Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00533 TCCTCCTTCTTCCTCTTTCTCCCTCTCGAATTTTCAATTCTCCGAATTCACAGCGAAGCGAAGGCTGTAGCTTCCGTTACTCGTCTGGTTTCAGCTTCTTTTCCGCTTTGCAAGACAGCTACTTGGACGCTGGCCACCAACGATTGGTGCCCCAAATGGCAGCTTCTAGGGTGACTGGAGGATTAGCACAATCTTCCTCAAGTTCTGGGATTTTTTTCCAAGGAGATGGGCAGTCCAAGGCTACTGTTAAATCTCACTTGGGCTCATCTTATGGAAACTCATCAAATTCAATTCCAGGCACTGGCCATTCAAATTTGGGTCCAGTTTCTGGGGACACGAATAATGGTGTGTTTAATAGTGTGGCAGATTCAGGACCAAGTGTTGGGGCAAGTTCTCTGGTTACAGATGCAAACTCTGCACTTTCAGGTGGGCCTCACTTGCAGAGAAGTCCAAGCATGAATGCGGAATCATACATGCGATTACCTGCATCACCCATGTCTTTTACATCAAATAACATGAGCATCTCAGGTGCATCACTTATTGATGCATCTTCTGTACTGCAGCACAATTCTCAGCAGGATCATAATGCCCCCCAATTGCCACAGAACCAGCCACAGGCCCGACAAGTTTCTTCAGGTGATGCATCAATGTCAAATTCACAAACCATCCAAACTTCACTGCCCATGGGTGCACGTGTCTCTGGATCTCTCATGACAGATCCCAACAGTTATTCTCAGTCACAGAAGAAACCACGTTTGGATATTAAGCAGGATGATTTTCTGCAACAGCAGTTACTACTACAACAGCTACTGCAGAGACAAGAGTCCATGCAATTGCAAGGTCGTAATACGCCTCAGTTACAAGCAGCATTATTTCAGCAGCTACAGAGATTACGACAACAGCAACAAATTTTTCAGTCTTTGCCTCCTTTGCAGAGAGCTCATATGCAGCAGCAGCAGCAGATACAATTGAGGCAGCAACTTCAGCAACAGACAATACAGCCTGTTAATGCTATGAAGCGGCCTCATGATGGTGGTGTATGTGCTCGGCGGCTAATGCAGTACTTATACCATCAGCGTCAAAGGCCTGCTGATAATAGTATTGCCTATTGGAGGAAGTTCGTGACTGAATATTATTCCCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAACAATGTTGGACATCATGCACTTGGTGTTTTCCCTCAAGCAGCTATGGATGCATGGCAGTGTGACATTTGTGGTTCAAAATCTGGACGGGGATTTGAGGCATCTTTTGAAGTGCTTCCTAGACTTAATGAGATCAAATTTGGCAGTGGAGTTATTGATGAGCTATTGTTCTTGGATATGCCACGGGAATGCAGATATCCATCTGGAATTATGATGTTAGAATTTGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGACAGCTTCGTATCATATTTAATCATGAATTGAAGATATTGGTATGGGAATTTTGTGCAAGACGCCATGAAGAACTTCTTCCTCGTAGACTGGTTGCACCTCAGGTGAATCAGTTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCTGATGGGGCTTCTCAGCAGGATCTACAAGCAAATAGTAATATGGTTTTGACAGCTGGGCAGCAGCTTGCCAAGAGTCTGGAGTTGCAGTCACTGAATGATTTGGGGTTCTCTAAAAGATACGTTAGATGCTTGCAGATATCAGAGGTCGTCAACAGCATGAAAGATTTGATTGATTTCTGTAGGGAGCAGAAAAACGGACCAGTTGAGGGTCTGAAAAGTTATCCTCAGCATGCCACGGCCAAGCTGCAGATCCAAAAAATGCAAGAGATTGAACAGGTTGCCAATGCTCAGGGTCTGCCAACCGATCGTAACACCCTTAGTAGAATGGTCGCCCTGCATCCTGGGCTAAACCAAATGAATAGCCAAAATCAACTAGTCGGCAGAGGAGCTCTGAGCGATTCGGCACAAGCTGCATTGGCATTGTCTAACTACCAGAATCTGCTAATGAGACAGAACTCAATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGCCATCATCGTCATTCAATAACTCCAACCAGAGTCCTTCATCAAGCTTCCATGGGACAACTGCTATAACATCGGCAACGATGCAGAACTTGCCCAGCAGTGGTTTTTCAAGTCCTAATCTGCCTCAGCAACAATCTCAAGTTCAACACCAACTGCATCAGCGCCCGAACACCAACAATTTACTCGTGCAAAATCATCCTCCAATTACGCAAGGTAATGTTAATAATAACCAGGCTGCGCAACATCAGATGATCCAGCAACTACTCCAGATATCTAATAACAGTGGGAGAGGGCAACGACAACCACTTTCTGGATCAAACACAAAAGGAAGCATTGCTGGAACTTATACGGGCTACAGAGGCAGCTCTTATGCGGCGGCTGTAGGCACAGCCAATGCATCGGGTAGTAATACGCCTACCCCAAGCCGAAGTAACAGTTTCAAAAGTGCTTCAACTGGGGACGTATCAGCAGTCGGTGCTGGTAGCAGTGGGTTCAACCAAAGAACCGCAGGGTTGCCACAAAATCTTCATTTGGATGAGGATATAATCCAGGATATAGCCCATGATTTTACAGATAATGGGTTTTTTAACAGTGATCTTGACGATAATATGTGCTTCGCCTGGAAAGGCCAACTAACTTAAAACAGGCCTAGCAATTGGTTCCCTCCCTTCGGTTAAGTGGAGAACTTACATTTTGTACAGTATATTTGGAATAGATTTTTTTCCCCCTCTTCTTTTTACTTTACTTTTTGTTTTCTTCACAAATGAATGTTGTATTTTCCATGGGAACGTGCCTTCTTAGTAACTCACTAGGTGTTTAGGGATCTTTCTGTATGGTGTTTTTATATTTGTTTTCAAGTACCTCAAAAGTGTAATTTCTGAGTGAAGTCTTACAAAGAGCATTTCTTATTATATTAATGTGATGACAGATTCTAGGATTGGCTTT 3054 44.07 MAASRVTGGLAQSSSSSGIFFQGDGQSKATVKSHLGSSYGNSSNSIPGTGHSNLGPVSGDTNNGVFNSVADSGPSVGASSLVTDANSALSGGPHLQRSPSMNAESYMRLPASPMSFTSNNMSISGASLIDASSVLQHNSQQDHNAPQLPQNQPQARQVSSGDASMSNSQTIQTSLPMGARVSGSLMTDPNSYSQSQKKPRLDIKQDDFLQQQLLLQQLLQRQESMQLQGRNTPQLQAALFQQLQRLRQQQQIFQSLPPLQRAHMQQQQQIQLRQQLQQQTIQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPRECRYPSGIMMLEFGKAVQESVYEQLRVVREGQLRIIFNHELKILVWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQKNGPVEGLKSYPQHATAKLQIQKMQEIEQVANAQGLPTDRNTLSRMVALHPGLNQMNSQNQLVGRGALSDSAQAALALSNYQNLLMRQNSMNSTSSNPLQQEPSSSFNNSNQSPSSSFHGTTAITSATMQNLPSSGFSSPNLPQQQSQVQHQLHQRPNTNNLLVQNHPPITQGNVNNNQAAQHQMIQQLLQISNNSGRGQRQPLSGSNTKGSIAGTYTGYRGSSYAAAVGTANASGSNTPTPSRSNSFKSASTGDVSAVGAGSSGFNQRTAGLPQNLHLDEDIIQDIAHDFTDNGFFNSDLDDNMCFAWKGQLT 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17016990 17027597 + XM_039050930.1 Bhi12g00533 52345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00533 864 MobiDBLite consensus disorder prediction 135 171 - -
Bhi12g00533 864 MobiDBLite consensus disorder prediction 781 817 - -
Bhi12g00533 864 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 158 861 - -
Bhi12g00533 864 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 153 - -
Bhi12g00533 864 MobiDBLite consensus disorder prediction 7 60 - -
Bhi12g00533 864 MobiDBLite consensus disorder prediction 640 705 - -
Bhi12g00533 864 PANTHER LIM DOMAIN-BINDING PROTEIN 5 153 IPR029005 -
Bhi12g00533 864 PANTHER LIM DOMAIN-BINDING PROTEIN 158 861 IPR029005 -
Bhi12g00533 864 MobiDBLite consensus disorder prediction 180 199 - -
Bhi12g00533 864 MobiDBLite consensus disorder prediction 1 60 - -
Bhi12g00533 864 Pfam LIM-domain binding protein 299 559 IPR029005 -
Bhi12g00533 864 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00530 Bhi-Chr12:17016926 Bhi12g00533 Bhi-Chr12:17016990 0 dispersed
Bhi12g00531 Bhi-Chr12:17016928 Bhi12g00533 Bhi-Chr12:17016990 0 dispersed
Bhi12g00533 Bhi-Chr12:17016990 Bhi12g00797 Bhi-Chr12:23895075 0 dispersed
Bhi12g00532 Bhi-Chr12:17016928 Bhi12g00533 Bhi-Chr12:17016990 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00533 - - bhj:120092747 1578.92