Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00508 ATGCAAAATGCACCGCTATTACTCCAATTCCCCATTTTGCCCTCCCCCTTCTCATTCTCCCATCTTTCACTTCCTTCTGCTACTGCTCCTTCTATTCCATTTCTCAGCTCAATAATCCGGAGACGAGTGAGTGGCGAAAACTGCAGCGTTTCTGTTCTTCGGAAAGGAGTTTGTCTTAGGGCAATGCCTTCTGCTGGCGGTGGCGACGGTGACGTGAATGGTGGTGCTTTCTCCGGCTTCAGTCTCACGGAGTCCTCGTTCTTGGCCTCCTTAATGCCTAAGAAGGAGATTGCTGCTGATCGCTTCATCGAGGCCAATCCTGAATTCGATGGACGTGGCGCTCTTATTGCGATTTTTGATAGTGGTGTTGACCCTGCTGCTGCGGGATTACAAGTGACATCGGATGGAAAGCCTAAGATATTGGATATTCTTGATTGTACGGGGAGCGGCGATGTTGATATCTCGAAGGTGGTGAAGGCCGATGCAGATGGTTGCATTATTGGAGCTTCAGGGACTTCTTTGGTTGTCAATTCTTCGTGGAAGAACCCTTCTGGTGAGTGGCATGTGGGCTATAAATTTGTTTATGAGTTATTTACAGACACACTGACTTCTCGTTTGAAGAGAGAGAGAAAGAAGGATTGGGATGAAAAGAACCAGGAGGAGATTGCCAAGGCTGTTAAGGTTCTTGGTGACTTTGATCAGAAACACACGAAGGTGGAGGACCCAAATCTGAAAAGGGTTCGTGAAGACCTCCAATACCAAATTGATATTCTTAAAAAACAAGCGGATTGCTATGATGATAAGGGGCCAGTCATTGATGCTGTTGTTTGGCACGATGGAGAAGTATGGAGGGTTGCTCTTGACACACAAAGCCTCGAGGACAAGCCTACCTCTGGAAAACTTGCCAACTTTGTACCACTAACAAATTATAAGATTGAAAGAAAGTTTGGCGTATTTAGCAAGTTGGATGCTTGTACATTTGTTGTTAATGTGTATGATGAGGGAAATATCTTAAGTATAGTTACAGATTGCTCCCCTCATGGTACTCATGTCGCTGGTATTGCTGCTGCTTTCCACCCAAAGGAACCCTTGTTGAATGGAGTTGCTCCTGGTGCACAACTGATATCTTGTAAAATTGGAGACACACGTTTAGGGTCAATGGAGACTGGAACTGGGCTGACTCGAGCATTGATAGCAGCTGTGGAGCATAAATGCGATCTCATAAATATGAGTTATGGTGAGCCAACATTACTTCCGGACTATGGTCGCTTTATTGATCTCGTTAATGAGGCAGTAAACAAGTATCGGTTAATATTTGTGAGCAGTGCTGGTAATAGTGGGCCAGCTTTGAATACTGTTGGTGCTCCCGGTGGTACGAGTTCAAGCATTATAGGAGTTGGCGCTTATGTCTCTCCATCAATGGCTGCTGGTGCTCATTGTGTGGTTGAAGCTCCCAGTGAAGGGCTTGAATATACTTGGTCAAGTCGTGGACCAACAGCAGATGGAGATCTTGGTGTTAGTATAAGTGCGCCTGGTGCTGCTGTTGCTCCTGTTCCTACGTGGACCCTTCAGAGACGAATGCTTATGAATGGAACCTCTATGGCATCTCCCTCTGCCTGTGGGGGCATTGCATTACTCATTAGTGCAATGAAGGCTGAGAACATTACTGTGAGCCCATATCTTGTGAGGAAGGCTCTTGAGAATACGACCATTCCAGTAGGTTGCTTACCAGAAGATAAATTATCCACTGGACAGGGGCTCATGCAAGTTGACAAGGCATATGAATATATAAGGAAGTCCCACAATGTTCCATATGTCTGGTATAAAGTGAAGATTAATCAATCTGGAAAATTGTCTCCCACAACACGGGGAATTTACTTGAGAGAGGCTAGTGCCTGCCGTCAACTTTCTGAGTGGACAGTACAAATTGAACCCCAGTTTCATGAGGATGCGAATAATTTAGAAGAGTTGGTTCCTTTTGAGGAGTGTATCGAGTTGCATTCCAGTGAAAAAACAGTTGTCACTGTTCCTGATTATTTGCTTCTCACACATAATGGACGGAGCTTCAACGTAGTGGTTGATCCTTCCAATCTTAGTGATGGCCTGCACTATTATGAACTCTATGGGGTTGATTGCAAGGCTCCATGGCGGGGGCCTCTTTTCAGAATCCCAGTAACTATAACAAAGCCAGTAGTTGTGGTGGATCGCCCTCCAATAGTTTCTTTTCCGAGAATGTCGTTTCTACCAGGCCATATAGAGCGGAGGTTCATAGAGGTACCACGTGGTGCTAGTTGGGTTGAAGCGACCATACAAACTACAGGATTTGACACAACGAGGAAATTTTTTATTGACACTGTCCAGATTTTGCCCTTGAAAAGGCCTTTGAAGTGGGAGAGCGTGGTAACATTCTCGTCTCCTGCTTCCAAAAGTTTTTGTTTTCCTGTTGTGGGTGGCCAGACTATGGAATTAGCAATTGCTCAATTTTGGTCAAGTGGCATTGGGAGTCGGGAATCATCACTTGTAGATTTTGAGGTAACATTTCATGGGGTTAGTACCAATAAAGATGAAATAGTGCTTGATGGAAGTGAAGCGCCTGTTAGAATTGATGCTGAAGCCTTGTTGGCATCAGAAAAACTTGCTCCTGCTGCCATCCTGAACAAGATAAAAGTTCCATATCGGCCATGTGAAGCAAAACTTTGCACACTGACTACGAATCGTGACAGATTGCCTTGTGGGAAACAGATTCTATCACTGACACTAACTTACAAGTTCAAATTAGAAGATGTTGCTGAAGTGAAACCTGTTATTCCATTGTTTAATGACCGCATATATGACAACAAATTTGAGTCTCAATTTTATATGATCTCTGATGCAAATAAGCGTATTTATGCTATGGGTGATGCATACCCAAAGTTCCAAAAACTTCCCAAGGGAGAATACAATTTACAGCTACATATAAGGCACGAGGACGTGCAATGTTTGGAAAAAATGAAGCAGTTGGTGGTGTTTATAGAAAGAAAATTGGAGGAGAAGGATACTATTAAATTGAACTTTTTCTCTCAACCCGATGGTCCTATGATGGGGAATGCTGCGTACAAATCCTCAGTTTTAGTTCCTGGGAAAAAAGAAGCATTCTATTTAGGCCCACCATCAAAAGATAAGTTTCCTAAGAATTGTTCTCAAGGATCGGTTCTTGTTGGAGCAATCTCATATGCAAAACTAGGTATTGTAAGTTCAAATGATAAGGAAAGTTCACGGAAGATGCCAGCATATTATCAAATCTCCTTCTTAGTGCCACCAACTAAGCCTGATGAAGATAAGGGTAAAGGTTCTTCTCCAGCCTTGACAAAGACAATTTCTGAGCGTCTAATGGAAGAGGTTCGTGATGCGAAGATCAAATTTCTTTCAAGCCTAAAACCAGAAAGCAATGAAGAGTTTTCAGAATGGAAGAAATTGTGCTCGTCCCTTAAGAGTGAATATCCAAACTACACTCCGCTGCTTTCGAAAGTATTGGAAGGTTTGATCTCTCAGAGACATATTGAGGACAGAAACTGCCATGATGAAGAGGTCATTGATGCTGCAAACGAGGTAGTTGATAGCATAGACCAAGATGAGCTGGCCAAGTATTTTGCACTGAAAAATGATCCAGAAGATGAAGACGTGGAGAAAATCAAGAAGAAGATGGAGGCTACCCGTGATCAATTGGCAGAAGCGCTATACCAAAAAGGACTAGCCTTTGCAGAAATGGAGGCTTTGAAGACCAAGGGTGAGAATGCTTCTACCCTTGTTCCTGAAGATGCAAAAGATGCTGGAAAGTCTGAGGATACTTTTGAAGAGAATTTCAGAGAACTGAGGAAATGGGTAGATGTCAAGTCTTCTAAGTTTGGAACTCTTGCAGTGTTGCGCGAAAAACGCTACGGGAGGCTAGGTACAGCTCTGAAGGTAGTTAATGATGTTATTGAAAATGATGGAGAGCCTCCCAAGAAGAAACTCTATGAACTGAAGTTGTCTTTGCTTAAGGAGATTGGTTGGTTTCATTTGGTATCATATGAAAAGGAATGGATGCATGTACGTTTTCCTTCAAGCCTGCCTTTATTTTAA 4101 43.21 MQNAPLLLQFPILPSPFSFSHLSLPSATAPSIPFLSSIIRRRVSGENCSVSVLRKGVCLRAMPSAGGGDGDVNGGAFSGFSLTESSFLASLMPKKEIAADRFIEANPEFDGRGALIAIFDSGVDPAAAGLQVTSDGKPKILDILDCTGSGDVDISKVVKADADGCIIGASGTSLVVNSSWKNPSGEWHVGYKFVYELFTDTLTSRLKRERKKDWDEKNQEEIAKAVKVLGDFDQKHTKVEDPNLKRVREDLQYQIDILKKQADCYDDKGPVIDAVVWHDGEVWRVALDTQSLEDKPTSGKLANFVPLTNYKIERKFGVFSKLDACTFVVNVYDEGNILSIVTDCSPHGTHVAGIAAAFHPKEPLLNGVAPGAQLISCKIGDTRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFIDLVNEAVNKYRLIFVSSAGNSGPALNTVGAPGGTSSSIIGVGAYVSPSMAAGAHCVVEAPSEGLEYTWSSRGPTADGDLGVSISAPGAAVAPVPTWTLQRRMLMNGTSMASPSACGGIALLISAMKAENITVSPYLVRKALENTTIPVGCLPEDKLSTGQGLMQVDKAYEYIRKSHNVPYVWYKVKINQSGKLSPTTRGIYLREASACRQLSEWTVQIEPQFHEDANNLEELVPFEECIELHSSEKTVVTVPDYLLLTHNGRSFNVVVDPSNLSDGLHYYELYGVDCKAPWRGPLFRIPVTITKPVVVVDRPPIVSFPRMSFLPGHIERRFIEVPRGASWVEATIQTTGFDTTRKFFIDTVQILPLKRPLKWESVVTFSSPASKSFCFPVVGGQTMELAIAQFWSSGIGSRESSLVDFEVTFHGVSTNKDEIVLDGSEAPVRIDAEALLASEKLAPAAILNKIKVPYRPCEAKLCTLTTNRDRLPCGKQILSLTLTYKFKLEDVAEVKPVIPLFNDRIYDNKFESQFYMISDANKRIYAMGDAYPKFQKLPKGEYNLQLHIRHEDVQCLEKMKQLVVFIERKLEEKDTIKLNFFSQPDGPMMGNAAYKSSVLVPGKKEAFYLGPPSKDKFPKNCSQGSVLVGAISYAKLGIVSSNDKESSRKMPAYYQISFLVPPTKPDEDKGKGSSPALTKTISERLMEEVRDAKIKFLSSLKPESNEEFSEWKKLCSSLKSEYPNYTPLLSKVLEGLISQRHIEDRNCHDEEVIDAANEVVDSIDQDELAKYFALKNDPEDEDVEKIKKKMEATRDQLAEALYQKGLAFAEMEALKTKGENASTLVPEDAKDAGKSEDTFEENFRELRKWVDVKSSKFGTLAVLREKRYGRLGTALKVVNDVIENDGEPPKKKLYELKLSLLKEIGWFHLVSYEKEWMHVRFPSSLPLF 1366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16095152 16132052 + XM_039051114.1 Bhi12g00508 52320

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00508 1366 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Bhi12g00508 1366 Gene3D - 607 739 - -
Bhi12g00508 1366 PRINTS Subtilisin serine protease family (S8) signature 111 130 IPR015500 -
Bhi12g00508 1366 PRINTS Subtilisin serine protease family (S8) signature 343 356 IPR015500 -
Bhi12g00508 1366 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Bhi12g00508 1366 ProSiteProfiles Serine proteases, subtilase domain profile. 85 594 - -
Bhi12g00508 1366 PANTHER PEPTIDASE S8 73 1267 - -
Bhi12g00508 1366 Gene3D Peptidase S8/S53 domain 271 604 IPR036852 GO:0004252|GO:0006508
Bhi12g00508 1366 Gene3D Peptidase S8/S53 domain 94 186 IPR036852 GO:0004252|GO:0006508
Bhi12g00508 1366 Coils Coil 1221 1241 - -
Bhi12g00508 1366 Coils Coil 248 268 - -
Bhi12g00508 1366 SUPERFAMILY Subtilisin-like 97 608 IPR036852 GO:0004252|GO:0006508
Bhi12g00508 1366 PANTHER TRIPEPTIDYL PEPTIDASE II 73 1267 - -
Bhi12g00508 1366 Gene3D - 210 267 - -
Bhi12g00508 1366 Pfam Subtilase family 111 570 IPR000209 GO:0006508|GO:0008236
Bhi12g00508 1366 Pfam Tripeptidyl peptidase II 874 1059 IPR022229 -
Bhi12g00508 1366 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 91 573 IPR034051 GO:0006508|GO:0008240
Bhi12g00508 1366 ProSitePatterns Serine proteases, subtilase family, histidine active site. 347 357 IPR022398 -
Bhi12g00508 1366 Gene3D - 1117 1366 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00508 K01280 TPP2; tripeptidyl-peptidase II [EC:3.4.14.10] - csv:101220162 2488.76
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g697 Blo06g01128 . . . . . . . . . . Cma15g01096 . Car15g01007 . . . . . . . . . . Cla01g00436 . . Cco01g0470 . . Cre09g2075 . Cone5ag0871 . . . . . . . . . Bda15g00725 . . Bma08g00301 . . . Cmo15g01154 . . . . . Cpe13g00255 Bhi12g00508 . . . . . Lcy12g0027 . . . . . . . . . . Cme09g01554
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005749 1 1 2 3 0 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 2 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00508 Bhi_Chr12 FPKM 13.292503 15.668954 28.744726 29.750927 18.448843 17.345343 18.315557 44.964989 41.186939 45.392601