Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00625 TATTGAGAATAAACCAAGATGAAGTCTCGAGGAAGTTTCGTAGTATAAAGTGGAAGAAGTCTCAATTTTCTTGCTGGATTCAATCAATTTCTCTCTGCCAATAACTTTTTTGTTTATTTGACTTAATACCCAACAATCAATCCTCCGCTAGTTTCTTCTTCCTTTGCCCATCTTCTCATTTCGGAGTTCCCTCAAGAAACTTGTGTCAACTTAAGAATTTGGACTGTATGAGTTTGTAAAGTTGATTTTCCATCTGATATTGCAATTCAGATAATTATCATGACTTATCTGCAGGAGAAGATTGTGAGGTTTCAGGACTGGAGTTCAGATAAAACTTCAAGGGGGCTATATTCTTCAGATAATACTTTAAATGCCGGAAAGATTGGGACAAAAGCTGACTTAGTTACAGAGAAGCCTCACAAAGAATTGGAAACTGGTTCTTACAGGATTAATAGAATTAAGAAATCCTTGAAATCATCTTCTTTCAATAAATTTATGTCCAAAGGTTTTGGAACTGGAAAAAAAGTGCTTGACCCACAGGGACCCTTTCTCCAAAAGTGGAATAAGATATTTGTATTGTCTTGTGTGATTGCAGTCTCGTTGGATCCTTTGTTCTTTTATGTCCCTGTGGTTGATGATGATAAGAAATGTCTTGGGTTGGATGAGAAGATGGAGATTACAGCTAGTGTGTTACGTTCATTCACCGACATATTTTATATATTACATATTGTTTTTCAATTTCGTACGGGATTCATTGCCCCTTCTTCTCGAGTATTTGGAAGAGGTGTTCTTGTTGAAGATGCTTGGGAAATAGCAAAGAAATATCTTTCATCATACTTTTTGATCGACATTCTTGCAGTCCTCCCACTTCCACAAGTAGTGATTCTGATAATTATTCCAAACATGAAAGGCTCAAGGTCGTTGAATACCAAGGACTTGCTGAAATTTGTTGTTTTCTTCCAGTATGTGCCACGGTTTATTAGAATCTATCCATTATATAAAGAAGTTACAAGAACATCTGTACTCACTGAAACTGCATGGGCTGGAGCTGCATTTAATCTCTTTCTCTACATGCTGGCAAGTCATGTTTTTGGAGCATTCTGGTACTTGTTTTCTATAGAACGAGAAACGACATGCTGGCAGAGGGCTTGTCATAATCGTACTGGCTGTGTTTCTAGTTCACTATATTGTGATATCAGTCCAGGAGACAACTCATTTTTAAATATTTCATGTCCTCTAGTTGATGGAGACAACCCTCCTTTTGATTTCGGAATATTTCTTGATGCTCTTAATTCTGGTGTTGTGGGGTCGATGAATTTTCCACAGAAGTTCTTTTACTGTTTCTGGTGGGGTCTGAGAAATCTAAGTTCCCTGGGTCAAAATCTCCAAACAAGCACATACGTGTGGGAAATTTGCTTTGCTGTTTTCATCTCCATTTCTGGCTTAGTTCTGTTTTCATTTCTCATCGGGAACATGCAGACATATTTGCAATCCACCACTACAAGATTGGAAGAAATGAGGGTCAGAAGGAGAGATGCAGAACAATGGATGTCCCACCGTTTGCTCCCTGAAAGCCTCCGGGAGCGAATCAGGAGGTATGAGCAGTACAAGTGGCAGGAAACCAGAGGTGTTGATGAAGAGAATCTGGTTCGAAATCTTCCAAAAGATCTCAGAAGGGATATTAAACGCCATCTCTGCTTGTCTTTGCTAATGAGGGTACCCATATTTGAAAAAATGGATGAACAATTGTTGGATGCCATGTGTGACCGTCTCAAGCCAGTACTATACACAGAGGAAAGCTACATTGTTAGGGAAGGAGACCCGGTAGACGAGATGATTTTCATTATGCGAGGCAAGTTATTGTCTGTAACTACGAATGGGGGAAGAACTGGTTTCTTTAATTCTGAACATCTCAAGGCGGGTGATTTCTGTGGCGAAGAGTTACTGACATGGGCTTTGGATCCACACTCCTCATCCAATCTGCCAATTTCGACGAGAACCGTTCGAACACTTTCAGAAGTTGAAGCATTTGCTTTGAAGGCTGATGACTTGAAGTTCGTAGCCTCACAGTTCCGAAGGCTTCACAGCAAGCAGCTGCGGCACACTTTCAGGTTTTATTCACAGCAGTGGAAGACATGGGCAGCATGTTTTATACAAGCAGCGTGGCGTCGATACCGCAGAAAGAAGCATGAACAGACTCTCTTAGAAGAAGAGAACAGGTTAAAAGACGCATTGGCCAAGACAGGTGGGAGTTCTCCTAGTTTAGGTGCCACCATCTATGCATCCAGATTTGCAGCTAACATCCTTAGAACGATTCGACGGACAAGCTCACGGAAGGCCAGGATTCCAGAGAGAATACCACCAATGTTGCTTCAGAAACCAGCAGAACCTGATTTTACCTCTGAAGAGAATAGTTGATGGAACAAAGGTATTCCTTGTATACAAAAAATGTATGTCTATTCTATGCATTGGTTCTTGTTTCATAATATTGGAAAGAGAATGTTACGGGCATGGTGTTTTGCATGAACATCATTGTATCATTAATAGCTTTGATTGATGGCAAAATACTTCAACCTGAGGTCAATTAGGCAGTATCCAAGCAATGGTCATTGCCTAAACAATAAGTTTTTCTGGATCATTGATGGATGCCTATCTGCCGATCTCGTGCTGGTGAGTTCGTTATGAGTTTGTAGAACAAGATTTGTGAATATGTGTAAAATGTTTCATGTCTTGTAGGTCATTGTTGTTAGTATAAAGAAGCATTTTTCTTTTAGAAGATA 2780 39.86 MTYLQEKIVRFQDWSSDKTSRGLYSSDNTLNAGKIGTKADLVTEKPHKELETGSYRINRIKKSLKSSSFNKFMSKGFGTGKKVLDPQGPFLQKWNKIFVLSCVIAVSLDPLFFYVPVVDDDKKCLGLDEKMEITASVLRSFTDIFYILHIVFQFRTGFIAPSSRVFGRGVLVEDAWEIAKKYLSSYFLIDILAVLPLPQVVILIIIPNMKGSRSLNTKDLLKFVVFFQYVPRFIRIYPLYKEVTRTSVLTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETTCWQRACHNRTGCVSSSLYCDISPGDNSFLNISCPLVDGDNPPFDFGIFLDALNSGVVGSMNFPQKFFYCFWWGLRNLSSLGQNLQTSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRVPIFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMIFIMRGKLLSVTTNGGRTGFFNSEHLKAGDFCGEELLTWALDPHSSSNLPISTRTVRTLSEVEAFALKADDLKFVASQFRRLHSKQLRHTFRFYSQQWKTWAACFIQAAWRRYRRKKHEQTLLEEENRLKDALAKTGGSSPSLGATIYASRFAANILRTIRRTSSRKARIPERIPPMLLQKPAEPDFTSEENS 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19116777 19123946 + XM_039051232.1 Bhi12g00625 52437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00625 712 SUPERFAMILY cAMP-binding domain-like 411 604 IPR018490 -
Bhi12g00625 712 ProSiteProfiles cAMP/cGMP binding motif profile. 482 566 IPR000595 -
Bhi12g00625 712 Gene3D Jelly Rolls 480 600 IPR014710 -
Bhi12g00625 712 SUPERFAMILY Voltage-gated potassium channels 85 404 - -
Bhi12g00625 712 Coils Coil 634 654 - -
Bhi12g00625 712 Gene3D - 96 406 - -
Bhi12g00625 712 CDD CAP_ED 482 613 IPR000595 -
Bhi12g00625 712 Gene3D Helix hairpin bin 408 473 - -
Bhi12g00625 712 SMART cnmp_10 482 613 IPR000595 -
Bhi12g00625 712 Pfam Cyclic nucleotide-binding domain 502 593 IPR000595 -
Bhi12g00625 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 709 - -
Bhi12g00625 712 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 6 709 - -
Bhi12g00625 712 Pfam Ion transport protein 94 409 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g00469 Bhi-Chr1:8481014 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi01g00470 Bhi-Chr1:8493865 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi01g01467 Bhi-Chr1:30016659 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi01g01468 Bhi-Chr1:30016659 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi01g01470 Bhi-Chr1:30137227 Bhi12g00625 Bhi-Chr12:19116777 2.17E-109 dispersed
Bhi11g03047 Bhi-Chr11:82817683 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi11g03048 Bhi-Chr11:82817683 Bhi12g00625 Bhi-Chr12:19116777 0 dispersed
Bhi12g00625 Bhi-Chr12:19116777 Bhi12g00626 Bhi-Chr12:19116975 0 tandem
Bhi01g02574 Bhi-Chr1:63232429 Bhi12g00625 Bhi-Chr12:19116777 3.75E-125 transposed
Bhi03g01696 Bhi-Chr3:35644759 Bhi12g00625 Bhi-Chr12:19116777 0 transposed
Bhi06g00360 Bhi-Chr6:7880339 Bhi12g00625 Bhi-Chr12:19116777 1.89E-129 transposed
Bhi06g01405 Bhi-Chr6:42551630 Bhi12g00625 Bhi-Chr12:19116777 0 transposed
Bhi10g00533 Bhi-Chr10:11868789 Bhi12g00625 Bhi-Chr12:19116777 0 transposed
Bhi01g01464 Bhi-Chr1:29960353 Bhi12g00625 Bhi-Chr12:19116777 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00625 K05391 - csv:101221781 1357.81