Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00702 GTCATGAGTGGGCCTGATTGGACTCTCTTTCAGATATTTTCCTCAATCCTGCCTTCCTTTCTTCTCAGCCCTCCGATTTCTGGCGGTTAAATCCCCACTCCTCCTCTCCGCCCTTGGATCCCCCACACTCAATTTGCAGCTGATATTTTTTTAGATATTTTTTTTTCTGCGTTTTCTTTTCCTTTGCATGATGAGATTTTCAGCCACCGTTTTCTTCTTCTTCTTCATTCACACCATTCTCCCTTTCCTACTCCTTCTCCTTCTTCTTCGTTTCTGATTACGCCTTCGACTGACATAGAGAGGACTGCTACTAAATGGGCGAGGCCGTGGTCGTCAGCTCTGAGGATGTGGATGTCGATTATATCAGGCTCCACAACGACGATATGGCGGACGCAGAGAGTATGGGCACTCACAGACCTAACAGAGATGGAAGTTCAAGTGGGTTTGGGATCGGGATTAAGTGGGAGCGCTTCTTGCCCAAGATGAGGCTCAGGGTTTTGCTCGTCGAAGCCGACGATTCCACCAGACAGATTATCACTGCCCTTCTCCGCAAGTGCTGCTACCGAGTTGCTGCTGTTCCTGATGGCTTGAAAGCATGGGAGATTCTCAAAGAAAGGCCCTGTAATGTAGATCTTATATTGGCGGAAGTTGAATTGCCATCAATCTCTGGATTTGCTCTGCTAACTCTGATCATGGAGCACGAGACTTGCAAAAATATTCCTGTTATAATGATGTCCTCCGAAGATTCTATCAGCACTGTTTATAAATGCATGATGAAAGGTGCAGCAGACTATCTTGTCAAGCCCTTAAGGAGGAATGAGCTGAGAAATCTGTGGCAACATGTTTGGAGAAGACAAACATCATCCAATGTGAGAACTGACGTTCAAGAAAAGGTTGAAGTCACTTCAGAAAATGAGACTGCAAGCAATCACTCAACTGGTTATGTTGCTGGAGTTCAGAGGAATAATAAAAACATTGAGAAAGGAAGTGATACTCAGAGCTCTTGTACGAAGGTAGATTTCGAGGCTGGAAGTAAGATGCAGGAAAATTCACAGCGTAGGCAGGGAAGAGCCTCTCCCAACGACTTCAAGCTACAAAAAGATGAACATCACATCAATTTGAGTCAAAGATTGTTTATGCATGAAAATGAAACTGGAGGATTGGCAATGAGTTGCTATGTCAATGCTGATTTACCAATCACACTAAGCATGGGTCTTGAGCCGGTCAATGATGGGAGAAGTCCTAATATTGCTAGTGAAGCAGGTGATGATAAGGATTTGCTTGCCAACCCATCCAGAGATGCAACTGCCTTGAATCATGCCTGTATCAAGTATCCCGATAACTACCAAAAAGGTTCTCCATCCAACAATTTTGCCGCAAACAATTTTGGCTCTGCTCTTCACTTGGATCTTTCCCTGAGAAGATGTCAACCTAACGATTTTGAGGAACGTGCTGCAGGACGGGCTACCCTCAAACATTCTAGTGCTTCAGCTTTTACAAGATACACTTTCAGGCCATTGCAATCACTTCAAGCAAAATCAAGTAGTATCTGTGATGAGCAAAAGGAATTTGGAAGCAACCCCGAGCATATTGGAAGTATTACTGCTACTTCTACCTCTGATGCCATTAATCCTACGCCAAATCTTCAAAAGAGTAATACTTCTATGCCTATGATCACGAGTCAATCTACTCAGTCTGAAGTTGCTAAATCAAGCACTTCGGAGACGGTAATCCCTCTACAAGTGTCAGTGAAAGATTTGATGTCTAATAATCAATGCTCAGCCTCGGGCTATGGCTCTTTACCTTCTCACAACTTCTGCACGCAACGGGGTAGCCCATCGTCTCCATGCCAAACTCCAGTCACCCATCCCGAACTCATCTTTGGAAAACAGACGGTTTATCCCTTAAACCTTGAGAATCATAATTTGGAGCAATTTCTGAACCAGCACCACAACGTAAGCAGTCCAGCAAGCAGAAAGATAGAAAACTCGGGCCAGTCCGCAGAAAATCAAGGCCATATATCTCCTACCACTGATCACAGTGCAAACAGTAATGTATGTGGTGGTAATACAACTCATATTGGAAGCGTTGGATATCCTAGCACCTGCGGAAGCAACAGCAATGTAGATCGGGTTGGCGCTGCAAGGGTTACATCTGAGAGCAGAAATGAAGAAGCTTTGTTTTGTGGAGGAGATTCTCACCGGTCCAGTCAAAGAGAAGCAGCTCTAACAAAGTTCCGACTGAAAAGAAAAGATAGATGTTATGAGAAAAAGGTCCGTTATGAGAGTAGAAAAAAGCTGGCAGAGCAGCGTCCAAGAGTGAAGGGACAGTTTGTCCGTAGAGTAGTTACTGTTCCATTGCCTGCAGAAACCAATGACAATACATCCAACGGTTAGCAGTTGGAAATAGGAGCGCCTGTAAAGCCCTTGAATAAGCGTTAAACCTTATCGCTGCCTTTCCCCCACCACTTAATAATACTCATAGAAACCGATAAAACAAGAGTGTTTGCTTTGGAAACCACAGGAACAGGAAGCATAAGCTGCCTTCTTCCCTTTCATATTCATTTTATTTGCCTCTACTTCCCAGGTTTCTCTCTATCTTTTGTATAAGAGCTTTGTAATCTTTAGAAATTTCATGAGATTCTTTATATTTAACATGTAGATACACATTTTCATTCCAACATCTGTATATTAATATTATTTTTTTCCCATTTTGGTCTATTAA 2724 43.17 MGEAVVVSSEDVDVDYIRLHNDDMADAESMGTHRPNRDGSSSGFGIGIKWERFLPKMRLRVLLVEADDSTRQIITALLRKCCYRVAAVPDGLKAWEILKERPCNVDLILAEVELPSISGFALLTLIMEHETCKNIPVIMMSSEDSISTVYKCMMKGAADYLVKPLRRNELRNLWQHVWRRQTSSNVRTDVQEKVEVTSENETASNHSTGYVAGVQRNNKNIEKGSDTQSSCTKVDFEAGSKMQENSQRRQGRASPNDFKLQKDEHHINLSQRLFMHENETGGLAMSCYVNADLPITLSMGLEPVNDGRSPNIASEAGDDKDLLANPSRDATALNHACIKYPDNYQKGSPSNNFAANNFGSALHLDLSLRRCQPNDFEERAAGRATLKHSSASAFTRYTFRPLQSLQAKSSSICDEQKEFGSNPEHIGSITATSTSDAINPTPNLQKSNTSMPMITSQSTQSEVAKSSTSETVIPLQVSVKDLMSNNQCSASGYGSLPSHNFCTQRGSPSSPCQTPVTHPELIFGKQTVYPLNLENHNLEQFLNQHHNVSSPASRKIENSGQSAENQGHISPTTDHSANSNVCGGNTTHIGSVGYPSTCGSNSNVDRVGAARVTSESRNEEALFCGGDSHRSSQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRRVVTVPLPAETNDNTSNG 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 20438060 20443227 + XM_039018864.1 Bhi12g00702 52514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00702 693 ProSiteProfiles Response regulatory domain profile. 60 178 IPR001789 GO:0000160
Bhi12g00702 693 MobiDBLite consensus disorder prediction 239 254 - -
Bhi12g00702 693 SMART REC_2 59 174 IPR001789 GO:0000160
Bhi12g00702 693 Pfam Response regulator receiver domain 61 172 IPR001789 GO:0000160
Bhi12g00702 693 PANTHER TWO-COMPONENT RESPONSE REGULATOR 43 668 IPR045279 GO:0009736
Bhi12g00702 693 ProSiteProfiles CCT domain profile. 634 676 IPR010402 GO:0005515
Bhi12g00702 693 CDD psREC_PRR 61 164 - -
Bhi12g00702 693 Pfam CCT motif 634 676 IPR010402 GO:0005515
Bhi12g00702 693 MobiDBLite consensus disorder prediction 239 258 - -
Bhi12g00702 693 MobiDBLite consensus disorder prediction 195 231 - -
Bhi12g00702 693 MobiDBLite consensus disorder prediction 547 582 - -
Bhi12g00702 693 Gene3D - 57 264 - -
Bhi12g00702 693 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR5 43 668 - -
Bhi12g00702 693 SUPERFAMILY CheY-like 59 185 IPR011006 -
Bhi12g00702 693 MobiDBLite consensus disorder prediction 429 451 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00702 Bhi-Chr12:20438060 Bhi03g01648 Bhi-Chr3:34712179 3.54E-18 dispersed
Bhi12g00701 Bhi-Chr12:20438051 Bhi12g00702 Bhi-Chr12:20438060 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2603 PF00072 Response_reg 8.30E-21 CL0304 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00702 K12130 - csv:101209788 1249.57