Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00634 CTCATTCACTCCCATTATTCCCTCCTCAACCCCATGCACACTCATCTCATTATTCTCCTTCAACAACAACAACAACCATGATCAACAACAACTACAACAAGCTCCACTCCTCCCTCTCCGCCACCTCTACTCCGGCATCCTCCTTCCACCTCTCCGGCAATGATCTCCCGCCCACACCTCCACCCTCCTCCTCCCACCGCCGTCGCTCTCGTATCCTTATCATCTCCTTCCTCTCCGTCCTCCTCATCGCTGCCTCCATCGTCTCTGCCGCCGTCCTAGTCCGGTCCCGCATCGCGTCTAACGAACCCCATTTCCCACACAACAAGCCCTCCCAAGCCATCTCCCGCGCGTGTAGCCACACTCTCTACCCATCTCTCTGCCTCTCATCTCTTCTCTCCATCCCCGACGCGCTCTCCGCCGACGTTCATGACCTTGTTCATATCTCTCTCAACTTAACTCTTCAACATCTCACTAAGGCTCTTTATTCCACTTCTCAAATCCCTATCTCACAAATCTCTAACGACCCTTTAGCTCATTCAGCTTATGAAGACTGTATGGAGCTTCTAAATGACGCCGTTGACGCTTTTTCAGTTTCTCTTTTTTCTACTGAAGCTTCCAATCACGACGTCATGACGTGGCTTAGTGCGGCATTGACTTACCATGACACGTGTACGGATGGATTTGCGGATGTGGCTGACTTGGCTGTTAAGAATCAGGTGGAGGCGAAGTTGAGTGATTTGTCGGAGATGATCAGTAATTCTTTGGCTATATTTTCTGGGTTTGGTGGTGGGGATTTGCCAGTGCAGAATAGGCGGCGTCGGTTGATGGAGAGTGGTACGCGGTCATGGGCGGCGGAGAATGGTGGTGATGGGGGTTTTCCTCAATGGCTGAGTGTGAAGGATCGGCGGCTTTTGGCTGCTCCTATATCGGCGATTCAGGCGGATATTGTGGTGGCTAAGGATGGTTCTGGGAAGTTCAAGACGGTGGCTGAGGCCATTGACGCGGCGCCGTCGTCGAGTGGCCGCCGGATCGTCATCTACATTAAGGCCGGAAAGTACGAAGAGGAGAATTTGAAGGTGGGAAGGAAGAAAACAAACTTGATGTTTGTGGGAGATGGGAAGGGCATAACCGTCATTTCAGGTGGCAAAAGTGTTTTTGACAAAGTTACCACTTTTCGCACCGCCACCTTTGCGGGGTCCGGAACAGGAATAATTCTACGAGACATGATATTTGAGAACACAGCAGGACCAAGCAAGCACCAAGCGGTGGCATTACGCTTGAGCGCAGACCACGCCGTGGTATACCGATGCAACATCATTGGTTATCAAGACACTCTCTACGTGCACTCGAATCGCCAATTCTTCCGAGAGTGCGACATCTATGGTACAGTCGACTTCATCTTTGGGAACGCTGTAGTCGTTTTCCAAAGCTGCAACATCTATGCTCGAAAGCCAATGCCGGGACAAAAAAACACCATTACAGCCCAAGACAGGAAGGACCCAAACCAAAATACCGGAATCTCCATCCATGCTTGCAAGATAATTGCCACCAGCGACCTTCAAGCCTCCAAGGGTTCTTTCCCCACCTTCCTCGGCCGCCCTTGGAAGCTATACTCTAGAGTTGTGTACATGGTATCTTTCATGGGAGACCATATTCACCCACGAGGCTGGCTGGAGTGGCAAGGTTCTTTTGCTCTCGACACTCTTTACTATGGCGAGTATTCAAATTCTGGGCCCGGCGCTGCCGTGGGACAGCGGGTTAAGTGGTCCGGTTATCGAGTTATAACTTCCACGGTGGAAGCCTCTAAATTTACTGTTGGCCAATTTATTTATGGCTCTTCTTGGTTGCCCTCCACTGGAGTGTCATTTTCAGCTGGCTTATCTGCTAACTAATTAGAATGCATAATTTTTTTTTTTCATGAGTGTATTTAAATAATTAAAATTTGTTTTTTTCTTTTTTTTTTTTTATTTTTTATTTTTAGGATGTGGTTGATGATGACACGTGTATAGTCTCATTCCTTTGATTATGCTCTTGGAAAATAATATGAGCCACATCAAAATATGAGATGGTCATATATATAAATACATATATACATATATGGCTATAATTGTGATTGTATTTGTTGTATCAACATTATATATTTACTGAATAAATTTGTTTTTTTTCTCTC 2170 47.14 MINNNYNKLHSSLSATSTPASSFHLSGNDLPPTPPPSSSHRRRSRILIISFLSVLLIAASIVSAAVLVRSRIASNEPHFPHNKPSQAISRACSHTLYPSLCLSSLLSIPDALSADVHDLVHISLNLTLQHLTKALYSTSQIPISQISNDPLAHSAYEDCMELLNDAVDAFSVSLFSTEASNHDVMTWLSAALTYHDTCTDGFADVADLAVKNQVEAKLSDLSEMISNSLAIFSGFGGGDLPVQNRRRRLMESGTRSWAAENGGDGGFPQWLSVKDRRLLAAPISAIQADIVVAKDGSGKFKTVAEAIDAAPSSSGRRIVIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSVFDKVTTFRTATFAGSGTGIILRDMIFENTAGPSKHQAVALRLSADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAVVVFQSCNIYARKPMPGQKNTITAQDRKDPNQNTGISIHACKIIATSDLQASKGSFPTFLGRPWKLYSRVVYMVSFMGDHIHPRGWLEWQGSFALDTLYYGEYSNSGPGAAVGQRVKWSGYRVITSTVEASKFTVGQFIYGSSWLPSTGVSFSAGLSAN 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19483377 19488944 + XM_039018913.1 Bhi12g00634 52446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00634 604 SUPERFAMILY Pectin lyase-like 284 600 IPR011050 -
Bhi12g00634 604 CDD PMEI-like_3 91 237 - -
Bhi12g00634 604 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 233 IPR006501 GO:0004857
Bhi12g00634 604 Pfam Pectinesterase 289 586 IPR000070 GO:0030599|GO:0042545
Bhi12g00634 604 Pfam Plant invertase/pectin methylesterase inhibitor 87 231 IPR006501 GO:0004857
Bhi12g00634 604 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 235 IPR035513 -
Bhi12g00634 604 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Bhi12g00634 604 Gene3D - 283 601 IPR012334 -
Bhi12g00634 604 PANTHER PECTINESTERASE 39 601 - -
Bhi12g00634 604 PANTHER PECTINESTERASE 39 601 - -
Bhi12g00634 604 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 86 233 IPR035513 -
Bhi12g00634 604 SMART PMEI_2 83 231 IPR006501 GO:0004857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g01483 Bhi12g00634 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01024 Bhi-Chr8:33487966 Bhi12g00634 Bhi-Chr12:19483377 2.94E-137 dispersed
Bhi09g00921 Bhi-Chr9:20518623 Bhi12g00634 Bhi-Chr12:19483377 2.80E-170 dispersed
Bhi12g00634 Bhi-Chr12:19483377 Bhi12g00925 Bhi-Chr12:27823274 2.80E-148 dispersed
Bhi03g00560 Bhi-Chr3:10923138 Bhi12g00634 Bhi-Chr12:19483377 5.93E-152 transposed
Bhi11g00345 Bhi-Chr11:7984426 Bhi12g00634 Bhi-Chr12:19483377 8.37E-150 transposed
Bhi11g00682 Bhi-Chr11:16994903 Bhi12g00634 Bhi-Chr12:19483377 1.85E-134 transposed
Bhi01g01483 Bhi-Chr1:30543865 Bhi12g00634 Bhi-Chr12:19483377 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00634 - - csv:101216816 1021.54