Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00624 TAACCAAACCCATACTTGCTAATTTTTTGTCTCCCCCAAAATTTCAGTTTTTTTTGGGGCATTTGGAAAATCTCTGAAGCTCTCAGGGGGTTTTGACAAATGGGTCACTGTACATGGTGATGGTCTTCTCAGATTCAAATCACTTCAAACACGGAGCCCTTCTATTTTTTTCGTATTAGGTATCTTAACTTCTATAGCACTTCCTATCGAGAGCAAAATTTTCTTGAGCTGTAGAACCTGATATTATTGATTGAATTAAAGTTTATAGTTGGACGTGGTTCTCAAGAGTCAGATTCTTAGGGAATTATGGAGTGCAACAAAGATGAGGCAGCTAGAGCAAAAGAAATTGCTGAGAGGAAATTTACAGAGAGAAATTATTCTGCTGCAAAGAAGTTTGTTTTGAAGGCTCAAAATTTGTACCCTGGGCTTGATGGTCTCTCTCAAATGATGACGACTCTCGAAGTGTATATCTCTGCAGATAATAAGATAAATGGGGAAATGGATTGGTATGGGATACTCGGTGTGAACCACTTGGCCGATGATGAGACTATTAGGAGACAATATAGAAAACTGGCTCTTGTCCTTCATCCTGATAAAAACAAGTCACTTGGTGCAGAGGGTGCATTTAAATTGGTTTCAGAGGCGTGGAGTTTGTTATCCGACAAGGCAAAGAGGTTGGCTTATAATCAGAAGAGGGACCCGAAAGGAGGTCGACAGAAAACACCTACCCACTCTCATAGTACTTCAGCGCCGCCAAGTGCAAATGGCTTTCAAAATTTTAAGAATGTTGCTCCAAATGCAAGGAACGTTCAAACTAAGGTCCAGGTAGGGGCTACTACCCCATTTCAGCCTTCTCTTAGAAAACCAGATACCTTTTGGACTCTTTGCAATCGATGCAAGACACATTACGAGTACCTTAGAGTATATCTAAATCACACTCTCCTTTGTCCTAATTGTCATGAAGCTTTTTTAGCTGTAGAGAAGGCTCCACCCCCAAATGTATTCAAGTCACCTAGTTGGTCTTCTCAGCAGCAGCATCAAAATTCTAGACAGCATCCTGTTAGTGGCAATGTCTATAATACTGGCAGAAATGTTAAAAATCCTGATACTGGGCATTCTGTGGGTGTTAATTCAGTTGATAACACAAACTTCCAGTGGGGTCCTTCTTCCAGGACAACTGGTGTGGGTAGCAACTTTTCGTCAGCTTCCGCGCAAGCTGCAAATTTGGTTCAACAAGCAAGTGAGAAAGTGAAGAGAGATCGTGATGAAACACAGCCATCGATTGAAGTGGAGAGGAGTCATTTGCCCTCTTTAAAAAAGAAAAAAACGGATGGAATTAACAACTATGGGGTCCACGTGGCAAATCAAGTGGCCAGAGGAGATGGATCAGCTGGTGTTGGTTTAACCGAATTAAGGAAGAGTTACCCTGATACTCAAAAGTTACATAGTTTGTATGGTGTATTTAACAGGAACAATAGCCAGAGAGAGTTGTCAATCTTTGAAATTCGGAACATGCTAATGGACAAAGCTCGAGCTGAAATACGTAAGAAACTTAAAGAATGGAGATCATTGGCTGAAAAGTCAACTTTGAATAAACAGTCAAAGAAGAAAAAGAGTGTGGTGAATGATGGGACTCATGATATAAAAATTAATGGTAAATCTTCTGCAAATGGTAAAGGAGGGCATGAGAGGAAGCCTGAGTCAGACTCTTTAGCTGGTAAAAGTACAGACAATGAGAATGATCCTATCTCAATTAATGTTCCGGATCCTGATTTTCATAATTTTGACTTGGACCGAGCCGAAAGTTCATTTGGGGATGATCAAGTTTGGGCTTGTTATGATGATGATGATGGAATGCCTCGTTTCTATGCTCGAATTCACAAGGTGATATCCCTAAGACCATTCAGAATGCGTATCAGTTGGCTCAATTCAAGAAGCAACACTGAGATTGGCCCAATGGACTGGATAGGTTCGGGGTTCACAAAAACCTGTGGGGATTTCAGAATAGGAAGACATGAAGTCACAAGATCATTGAACTCTTTCTCGCATAAGGTTTGCTGGGTAAAAGGTTTACGAGGTGTGATTCGGATATTTCCTCAGAAGGGTGAAGTCTGGGCTCTTTATAGAAACTGGTCTGCGGATTGGAATAAAGGTACTTCAGAAGAAATGATACACAAGTATGATATGGTAGAAGTGCTTAATGATTTTAATGAAGAAGGCGTATCTGTTGCTCCTCTTGTTAAGGTTGCTGGTTTCAGGACAGTATTCCGTACACACATGGACCCAAAAGAAGTGAGGAAGATCCCTAAAGAAGAGATGTTTCGCTTCTCCCATCAGGTTCCCAATTACTTACTTACGGGAGAAGAAGCCCAAAATGCTCCCAAGGGTTGTCGGGAATTGGATCCAGCAGCAACACCTTTGGAGCTCCTCCAGATTGATACAGAATCGAATCGGGCAATGACGAAGGAGACTGAGGTAAAAACTGAAGAAGCAATATCTCATATTAACCAGGAAACTGTAGTTAATCAAGTGGAAGACACTTTGGAAGCTAGGAAGGTAGATGTAGTAACCCAGGAAGATGAACACACTAAGATGTCTGGTGATGTTGCCTTCCAGGGTAGCTAAGGAAGCTGATATGGCAAATGATGCCAACAAAAGTGAATCAACTAGATATGGAGATTGCTCGAGGTATACTCAATAGGTGCATTTTTTGAATTCTGTCTGACCAAAATTGTAGAGAATTTCTTGCTTTTGTTTGGACTGGATCCATGGTTGCTCCAATTGTTTATTGGTTTTGTGGCTTTGTACCTGGGACAGTGGAATCTCTTAAGTCTTATCGAGAAATTCATCGATGATGACAGCCATACTTGGGACAAAAATGAGATCCAACTTTTCTCTACTTACCTGAAATTTTTGAGGGTCTAGTTATATGTGGTTCCTTAGCACTAAATTGACCCAGACCCAGTTCTTAAATGCTTCATTTACGGCCCACGTTTATACTTTTGGTTCATATTCCTTTCTCTTGTAAGGATCCTTTAAAACATGTTTGTTCTCTCTTCCTTATTGAAGTAAGAGCTCCATCAATA 3086 40.73 MECNKDEAARAKEIAERKFTERNYSAAKKFVLKAQNLYPGLDGLSQMMTTLEVYISADNKINGEMDWYGILGVNHLADDETIRRQYRKLALVLHPDKNKSLGAEGAFKLVSEAWSLLSDKAKRLAYNQKRDPKGGRQKTPTHSHSTSAPPSANGFQNFKNVAPNARNVQTKVQVGATTPFQPSLRKPDTFWTLCNRCKTHYEYLRVYLNHTLLCPNCHEAFLAVEKAPPPNVFKSPSWSSQQQHQNSRQHPVSGNVYNTGRNVKNPDTGHSVGVNSVDNTNFQWGPSSRTTGVGSNFSSASAQAANLVQQASEKVKRDRDETQPSIEVERSHLPSLKKKKTDGINNYGVHVANQVARGDGSAGVGLTELRKSYPDTQKLHSLYGVFNRNNSQRELSIFEIRNMLMDKARAEIRKKLKEWRSLAEKSTLNKQSKKKKSVVNDGTHDIKINGKSSANGKGGHERKPESDSLAGKSTDNENDPISINVPDPDFHNFDLDRAESSFGDDQVWACYDDDDGMPRFYARIHKVISLRPFRMRISWLNSRSNTEIGPMDWIGSGFTKTCGDFRIGRHEVTRSLNSFSHKVCWVKGLRGVIRIFPQKGEVWALYRNWSADWNKGTSEEMIHKYDMVEVLNDFNEEGVSVAPLVKVAGFRTVFRTHMDPKEVRKIPKEEMFRFSHQVPNYLLTGEEAQNAPKGCRELDPAATPLELLQIDTESNRAMTKETEVKTEEAISHINQETVVNQVEDTLEARKVDVVTQEDEHTKMSGDVAFQGS 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19082071 19089108 - XM_039018554.1 Bhi12g00624 52436

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00624 772 PANTHER BNAC03G44070D PROTEIN 1 729 - -
Bhi12g00624 772 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 232 274 - -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 425 483 - -
Bhi12g00624 772 SUPERFAMILY Chaperone J-domain 56 126 IPR036869 -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 126 154 - -
Bhi12g00624 772 Pfam Domain of unknown function (DUF3444) 482 687 IPR024593 -
Bhi12g00624 772 CDD DnaJ 66 119 IPR001623 -
Bhi12g00624 772 Gene3D DnaJ domain 63 174 IPR036869 -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 456 472 - -
Bhi12g00624 772 SMART dnaj_3 65 122 IPR001623 -
Bhi12g00624 772 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Bhi12g00624 772 Pfam DnaJ domain 66 127 IPR001623 -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 233 274 - -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 425 442 - -
Bhi12g00624 772 PANTHER HEAT SHOCK PROTEIN-LIKE 1 729 - -
Bhi12g00624 772 MobiDBLite consensus disorder prediction 139 154 - -
Bhi12g00624 772 PRINTS DnaJ domain signature 68 86 IPR001623 -
Bhi12g00624 772 PRINTS DnaJ domain signature 86 101 IPR001623 -
Bhi12g00624 772 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00624 - - - csv:101216332 1366.67
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03678 Bhi-Chr1:93952499 Bhi12g00624 Bhi-Chr12:19082071 0 dispersed
Bhi02g00524 Bhi-Chr2:10028076 Bhi12g00624 Bhi-Chr12:19082071 0 dispersed
Bhi02g00525 Bhi-Chr2:10028076 Bhi12g00624 Bhi-Chr12:19082071 0 dispersed
Bhi05g01465 Bhi-Chr5:50831299 Bhi12g00624 Bhi-Chr12:19082071 3.96E-163 dispersed
Bhi05g01466 Bhi-Chr5:50831299 Bhi12g00624 Bhi-Chr12:19082071 3.96E-163 dispersed
Bhi07g00966 Bhi-Chr7:32048943 Bhi12g00624 Bhi-Chr12:19082071 1.97E-76 dispersed
Bhi12g00624 Bhi-Chr12:19082071 Bhi12g01746 Bhi-Chr12:56761426 5.69E-33 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g875 . . . . . . . . . . . . Car02g00917 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bhi12g00624 . . Lac11g0143 Hepe06g0780 . Lcy12g0122 . . . . . . . . . . Cme09g01971
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003895 2 1 3 3 3 1 2 1 2 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 1 45
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00624 Bhi_Chr12 FPKM 0.282498 0.049803 0.168278 0.071236 0.0 0.029548 0.076706 0.0 0.0 0.0