Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00515 TAATCTTGAGGGAGAGAGAAAAAGAAAGAAAAAAAAGACTGCTCTTTTTAATTTTCAATTTCAAAGTTTCAAATCCCATGTGCATATTTCTCTTCCACCTATATAAAACCTCTTCAATCCATCAAACTCCAATAAATTTCTCATCTTTTCTCTCTCTCTCTAAATTTTACTGTGAAATCCAAATTTGAATCTGGGTTTTGAAGATTCAGGGGAATTATGTACCAGAACACTACAGAGTCCGATTTTGGTTTCCTTGACCCAATTCGCCGCCATTTATTGGGCGAATCGGAGATTTCCGCCGCCGCCGCCGCTCCCGGCGGCAGACCCACTCCCGTTTTCAGTCGGAGTGGTAGTTTCAGTAGCTTAATTCCATGCCTTGAAGACAATTGGGGTGATTTGCCTCTCAAGGTCGACGATTCTGAAGATATGATGCTTGCCGCCGTTCTCCGGGATGCTGTCAGTGCTGGATGGGTTCCGTCGCTTGGAAGCTGCGATTTCGGGTTTTCCACGGTGAAATCAGAGTCGGAGCTGCTTCCGGTGAGTTTTCCAGTGGTGCTACCGAATATGGCGGTGAAGCCGGCGGTGGTACCGGAGAAGGGAAAGCATTATAGAGGAGTACGGCAACGGCCGTGGGGGAAATTCGCAGCGGAGATTCGAGACCCGGCGAAAAATGGTGCTAGGGTTTGGCTTGGAACGTACGAGACGGCGGAGGATGCGGCGTTAGCTTATGATCGGGCGGCTTACCGAATGCGAGGATCAAGGGCTCTGCTCAATTTCCCCCTCCGTGTCAACTCCGGCGAGCCCGAACCGGTTCGGGTCACGTCGAAGCGATCATCGCCAGAGGTTTCATCGTCGCCGAAGCGGCGGAAGAAAGTTGGCTCCGCCGTAGAAAGTGGAGGAGTACCAAGGGAGCAACAAGTGGCAAGCTTTACAAATGGAGGGCAGCTGTTTGTTAGCCAATGCTAACATTTAGCCAATAAATACAAAAAGCTCTTTTATTTATTTTTTTAATGAAAAAAGTTTTAGAAAGATATTGTGAAGAGGGGATGTTGTTTTTGGTTTTGCTTGGATTTGTTGATATATAATTTGTCAATATTAATATTTGAAGTTAATTAACAGTTGAAATTTCAAAAGACCCAAAA 1142 46.06 MYQNTTESDFGFLDPIRRHLLGESEISAAAAAPGGRPTPVFSRSGSFSSLIPCLEDNWGDLPLKVDDSEDMMLAAVLRDAVSAGWVPSLGSCDFGFSTVKSESELLPVSFPVVLPNMAVKPAVVPEKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPEPVRVTSKRSSPEVSSSPKRRKKVGSAVESGGVPREQQVASFTNGGQLFVSQC 249
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 16495962 16497103 + XM_039019486.1 Bhi12g00515 52327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00515 249 Gene3D AP2/ERF domain 129 191 IPR036955 GO:0003700|GO:0006355
Bhi12g00515 249 ProSiteProfiles AP2/ERF domain profile. 130 188 IPR001471 GO:0003700|GO:0006355
Bhi12g00515 249 PANTHER DNA-BINDING DOMAIN 24 225 IPR044808 GO:0003700|GO:0009873
Bhi12g00515 249 Pfam AP2 domain 130 180 IPR001471 GO:0003700|GO:0006355
Bhi12g00515 249 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
Bhi12g00515 249 PRINTS Ethylene responsive element binding protein signature 154 170 IPR001471 GO:0003700|GO:0006355
Bhi12g00515 249 CDD AP2 129 188 IPR001471 GO:0003700|GO:0006355
Bhi12g00515 249 PANTHER BNAANNG21280D PROTEIN 24 225 - -
Bhi12g00515 249 MobiDBLite consensus disorder prediction 195 241 - -
Bhi12g00515 249 SMART rav1_2 130 194 IPR001471 GO:0003700|GO:0006355
Bhi12g00515 249 SUPERFAMILY DNA-binding domain 130 190 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02578 Bhi-Chr1:63316066 Bhi12g00515 Bhi-Chr12:16495962 4.13E-47 dispersed
Bhi11g00056 Bhi-Chr11:1103356 Bhi12g00515 Bhi-Chr12:16495962 4.43E-33 dispersed
Bhi11g00058 Bhi-Chr11:1237477 Bhi12g00515 Bhi-Chr12:16495962 3.15E-103 dispersed
Bhi12g00515 Bhi-Chr12:16495962 Bhi05g01124 Bhi-Chr5:40565766 1.03E-23 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2595 PF00847 AP2 9.10E-15 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00515 K09286 - csv:101221583 412.535