Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00647 TTTGGAATATAATAAAGCTTGACAACGCTGTAATGGTACGTTATGGTATGGTAGTTGTTCTAAATTCTAATGTGATCCCTACGATTCCAACAATAAACCCATTTTCCTCTCTGCTTCCTTTCGGTCTCCGCCCATTTCTCCCTCTCAAATCCTCTCTTCTTTTCCACGTTCTGGATGTTAGAGGAGGGATGGCTGCAGCAGAAGCAAAGCCTCCACGAAAGCATTCTGAAAACAACTTCCCTGCCAAAGACGATGACTACAGAGATTCAAAACTATTGTCAACTCCATCGTTTTCCTCAAATTCAGAACGCAGTGCTGCATCTGATCACAGAGCACATGGGTTTAATTATCCAACCAAAGCTGCTCATATCCCAAAATCTTATCAAACAGTTGACTGTGAGTTGAAGTCAGATAAGCCACCTGATTTTCAGCACCATAAGGGTTTTGCAGTAGGATGGGCAAAAACTGTGCAGGCTGGACTGGATAATTCAAGTGTCCGGATTGCAAGTAAAACAACTGTATCTAGTGAGGAACATCAAAACATAGAAGAACTTGAACATCGAGTTTGCAAGGGTTATCCCACTGAGAGTAACAATGAATCTGTAAACATGACTAAGAAAACAGACTGCATGGATGAGTTCCACTACATTGAGGATCATTTTACAGACTTGCACAATTTTGACAGTCCGATCTCAAAGCAAGGAGAGAAAGTCTCTTTTGATCTGGAGTCGCATTGGACAAGAATTGAGAAAACTAAGCCATGGTGGCGTTCTGCTAGTAAAGATGAGTTGGCTTCCTTGGTTGCCCGGAAGTCTCTTGAAAACTTGGAAAATTGTGACCTTCCTCAACCACGAACCAAACACCAAAGCAAGGATGAATCTACCTGTCCTGAGTGTTTTGGTCAAGATTGCTTTCTCACTTCACCGTTTACTGAGATGCAATTCTCCAGTTTGGATGGATATAACAGGGGAATGCACCCTTCAGGTGGCATGGATGAGAGACAGTTCGTTGTTGGTAGTGTAGGTCACTTGCTGCGTCATCAAGATCATTTCAGCGTTAGCAGAACTGGTAATGAAGAATACGACTCAAGTAGTATTGCAAATCTGAATTCTAGCAAAGCACAATTGTTGGAAGCGCTATGCCATTCACAGACTCGAGCAAGGGAGGCTGAGAAAGCCGCACAAGAAGCAGATACAGAGAAGAAACACATTGTCTCACTCTTTCTCAGACAAGCCACCCAACTTTTTGCTTATAAGCAGTGGTTCCAGTTGCTGCAGTTACAGAACCTTTGCCTTCAACTTAGGAACAAAGATCACTTCTCAGACGTCTTGCCTTGGGTCCCTTGTAAAGACAGGCAGTTCAATCAACCTAGAAACAGAAGGAAGAAAAGGGATCGAGACCATCATAAATTTACAATGTACGACATTGCTTTCGCTGTGGGATTGGGTCTTGCTGGTGCCACTTTGCTCATCGGATGGACAACGGGTTGGTTGGTTCCCATGTTTTGAGTTTCTTGACATCTCGAACTAGCAGGTTCGTTCTCTGGTTCACTTTGGATTCCCTGGTCAAGGCAAGGATACTATCATCTTCCACATCACAAAATCGAACTTTTGTAAATATGTAGAGCCTTTGTATATGTTTTATACTTGACCAACTCTTGGTCAAACTGTAAATAGTATACAAAACTACATAGTAAATATATGGCCGACTTCATGTCAAAATGGTGTTTATCACAGGTTTTGTATTTGAGTTATTGTCTTCTTCAAATTCTCGTGTCTGGGAAGTTGAACATTTCCCATCTTGCTCAATGGAGAGAATTTGAGCAGTTTGTGATTGAAAGGCAGTAACATACTTTCTTATTTCAGCTGTCTAGTCTACTTTCAAACTGCTTTGCTTTTCTCCACTTGGTATCCACTAAGTGAAAGACATCTTTCCTACTTTTCTTCACTTTATATATATATATATATAAGACATTTGCTTAATAAA 1986 41.14 MVRYGMVVVLNSNVIPTIPTINPFSSLLPFGLRPFLPLKSSLLFHVLDVRGGMAAAEAKPPRKHSENNFPAKDDDYRDSKLLSTPSFSSNSERSAASDHRAHGFNYPTKAAHIPKSYQTVDCELKSDKPPDFQHHKGFAVGWAKTVQAGLDNSSVRIASKTTVSSEEHQNIEELEHRVCKGYPTESNNESVNMTKKTDCMDEFHYIEDHFTDLHNFDSPISKQGEKVSFDLESHWTRIEKTKPWWRSASKDELASLVARKSLENLENCDLPQPRTKHQSKDESTCPECFGQDCFLTSPFTEMQFSSLDGYNRGMHPSGGMDERQFVVGSVGHLLRHQDHFSVSRTGNEEYDSSSIANLNSSKAQLLEALCHSQTRAREAEKAAQEADTEKKHIVSLFLRQATQLFAYKQWFQLLQLQNLCLQLRNKDHFSDVLPWVPCKDRQFNQPRNRRKKRDRDHHKFTMYDIAFAVGLGLAGATLLIGWTTGWLVPMF 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19651856 19655457 - XM_039019701.1 Bhi12g00647 52459

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00647 491 MobiDBLite consensus disorder prediction 57 80 - -
Bhi12g00647 491 PANTHER PROTEIN, PUTATIVE-RELATED 53 491 - -
Bhi12g00647 491 PANTHER EXPRESSED PROTEIN 53 491 - -
Bhi12g00647 491 MobiDBLite consensus disorder prediction 55 99 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00647 - - - bhj:120068032 953.355
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00646 Bhi-Chr12:19651856 Bhi12g00647 Bhi-Chr12:19651856 0 tandem
Bhi12g00647 Bhi-Chr12:19651856 Bhi12g00648 Bhi-Chr12:19651856 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g1028 . . . . . . . . . . . . Car02g00932 . . Cpe05g00596 . . . . . . . . . . . . . . . . . . . . Csa05g00045 . . . . . . . . . . . Cmo02g01151 . . . . . . . Bhi12g00647 . . Lac11g0163 . . Lcy12g0139 . . . . . . . . . . Cme09g01989
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002285 1 4 2 1 1 2 3 2 2 1 1 1 1 2 2 3 2 2 3 1 2 2 1 2 2 1 2 6 6 2 63
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00647 Bhi_Chr12 FPKM 16.828829 22.60663 15.565811 18.762224 3.402959 0.0 5.353445 59.773659 54.149544 53.183666