Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00362 GAAAAAAAAATGTTTATTTTTTTTCTTAAAATAGATCAGCATGGTTTAGGCCTTGTGTTGAGCTTAACTGTTTCTTTTTAGCAAAACTCTTCAAGTAAACAGTCATTTTTTAAGTTTTGTAGGTCATATAAGATTATAATTCAATGTAAAGTCCTTTCTCATAATTTTTCATGCTATTTAAAAAATATATATTTATGTACAAAAAAAAAAAAAGAAACTACCAAACTTCTAATTTTTTAGCTTTTAATTCATTTTCATTTTTCTGGGTTTTGATTTTGAAGAGTTTCCTTCTTCTTCCTTTCTGATGAGGGATTGGAAATTACAGTATGAAAAATGAGTTTTCATAAATAGTTGGAGGAAATATTTGTTGGGTGTTTTTTTTTTCCGTCTCTATTTTTGTCTTTTTTTTTTGTTTTTTCTTTCTTTCTTTTTAAGTAATGGAGGGAAGGGATGGTGGTGGTGCAAGTAGTGGGGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTACAAAATAGCTCCGAGGACCTCAGATAACCCACCGCAGACTGGTGGATCAACGCCGCCGCCGGCGACTCAATCAACTTCGACGCCGTCGGCTTCAGCTCAAGTATCTGCGCAGCCTCCGCCGCCTACGGCGGCCTCCTCAGTACCGGGAAAGAAGAAAAGAGGGAGACCCAGAAAGTATGGACCCGATGGCTCTGTTTCTATGGCTCTGTCTCCCAAGCCGATATCGTCATCAGTGCCGCCGCCGGTGATCGACTTCTCGACGGAGAAGAAGGGGAAAGTACGGCCGGCGACCGCTGTGAGTAAAAGCAAGTTCGAAGTGGATAATTTAGGTGACTGGGTTCCATGTTCTGTTGGTGCAAATTTTACGCCTCATATCATCACTGTCAATGCGGGCGAGGATGTCACGATGAAGATCATATCCTTTTCTCAACAAGGGCCTCGAGCTATTTGCATTTTGTCTGCGAACGGTGTGATCTCAAGTGTCACTCTCCGTCAGCCTGATTCCTCTGGAGGAACACTAACTTATGAGGGACGCTTTGAAATACTTTCCTTGTCTGGCTCATTCATGCCTAGTGACAATGGAGGAACTAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGACGGGCGTGTCGTAGGTGGTGGAGTAGCTGGTCTATTAGTAGCAGCAAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTATCTGGAAATCAACACGAGCAGAAACCGAAAAAGCCAAAACATGATACTATTTCACCGGCCCCGCCAACTGCTGCTATTCCAATATCTTGCGTTGATCCTAAGTCCAACCTCTCGCCTTCCAGTTCCTTTCGTGGCGATAACTGGTCAATGCTGCCAACTGATTCAAGGAATAAGTCAACTGATATCAATGTATCCCTACCCAGTGCTTGATTTTTGAGCTGCATAGCTTATTGTGGAAATCTCCCCTCTCCCATTTGCCATCATCAAACTTACTAGTTGGTGGATATTTCACATTTTGTTTCATGATCTCTGTAACTTACCATTGTACTTCGTCCAATGTAGAATTTTAAGCCCCCCCCACTGCTCCTGTTGATCCCTCTCAGTTAGCTTTTCACTTGTTAGAGTAGCTATAGGCTCCCCGATGCTACCGCGTCGAGTCGAGTAGAATATTTTGATGTAATGTGAACAACTTTCACTTTTGTTTCATATCAATGGATTGTGATTTTATGTTTC 1733 42.24 MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTPPPATQSTSTPSASAQVSAQPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPATAVSKSKFEVDNLGDWVPCSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKHDTISPAPPTAAIPISCVDPKSNLSPSSSFRGDNWSMLPTDSRNKSTDINVSLPSA 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11552692 11556997 + XM_039050679.1 Bhi12g00362 52174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00362 330 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 260 IPR005175 -
Bhi12g00362 330 MobiDBLite consensus disorder prediction 264 330 - -
Bhi12g00362 330 MobiDBLite consensus disorder prediction 294 330 - -
Bhi12g00362 330 MobiDBLite consensus disorder prediction 1 105 - -
Bhi12g00362 330 CDD DUF296 146 237 IPR005175 -
Bhi12g00362 330 MobiDBLite consensus disorder prediction 29 64 - -
Bhi12g00362 330 ProSiteProfiles PPC domain profile profile. 142 281 IPR005175 -
Bhi12g00362 330 Gene3D - 147 276 - -
Bhi12g00362 330 SUPERFAMILY AF0104/ALDC/Ptd012-like 144 265 - -
Bhi12g00362 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 328 - -
Bhi12g00362 330 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 328 IPR039605 GO:0003680
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00362 Bhi-Chr12:11552692 Bhi12g00573 Bhi-Chr12:18064211 1.81E-90 dispersed
Bhi01g00266 Bhi-Chr1:5009724 Bhi12g00362 Bhi-Chr12:11552692 3.47E-109 transposed
Bhi04g01204 Bhi-Chr4:29285074 Bhi12g00362 Bhi-Chr12:11552692 1.11E-65 transposed
Bhi07g00033 Bhi-Chr7:2121313 Bhi12g00362 Bhi-Chr12:11552692 4.00E-126 transposed
Bhi10g00097 Bhi-Chr10:2180845 Bhi12g00362 Bhi-Chr12:11552692 8.21E-26 transposed
Bhi11g00147 Bhi-Chr11:3375138 Bhi12g00362 Bhi-Chr12:11552692 1.64E-52 transposed
Bhi12g00246 Bhi-Chr12:7653795 Bhi12g00362 Bhi-Chr12:11552692 2.27E-56 transposed
Bhi01g01245 Bhi-Chr1:25459542 Bhi12g00362 Bhi-Chr12:11552692 1.10E-84 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00362 - - csv:101210208 528.094