Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00530 TTCTTTGGGCTGGGCCGGCCCAGTCCGGCCCAATGATGAGGCTGATAACTGGCATCCCCTTTCCTCCTCCTTCTTCCTCTTTCTCCCTCTCGAATTTTCAATTCTCCGAATTCACAGCGAAGCGAAGGCTGTAGCTTCCGTTACTCGTCTGGTTTCAGCTTCTTTTCCGCTTTGCAAGGGTCCTCTGCGTCTTGTTGAAATAGCGACCAGGATCGCAGATCACAGGCACATTGCAATCTGGTGGTTAAGAACTTGTAGGATATGTGATTATTGATTGATAACTTTAAAGAAAGAGGGATCAATTCTTTCTCTATATTTTTAGTTGAGTACTGAACGTATCTGTTGTTCGATCATGTGTTTTTGAGGTTCGCTGATGTCTATGAACAGCTACTTGGACGCTGGCCACCAACGATTGGTGCCCCAAATGGCAGCTTCTAGGGTGACTGGAGGATTAGCACAATCTTCCTCAAGTTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCCAAGGCTACTGTTAAATCTCACTTGGGCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGCACTGGCCATTCAAATTTGGGTCCAGTTTCTGGGGACACGAATAATGGTGTGTTTAATAGTGTGGCAGATTCAGGACCAAGTGTTGGGGCAAGTTCTCTGGTTACAGATGCAAACTCTGCACTTTCAGGTGGGCCTCACTTGCAGAGAAGTCCAAGCATGAATGCGGAATCATACATGCGATTACCTGCATCACCCATGTCTTTTACATCAAATAACATGAGCATCTCAGGTGCATCACTTATTGATGCATCTTCTGTACTGCAGCACAATTCTCAGCAGGATCATAATGCCCCCCAATTGCCACAGAACCAGCCACAGGCCCGACAAGTTTCTTCAGGTGATGCATCAATGTCAAATTCACAAACCATCCAAACTTCACTGCCCATGGGTGCACGTGTCTCTGGATCTCTCATGACAGATCCCAACAGTTATTCTCAGTCACAGAAGAAACCACGTTTGGATATTAAGCAGGATGATTTTCTGCAACAGCAGTTACTACTACAACAGCTACTGCAGAGACAAGAGTCCATGCAATTGCAAGGTCGTAATACGCCTCAGTTACAAGCAGCATTATTTCAGCAGCTACAGAGATTACGACAACAGCAACAAATTTTTCAGTCTTTGCCTCCTTTGCAGAGAGCTCATATGCAGCAGCAGCAGCAGATACAATTGAGGCAGCAACTTCAGCAACAGACAATACAGCCTGTTAATGCTATGAAGCGGCCTCATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTACTTATACCATCAGCGTCAAAGGCCTGCTGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACTGAATATTATTCCCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAACAATGTTGGACATCATGCACTTGGTGTTTTCCCTCAAGCAGCTATGGATGCATGGCAGTGTGACATTTGTGGTTCAAAATCTGGACGGGGATTTGAGGCATCTTTTGAAGTGCTTCCTAGACTTAATGAGATCAAATTTGGCAGTGGAGTTATTGATGAGCTATTGTTCTTGGATATGCCACGGGAATGCAGATATCCATCTGGAATTATGATGTTAGAATTTGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGACAGCTTCGTATCATATTTAATCATGAATTGAAGATATTGGTATGGGAATTTTGTGCAAGACGCCATGAAGAACTTCTTCCTCGTAGACTGGTTGCACCTCAGGTGAATCAGTTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCTGATGGGGCTTCTCAGCAGGATCTACAAGCAAATAGTAATATGGTTTTGACAGCTGGGCAGCAGCTTGCCAAGAGTCTGGAGTTGCAGTCACTGAATGATTTGGGGTTCTCTAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTCGTCAACAGCATGAAAGATTTGATTGATTTCTGTAGGGAGCAGAAAAACGGACCAGTTGAGGGTCTGAAAAGTTATCCTCAGCATGCCACGGCCAAGCTGCAGATCCAAAAAATGCAAGAGATTGAACAGGTTGCCAATGCTCAGGGTCTGCCAACCGATCGTAACACCCTTAGTAGAATGGTCGCCCTGCATCCTGGGCTAAACCAAATGAATAGCCAAAATCAACTAGTCGGCAGAGGAGCTCTGAGCGATTCGGCACAAGCTGCATTGGCATTGTCTAACTACCAGAATCTGCTAATGAGACAGAACTCAATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGCCATCATCGTCATTCAATAACTCCAACCAGAGTCCTTCATCAAGCTTCCATGGGACAACTGCTATAACATCGGCAACGATGCAGAACTTGCCCAGCAGTGGTTTTTCAAGTCCTAATCTGCCTCAGCAACAATCTCAAGTTCAACACCAACTGCATCAGCGCCCGAACACCAACAATTTACTCGTGCAAAATCATCCTCCAATTACGCAAGGTAATGTTAATAATAACCAGGCTGCGCAACATCAGATGATCCAGCAACTACTCCAGATATCTAATAACAGTGGGAGAGGGCAACGACAACCACTTTCTGGATCAAACACAAAAGGAAGCATTGCTGGAACTTATACGGGCTACAGAGGCAGCTCTTATGCGGCGGCTGTAGGCACAGCCAATGCATCGGGTAGTAATACGCCTACCCCAAGCCGAAGTAACAGTTTCAAAAGTGCTTCAACTGGGGACGTATCAGCAGTCGGTGCTGGTAGCAGTGGGTTCAACCAAAGAACCGCAGGGTTGCCACAAAATCTTCATTTGGATGAGGATATAATCCAGGATATAGCCCATGATTTTACAGATAATGGGTTTTTTAACAGTGATCTTGACGATAATATGTGCTTCGCCTGGAAAGGCCAACTAACTTAAAACAGGCCTAGCAATTGGTTCCCTCCCTTCGGTTAAGTGGAGAACTTACATTTTGTACAGTATATTTGGAATAGATTTTTTTCCCCCTCTTCTTTTTACTTTACTTTTTGTTTTCTTCACAAATGAATGTTGTATTTTCCATGGGAACGTGCCTTCTTAGTAACTCACTAGGTGTTTAGGGATCTTTCTGTATGGTGTTTTTATATTTGTTTTCAAGTACCTCAAAAGTGTAATTTCTGAGTGAAGTCTTACAAAGAGCATTTCTTATTATATTAATGTGATGACAGATTCTAGGATTGGCTTT 3323 44.06 MSMNSYLDAGHQRLVPQMAASRVTGGLAQSSSSSGIFFQGDGQSKATVKSHLGSSYGNSSNSIPGTGHSNLGPVSGDTNNGVFNSVADSGPSVGASSLVTDANSALSGGPHLQRSPSMNAESYMRLPASPMSFTSNNMSISGASLIDASSVLQHNSQQDHNAPQLPQNQPQARQVSSGDASMSNSQTIQTSLPMGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQLLLQQLLQRQESMQLQGRNTPQLQAALFQQLQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQTIQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPRECRYPSGIMMLEFGKAVQESVYEQLRVVREGQLRIIFNHELKILVWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQKNGPVEGLKSYPQHATAKLQIQKMQEIEQVANAQGLPTDRNTLSRMVALHPGLNQMNSQNQLVGRGALSDSAQAALALSNYQNLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSATMQNLPSSGFSSPNLPQQQSQVQHQLHQRPNTNNLLVQNHPPITQGNVNNNQAAQHQMIQQLLQISNNSGRGQRQPLSGSNTKGSIAGTYTGYRGSSYAAAVGTANASGSNTPTPSRSNSFKSASTGDVSAVGAGSSGFNQRTAGLPQNLHLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 881
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17016926 17027597 + XM_039050929.1 Bhi12g00530 52342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00530 881 Pfam LIM-domain binding protein 316 576 IPR029005 -
Bhi12g00530 881 MobiDBLite consensus disorder prediction 657 722 - -
Bhi12g00530 881 MobiDBLite consensus disorder prediction 48 77 - -
Bhi12g00530 881 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 176 878 - -
Bhi12g00530 881 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 22 170 - -
Bhi12g00530 881 MobiDBLite consensus disorder prediction 152 188 - -
Bhi12g00530 881 MobiDBLite consensus disorder prediction 197 215 - -
Bhi12g00530 881 PANTHER LIM DOMAIN-BINDING PROTEIN 176 878 IPR029005 -
Bhi12g00530 881 PANTHER LIM DOMAIN-BINDING PROTEIN 22 170 IPR029005 -
Bhi12g00530 881 MobiDBLite consensus disorder prediction 197 216 - -
Bhi12g00530 881 MobiDBLite consensus disorder prediction 798 834 - -
Bhi12g00530 881 Coils Coil 880 881 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00530 Bhi-Chr12:17016926 Bhi12g00533 Bhi-Chr12:17016990 0 dispersed
Bhi12g00530 Bhi-Chr12:17016926 Bhi12g00531 Bhi-Chr12:17016928 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00530 - - bhj:120092747 1613.2