED 47 910 IPR027640 GO:0003777|GO:0007018
Bhi12g00358 918 SMART kinesin_4 63 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00358 918 Coils Coil 532 601 - -
Bhi12g00358 918 PANTHER KINESIN-LIKE PROTEIN KIN-UA 47 910 IPR033291 GO:0008017|GO:0032886|GO:0048364
Bhi12g00358 918 MobiDBLite consensus disorder prediction 1 60 - -
Bhi12g00358 918 Gene3D Kinesin motor domain 58 438 IPR036961 -
Bhi12g00358 918 Pfam Kinesin motor domain 71 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00358 918 CDD KISc 65 406 - -
Bhi12g00358 918 ProSiteProfiles Kinesin motor domain profile. 65 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00358 918 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 658 700 IPR000225 GO:0005515
Bhi12g00358 918 Gene3D - 627 748 IPR011989 -
Bhi12g00358 918 MobiDBLite consensus disorder prediction 1 49 - -
Bhi12g00358 918 PRINTS Kinesin heavy chain signature 141 162 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00358 918 PRINTS Kinesin heavy chain signature 309 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00358 918 PRINTS Kinesin heavy chain signature 358 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00358 918 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 444 IPR027417 -
Bhi12g00358 918 Coils Coil 431 473 - -
Bhi12g00358 918 Coils Coil 479 499 - -
Bhi12g00358 918 Pfam Armadillo/beta-catenin-like repeat 691 728 IPR000225 GO:0005515
Bhi12g00358 918 ProSitePatterns Kinesin motor domain signature. 308 319 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00358 - - K10396 csv:101209471 1652.11
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01335 Bhi-Chr4:33478797 Bhi12g00358 Bhi-Chr12:11372029 1.99E-100 dispersed
Bhi12g00356 Bhi-Chr12:11371641 Bhi12g00358 Bhi-Chr12:11372029 0 dispersed
Bhi12g00358 Bhi-Chr12:11372029 Bhi08g00657 Bhi-Chr8:22373911 8.41E-58 dispersed
Bhi12g00357 Bhi-Chr12:11371646 Bhi12g00358 Bhi-Chr12:11372029 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g464 . . . . . . . . . . . Cma15g01176 . Car15g01064 . . . . . . . . . . . . . . . . . Cone8ag0352 . . . . . Chy09g01147 . . . . . . . . . . . Cmo15g01237 . . Car06g00966 . . . Bhi12g00358 . . . . . . . . . . . . . . . . Cme09g01679
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001054 3 5 3 2 3 2 5 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 5 2 3 80
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00358 Bhi_Chr12 FPKM 2.609418 2.760125 3.803193 4.238464 4.250631 4.092039 3.858014 0.0 0.0 0.0