Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00497 ACTACTAACGGCTCTTTCCTTCTCGTTTCACAAATACACCCAACACACCCAAATTCAATCGTTTACTCTCTCTCAATTCACTTTCTTCTAACGGCTCTCTACTTCTTCCAGAATTCAATTCCCATCTGAATTCACCTTCTTCTCAAAATTTCAAGCTTCCATAACCCTAATTTCAATGGATTCATCTTCAAAAGTCAATCCGGGGCGAAAAGTGAGGGCGGTCGTTAAGATCAAAAGCTTACCTGATCAGGAACTAGATGGAGGATCTACGACGTCGTGGATATCTGTGAAGAAGCCTGATGGAGAAGCGTCCGACTCTGTAACCATTTCTTTTGGAGATCAACCACTGAGTCGTAAGGAGACTTATGAAGTAGATTATTGCTATGAGCAAAATGAAGACACTGAAAGCATATTTGCAAGAGAGGTGAAATCTTTGCTTCCTGGAGTCTTCGATGGTCATCATGCAACAGTTATTGCATATGGTGCAAGAGGCACTGGGAAAACTTCTATAATTCAGGGTACTATTGAGAAACCAGGTTTGGCATCATTATCCATTAATGAATTACTTTCAATGGCCAAAGAAAAAGGGAAATCAATTTTCATATCGTACTATGAAGTTTATATGGACTATGTCTATGATTTATTGGATCCAAAACGACCAACAGTTTTGGTGTTGGATAATGGTCAGGGGAAAATACAACTTAAGGGACTTTCGCGGATTCCAGTGAAATCTCTATCAGACTTCTATGGACTATATTTTGTTGGTTCTAGTTCACATAAACAAGGGCAAAAGAATACAAATGAACCCCCTCCCAGAAGGCACAGGGGCTTGATAGTGCATATGTCATCTACCAATGAGTCTGCTTCAGATACTCGTTTTGTTTCCAAGATGAATTTTGTTGACATGGCTGGTTATGAAGATGCGAGAAGGAGAAGTACCGATGGCATGAGCCTTGTCGAAAATAGTAAAATTAACAAGTCCATATATGCCTTGCTTAATGTTGCTTCTGCCTTGAATTCAAATGATAATCATGTGCCATATCGAGAAAGTAAGCTTACACGCATCCTACAAGATTCCTTGGGAGGAGCGCAAAGCAGGATTTTGATGATTAGTTGCTTGAATTCATCATTTTGCCAAGACTCCATCTACATGGCTAACTTAGCGGCTAGATCTTGCCAAGTAACTAAGCGGGTTGCTTCAAGTGTCATTAGGAAAATGAAGAGTTCAACTAATTCCGTGGTGCATTCATCACTTAAAAGCCAGATACCTAAGAGTGTTTCTACAACCACAAAGAACCGGACTATCTCCGGAACTTCTTTTTCTGAAAAGAAGGCTAGTGTTAGTACAACCTCCTCTACAACGAAAGGAAGGAAGTTGTTTGATGATGCAACAAGTTATTTGGGAAAACTGGACAAGGAAACTAAATTGTCAAGTGCATCTTCTTCTAGACATGTACTTATGAAGAATGGAGGACCTATTTCTGTTGTAGACCAGGTGAATCCATTGCCATCTTCTATAAAGCCCAAAGAAGAATCTACCTCTACATTGGAAAAGGAATTGTCGGCGGCAGAAATTTCCAGTACAGTAGAAACTACCATTGTGTCAGAGGGTGTTTCTAATAGCAATCAGGAACCTGAAAAAATTGATGAGAACATGACTGTATTATCTGCCACGGGAGATGGTCAAAACATCAACGAGGGAAACAATTACTCAATGATCAGTATTGATGACCTTCCTATGGAAAGCACACCTGACGTGACCAGTAGCACCAGTTTGCCTGTTGTTCAAAGCTCATATTTGGACAAGGAAAACAATAGTTATGGGATCAATAAAGATTCATCTCCTCCAATTAGTGCACAGTTAAAAGCGTTATCAAACAGGTTGAGATTAATCAGTTCTTCTACACCAACGTGTTTAAAGATCCCTGATCTTGATGATCCATGTGGCTTCATCTCTACTGATGTTGTTATGGAACCAAAGACTCCAACCATGGAACGGAGTTTGCAAGTTTATGATGAACAAGATTTTGCAAGTCCAACTACTCCTTGGGAAACATTAAGCAAGCGCAGCGCGGGTTTGCAGAAATTACTTATGGATGATCTTTTAAAGTTTATTATCTCAGCTAGCAAGGAAGAATTGAAACAATTGAATGGTATTGGAGAGAAGAGAGCAACCTCAATTATTAAACTTCGTGAAAAATCGTTTGAGTCTTTTAAGAGTCTCGATGATTTAATGAAAATCGGCCTATCAGCAAAACAGATTAAAGGATTGTTGAAAAAAGAAGTTGGTGAGCTATTGTTTAATTAGGAGCCAAAGGGAACTGAAGGATCCTTCTTTCTTATTACTGTACTGTACTCTGTAGATCATCATTTTTCCACATGAAATAAGAATGTCTAAATAACGAGTCTATATTTGGTGTGTATGTATAATTTGGTATATAATATACAGAGCTTAGATTAAAATACCATTCCAATACGTGTGATTTGAGTTTCA 2494 38.69 MDSSSKVNPGRKVRAVVKIKSLPDQELDGGSTTSWISVKKPDGEASDSVTISFGDQPLSRKETYEVDYCYEQNEDTESIFAREVKSLLPGVFDGHHATVIAYGARGTGKTSIIQGTIEKPGLASLSINELLSMAKEKGKSIFISYYEVYMDYVYDLLDPKRPTVLVLDNGQGKIQLKGLSRIPVKSLSDFYGLYFVGSSSHKQGQKNTNEPPPRRHRGLIVHMSSTNESASDTRFVSKMNFVDMAGYEDARRRSTDGMSLVENSKINKSIYALLNVASALNSNDNHVPYRESKLTRILQDSLGGAQSRILMISCLNSSFCQDSIYMANLAARSCQVTKRVASSVIRKMKSSTNSVVHSSLKSQIPKSVSTTTKNRTISGTSFSEKKASVSTTSSTTKGRKLFDDATSYLGKLDKETKLSSASSSRHVLMKNGGPISVVDQVNPLPSSIKPKEESTSTLEKELSAAEISSTVETTIVSEGVSNSNQEPEKIDENMTVLSATGDGQNINEGNNYSMISIDDLPMESTPDVTSSTSLPVVQSSYLDKENNSYGINKDSSPPISAQLKALSNRLRLISSSTPTCLKIPDLDDPCGFISTDVVMEPKTPTMERSLQVYDEQDFASPTTPWETLSKRSAGLQKLLMDDLLKFIISASKEELKQLNGIGEKRATSIIKLREKSFESFKSLDDLMKIGLSAKQIKGLLKKEVGELLFN 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 15687279 15700637 + XM_039050814.1 Bhi12g00497 52309

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00497 710 SMART kinesin_4 10 344 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00497 710 PRINTS Kinesin heavy chain signature 94 115 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00497 710 PRINTS Kinesin heavy chain signature 238 256 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00497 710 PRINTS Kinesin heavy chain signature 287 308 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00497 710 Gene3D - 635 707 - -
Bhi12g00497 710 MobiDBLite consensus disorder prediction 419 455 - -
Bhi12g00497 710 SUPERFAMILY RuvA domain 2-like 646 702 IPR010994 -
Bhi12g00497 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 347 IPR027417 -
Bhi12g00497 710 Gene3D Kinesin motor domain 2 337 IPR036961 -
Bhi12g00497 710 PANTHER KINESIN-LIKE PROTEIN KIN-10C 13 704 - -
Bhi12g00497 710 Pfam Kinesin motor domain 56 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00497 710 MobiDBLite consensus disorder prediction 366 396 - -
Bhi12g00497 710 ProSiteProfiles Kinesin motor domain profile. 12 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bhi12g00497 710 PANTHER KINESIN-RELATED 13 704 IPR027640 GO:0003777|GO:0007018
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00497 K10403 KIF22; kinesin family member 22 - csv:101218738 1088.94
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi11g02253 Bhi-Chr11:61533983 Bhi12g00497 Bhi-Chr12:15687279 1.30E-08 dispersed
Bhi11g02254 Bhi-Chr11:61535719 Bhi12g00497 Bhi-Chr12:15687279 7.53E-79 dispersed
Bhi12g00497 Bhi-Chr12:15687279 Bhi02g00014 Bhi-Chr2:330056 5.43E-32 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g714 . Blo15g00172 . . . Bpe07g00933 . . . . . Cma15g01088 . Car15g01000 . . . . . . . . . . Cla01g00444 Cam01g0467 Cec01g0456 Cco01g0478 Clacu01g0466 Cmu01g0444 Cre09g2068 Cone1ag1166 Cone5ag0876 . . . Csa05g00279 Chy09g01230 . . . Bda06g00688 . . . . Bma12g01117 . . Cmo15g01148 . . . . . Cpe13g00262 Bhi12g00497 . . . . . Lcy12g0037 . . . . . . . . . . Cme09g01562
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009133 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 3 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00497 Bhi_Chr12 FPKM 16.34564 18.480013 13.682688 14.739774 11.091329 10.101141 10.109342 16.014803 16.471533 18.107761