Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00701 CGCTGACGTGTCATGAGTGGGCCTGATTGGACTCTCTTTCAGATATTTTCCTCAATCCTGCCTTCCTTTCTTCTCAGCCCTCCGATTTCTGGCGGTTAAATCCCCACTCCTCCTCTCCGCCCTTGGATCCCCCACACTCAATTTGCAGCTGATATTTTTTTAGATATTTTTTTTTCTGCGTTTTCTTTTCCTTTGCATGATGAGATTTTCAGCCACCGTTTTCTTCTTCTTCTTCATTCACACCATTCTCCCTTTCCTACTCCTTCTCCTTCTTCTTCGTTTCTGATTACGCCTTCGACTGACATAGAGAGGACTGCTACTAAATGGGCGAGGCCGTGGTCGTCAGCTCTGAGGATGTGGATGTCGATTATATCAGGCTCCACAACGACGATATGGCGGACGCAGAGAGTATGGGCACTCACAGACCTAACAGAGATGGAAGTTCAAGTGGGTTTGGGATCGGGATTAAGTGGGAGCGCTTCTTGCCCAAGATGAGGCTCAGGGTTTTGCTCGTCGAAGCCGACGATTCCACCAGACAGATTATCACTGCCCTTCTCCGCAAGTGCTGCTACCGAGTTGCTGCTGTTCCTGATGGCTTGAAAGCATGGGAGATTCTCAAAGAAAGGCCCTGTAATGTAGATCTTATATTGGCGGAAGTTGAATTGCCATCAATCTCTGGATTTGCTCTGCTAACTCTGATCATGGAGCACGAGACTTGCAAAAATATTCCTGTTATAATGATGTCCTCCGAAGATTCTATCAGCACTGTTTATAAATGCATGATGAAAGGTGCAGCAGACTATCTTGTCAAGCCCTTAAGGAGGAATGAGCTGAGAAATCTGTGGCAACATGTTTGGAGAAGACAAACATCATCCAATGTGAGAACTGACGTTCAAGAAAAGGTTGAAGTCACTTCAGAAAATGAGACTGCAAGCAATCACTCAACTGGTTATGTTGCTGGAGTTCAGAGGAATAATAAAAACATTGAGAAAGGAAGTGATACTCAGAGCTCTTGTACGAAGGTAGATTTCGAGGCTGGAAGTAAGATGCAGGAAAATTCACAGCGTAGGCAGGGAAGAGCCTCTCCCAACGACTTCAAGCTACAAAAAGATGAACATCACATCAATTTGAGTCAAAGATTGTTTATGCATGAAAATGAAACTGGAGGATTGGCAATGAGTTGCTATGTCAATGCTGATTTACCAATCACACTAAGCATGGGTCTTGAGCCGGTCAATGATGGGAGAAGTCCTAATATTGCTAGTGAAGCAGGTGATGATAAGGATTTGCTTGCCAACCCATCCAGAGATGCAACTGCCTTGAATCATGCCTGTATCAAGTATCCCGATAACTACCAAAAAGGACGGGCTACCCTCAAACATTCTAGTGCTTCAGCTTTTACAAGATACACTTTCAGGCCATTGCAATCACTTCAAGCAAAATCAAGTAGTATCTGTGATGAGCAAAAGGAATTTGGAAGCAACCCCGAGCATATTGGAAGTATTACTGCTACTTCTACCTCTGATGCCATTAATCCTACGCCAAATCTTCAAAAGAGTAATACTTCTATGCCTATGATCACGAGTCAATCTACTCAGTCTGAAGTTGCTAAATCAAGCACTTCGGAGACGGTAATCCCTCTACAAGTGTCAGTGAAAGATTTGATGTCTAATAATCAATGCTCAGCCTCGGGCTATGGCTCTTTACCTTCTCACAACTTCTGCACGCAACGGGGTAGCCCATCGTCTCCATGCCAAACTCCAGTCACCCATCCCGAACTCATCTTTGGAAAACAGACGGTTTATCCCTTAAACCTTGAGAATCATAATTTGGAGCAATTTCTGAACCAGCACCACAACGTAAGCAGTCCAGCAAGCAGAAAGATAGAAAACTCGGGCCAGTCCGCAGAAAATCAAGGCCATATATCTCCTACCACTGATCACAGTGCAAACAGTAATGTATGTGGTGGTAATACAACTCATATTGGAAGCGTTGGATATCCTAGCACCTGCGGAAGCAACAGCAATGTAGATCGGGTTGGCGCTGCAAGGGTTACATCTGAGAGCAGAAATGAAGAAGCTTTGTTTTGTGGAGGAGATTCTCACCGGTCCAGTCAAAGAGAAGCAGCTCTAACAAAGTTCCGACTGAAAAGAAAAGATAGATGTTATGAGAAAAAGGTCCGTTATGAGAGTAGAAAAAAGCTGGCAGAGCAGCGTCCAAGAGTGAAGGGACAGTTTGTCCGTAGAGTAGTTACTGTTCCATTGCCTGCAGAAACCAATGACAATACATCCAACGGTTAGCAGTTGGAAATAGGAGCGCCTGTAAAGCCCTTGAATAAGCGTTAAACCTTATCGCTGCCTTTCCCCCACCACTTAATAATACTCATAGAAACCGATAAAACAAGAGTGTTTGCTTTGGAAACCACAGGAACAGGAAGCATAAGCTGCCTTCTTCCCTTTCATATTCATTTTATTTGCCTCTACTTCCCAGGTTTCTCTCTATCTTTTGTATAAGAGCTTTGTAATCTTTAGAAATTTCATGAGATTCTTTATATTTAACATGTAGATACACATTTTCATTCCAACATCTGTATATTAATATTATTTTTTTCCCATTTTGGTCTATTAA 2628 43.19 MGEAVVVSSEDVDVDYIRLHNDDMADAESMGTHRPNRDGSSSGFGIGIKWERFLPKMRLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPCNVDLILAEVELPSISGFALLTLIMEHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVWRRQTSSNVRTDVQEKVEVTSENETASNHSTGYVAGVQRNNKNIEKGSDTQSSCTKVDFEAGSKMQENSQRRQGRASPNDFKLQKDEHHINLSQRLFMHENETGGLAMSCYVNADLPITLSMGLEPVNDGRSPNIASEAGDDKDLLANPSRDATALNHACIKYPDNYQKGRATLKHSSASAFTRYTFRPLQSLQAKSSSICDEQKEFGSNPEHIGSITATSTSDAINPTPNLQKSNTSMPMITSQSTQSEVAKSSTSETVIPLQVSVKDLMSNNQCSASGYGSLPSHNFCTQRGSPSSPCQTPVTHPELIFGKQTVYPLNLENHNLEQFLNQHHNVSSPASRKIENSGQSAENQGHISPTTDHSANSNVCGGNTTHIGSVGYPSTCGSNSNVDRVGAARVTSESRNEEALFCGGDSHRSSQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRVVTVPLPAETNDNTSNG 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 20438051 20443227 + XM_039018866.1 Bhi12g00701 52513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00701 658 ProSiteProfiles Response regulatory domain profile. 60 178 IPR001789 GO:0000160
Bhi12g00701 658 SUPERFAMILY CheY-like 59 185 IPR011006 -
Bhi12g00701 658 MobiDBLite consensus disorder prediction 239 254 - -
Bhi12g00701 658 Pfam Response regulator receiver domain 61 172 IPR001789 GO:0000160
Bhi12g00701 658 SMART REC_2 59 174 IPR001789 GO:0000160
Bhi12g00701 658 MobiDBLite consensus disorder prediction 196 231 - -
Bhi12g00701 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 43 346 - -
Bhi12g00701 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 345 633 - -
Bhi12g00701 658 MobiDBLite consensus disorder prediction 512 547 - -
Bhi12g00701 658 CDD psREC_PRR 61 164 - -
Bhi12g00701 658 MobiDBLite consensus disorder prediction 239 258 - -
Bhi12g00701 658 Pfam CCT motif 599 641 IPR010402 GO:0005515
Bhi12g00701 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 346 IPR045279 GO:0009736
Bhi12g00701 658 PANTHER TWO-COMPONENT RESPONSE REGULATOR 345 633 IPR045279 GO:0009736
Bhi12g00701 658 MobiDBLite consensus disorder prediction 394 416 - -
Bhi12g00701 658 Gene3D - 57 264 - -
Bhi12g00701 658 ProSiteProfiles CCT domain profile. 599 641 IPR010402 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01655 Bhi-Chr3:34712179 Bhi12g00701 Bhi-Chr12:20438051 3.12E-18 dispersed
Bhi03g01656 Bhi-Chr3:34712179 Bhi12g00701 Bhi-Chr12:20438051 3.12E-18 dispersed
Bhi08g01139 Bhi-Chr8:36015238 Bhi12g00701 Bhi-Chr12:20438051 3.82E-15 dispersed
Bhi12g00701 Bhi-Chr12:20438051 Bhi12g00702 Bhi-Chr12:20438060 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2602 PF00072 Response_reg 7.70E-21 CL0304 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00701 K12130 - csv:101209788 1169.45