Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi12g00406 | TTTTTTTGTTTTTTTTTTTTTTGGTATTGTGAAAATAACTTTGTTTCAAAACTCATTATCATCAAAGAGAAAGGAAAAGAAAAGAAAAAGGCAGATCCAAGGAAGGTGGTTAATCTGTCAATCCCATCAATCAGTCAAACCCCAATCTAGATCGACTCCGACCAATCATCAATCAAAATTTTTTTTTTCATAAAAGTGAAGAATTACAATAATTTTTTTGGATATGTCATCTTCTTCATCTTCTTCTTCTTCACCTACTTCTACTACTACTACGACTACGTTATCTCAACAACATCTGCAGCAGCAGCAGCAGCAACAGCAGCTGGACCACCACCTTCCTTCTCCTGAGCAACTCTGTTATGTCCATTGTAATATTTGCGACACTGTCCTTGCGGTTAGTGTTCCTTGTTGTAGTTTGTTTAAAACTGTGACAGTGCGATGTGGACACTGCACTAATCTGTTGCCTGTCAACATGCGTGGCCTTCTTCTGCCTTCACCTAATCAATTTCATCAGCTTGGCCACTCTTTCTTTTCTCCTTCTCATAACATTCTCGAAAATATGGCTACACCAAATTCCAATTATCTCATCAACCAGTTTGGAGCTACTACTAACAATTTTGGAATGCCATCTCGAGGAGTTACTGACGAGCTCCCTAGGCCACCCGTTATCAATAGACCTCCGGAGAAGAGACAGAGAGTGCCTTCTGCATACAACCGTTTCATCAAGGACGAGATCCAACGAATCAAGTCTGTGAATCCCGATATATCCCATAGGGAAGCCTTCAGTGCCGCTGCTAAGAATTGGGCCCACTTTCCACACATTCACTTTGGTCTCATGCCCGACCAGACAGTGAAGAAGACAAATATCCGCCAGCAGGAAGGAGATACTCAGAATGTTCTGATGAAAGATAATGGATTCTATGCTTCAGCCAATGTTGGTGTCTCCCACTTCTGAGTCATTGGTGGGGTTATTATATCATATGGATATCTGTTTTTCTCTCTCAACTACCACCAAAATTCCTATCATCATTATTACTTACTTTTTAATCCCATCTACTACTACTACTAGTGCTCATGTGTTGATATATTAATTATATCTTAAATACTCTCTACTCCTAAGTTAGCTACCATGTAATTTCCCTTTTAATGTTATGTTGATTATGAACTAGCTACTATATATTTGGCTCACTACCACTACTACTTGATCAATGCATCTTAATTAGTGTGTTGTCATGACTA | 1239 | 39.06 | MSSSSSSSSSPTSTTTTTTLSQQHLQQQQQQQQLDHHLPSPEQLCYVHCNICDTVLAVSVPCCSLFKTVTVRCGHCTNLLPVNMRGLLLPSPNQFHQLGHSFFSPSHNILENMATPNSNYLINQFGATTNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNIRQQEGDTQNVLMKDNGFYASANVGVSHF | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 13603558 | 13606650 | - | XM_039051060.1 | Bhi12g00406 | 52218 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi12g00406 | 243 | Pfam | YABBY protein | 41 | 204 | IPR006780 | GO:0007275 | |
Bhi12g00406 | 243 | PANTHER | PROTEIN YABBY 6-RELATED | 1 | 241 | IPR006780 | GO:0007275 | |
Bhi12g00406 | 243 | PANTHER | AXIAL REGULATOR YABBY 3 | 1 | 241 | - | - | |
Bhi12g00406 | 243 | SUPERFAMILY | HMG-box | 148 | 197 | IPR036910 | - | |
Bhi12g00406 | 243 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Bhi12g00406 | 243 | Gene3D | High mobility group box domain | 149 | 212 | IPR036910 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi07g01472 | Bhi-Chr7:43206383 | Bhi12g00406 | Bhi-Chr12:13603558 | 3.62E-41 | dispersed | |
Bhi07g01473 | Bhi-Chr7:43206383 | Bhi12g00406 | Bhi-Chr12:13603558 | 2.75E-41 | dispersed | |
Bhi10g00205 | Bhi-Chr10:4368030 | Bhi12g00406 | Bhi-Chr12:13603558 | 5.26E-44 | dispersed | |
Bhi10g00206 | Bhi-Chr10:4368030 | Bhi12g00406 | Bhi-Chr12:13603558 | 7.42E-59 | dispersed | |
Bhi12g00406 | Bhi-Chr12:13603558 | Bhi02g00976 | Bhi-Chr2:21993237 | 1.31E-57 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2591 | PF04690 | YABBY | 1.70E-70 | CL0114 | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi12g00406 | K25796 | - | csv:101214748 | 437.573 |