Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00547 TTGAACTCCTATAAAAAGCAAACTAAAATGGCAAAGAGAGGGAGAGATATAGAATATAGTAGCCATAGTGAAAGAGAAATGGAGTTTACAACAAGTTGCATCATTTTCCTTCTCTTCTCATTTCTCTTCTCCCTTCTAATCTTAGTTCGATCACTTACTAGAAAAAGTAACCAAAAGCAACTTCCTCCGGGACCCAAGGCTCACTTTCTCATAGGAAATTTAATGGAGATTGGTCAAAATCTCCACCAATCTCTGGCCAAACTTGCTGAGTCCTATGGCCCTATCATGACCCTAAAACTAGGCCAAATGACCTCAATAGTGATTTCCTCCCCATCCATGGCCAAGGAAGTCCTCCAAACTCACGATCAAGTTTTATGCGACCGAACGTTTCCCGATGTAGCAACGGTTTATAACCACCACAAAGTCGCATTGGCCTGGCTTCCAGTGTGTGATCTCTGGAGAACTCTTCGAAAACTATGCAACAATCACATGTTTTCCCACAAGAGCCTCGACTCGAGTTACATAATTCGTCATAAGGTAATCCAACACCTTGTGGCTGATGTTCGAAAAAGCGCTGCGAAAGGCGACACCATAGACATTGAAAGACTTGTATTTTCGACCACTCTTGATATGCTTTCGAACATGATTTTTTCAATAGATTTGAGTAGTAAGTACTCAAATATTCATAAATGGGGGCAAGATTTTAAGGAGACTGTTTGGGGGATAATGGAAGAGGCTGGAGGATTAAACATTGGAGATTTTTTTCCAATCTTGAAGAAGATGGACCTCCAAGGATGTCGAAAGCGCATGATGGTTCACATGAACAAATTTTTAGATATCATTGATGAAATGATTGAGAAGAGGATGAAAGAGCCAAAATTAGGAGAAGATATTGACATGCTTCAAAACTTTCTCAACCTTGCCAAAGAAAGTGAAGATCCCAAGTTTGACTTACAATTGATCAAGCATTTGATATTGGTTCTATTTCCAGCTGGAACCGACACGACAACGTCAACAGTAGAATGGGCAATGGCAGAGCTTCTAAGAAACCCAAAAATGCTATCAAAAGCCAAAACAGAGCTCAAAGAAGTGATTGGAGAAGACATGGAAATGAAGGAATCAGACTATTTAAGGCTACCATTTCTTCAAGCAATCATTAAAGAAACTCTAAGACTTCATCCTCCAGCTCCACTTCTCTTACCACATAAAGCCAAACACGACACAGAGATCATTGGTGGCTTTGAAATTCCCAAAAATGCTCAACTTCTTGTGAATGTTTGGAAGATTGGAAGGGACAAAAGTGTTTGGGAAGATGCTGATTTGTTTAAACCAGAGAGGTTTTTAGGGTTAGGATCAAAAGTTGATTATAAAGGGAGGGATTTTGAGTTGATTCCATTTGGTTCTGGAAGGAGAATTTGCCCTGGTTTGCCTTTGGCTACCAAAATGGTGCACTGGATTCTTGGTTCTTTGATTCATTCATTTCATTGGAGACTTGAAGATGGAATTAAACCTGAAACTTTGAATATGGAAGAGAAGGTTGGATTGACTTTGGTTATGGCTCATCCACCCAAGGCTATCCCTTTCAATCAATGATATATGCATGTATGTCATTTAGATTATACCTGTGGCCACTGTTGATATGTTGGAATGTATGTATGTGTGTTCTTAGCTAGTAGGTTGTGTTTGATAACTATTTTAGTAGCAAGTTTTAATGAAAATAATGCTCGTTTGATTACTATTATAAGTGGAGTCTTTGTGCTGGTTCGTGTAAAATCCCACGGACTATTTGATTAT 1794 39.07 MAKRGRDIEYSSHSEREMEFTTSCIIFLLFSFLFSLLILVRSLTRKSNQKQLPPGPKAHFLIGNLMEIGQNLHQSLAKLAESYGPIMTLKLGQMTSIVISSPSMAKEVLQTHDQVLCDRTFPDVATVYNHHKVALAWLPVCDLWRTLRKLCNNHMFSHKSLDSSYIIRHKVIQHLVADVRKSAAKGDTIDIERLVFSTTLDMLSNMIFSIDLSSKYSNIHKWGQDFKETVWGIMEEAGGLNIGDFFPILKKMDLQGCRKRMMVHMNKFLDIIDEMIEKRMKEPKLGEDIDMLQNFLNLAKESEDPKFDLQLIKHLILVLFPAGTDTTTSTVEWAMAELLRNPKMLSKAKTELKEVIGEDMEMKESDYLRLPFLQAIIKETLRLHPPAPLLLPHKAKHDTEIIGGFEIPKNAQLLVNVWKIGRDKSVWEDADLFKPERFLGLGSKVDYKGRDFELIPFGSGRRICPGLPLATKMVHWILGSLIHSFHWRLEDGIKPETLNMEEKVGLTLVMAHPPKAIPFNQ 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 17499269 17502270 - XM_039018749.1 Bhi12g00547 52359

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00547 521 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 SUPERFAMILY Cytochrome P450 53 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 18 519 - -
Bhi12g00547 521 Pfam Cytochrome P450 53 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 18 519 - -
Bhi12g00547 521 Gene3D Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bhi12g00547 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00547 - - - bhj:120067227 1030.01
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00345 Bhi-Chr12:10739659 Bhi12g00547 Bhi-Chr12:17499269 4.69E-164 dispersed
Bhi12g00347 Bhi-Chr12:11037994 Bhi12g00547 Bhi-Chr12:17499269 3.20E-160 dispersed
Bhi12g00547 Bhi-Chr12:17499269 Bhi12g00390 Bhi-Chr12:13079920 7.51E-110 dispersed
Bhi12g00538 Bhi-Chr12:17294821 Bhi12g00547 Bhi-Chr12:17499269 4.97E-100 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g442 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00349 Chy09g01155 . . . . . . . . . . . . . . . . . . Bhi12g00547 . . . . . . Cla01g00330 . . . . . . Lsi09g00352 . . Cme09g01689
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000276 0 5 1 0 1 4 0 5 5 7 5 5 3 10 7 9 5 5 4 5 6 6 4 5 7 13 5 4 4 6 146
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00547 Bhi_Chr12 FPKM 103.640625 104.773796 135.210907 138.590042 16.222275 15.600161 15.480968 3.340774 3.047447 1.726033