Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00749 CTAACAACGAACAAAACAAAAATTCACTGACATGGCCAACTCCATGCTTTCTTCCTCCTAGCTCAGGCCAATGCCTATCAGTTTTAAATCTCCACCAGAAAACCCAATATTCAGCTTCTCTATCTCTTTCAGCAACCTCTATTTTCTTCCATGTCTTCTTCTCCAATTCTCTCTCTCCCTTTCACTCTTAAGCCTTCTCACTTCCCCAACCACACTCCCAAACTTCCCAATTTCTCTCTCTCCCTGCTTCGTCCATCAATTTCCTTCGCGCCATTTTCGACTCTACCAGCTCTCAAGGCCTTTAATGGTCAGATCAAGAGCAAGACTAGTAGCAGTTCTACTTTCGCCTATGTCACGGGCCCTGCGTCGGACCCTAATGTCAGCGAGTCCGATCCCAAGGTGGACGACGCCTCCGATTCCCAGGTTCGGGTTGTTGGGGTCTTAAATTGGGACCTATTCTTGAGGCTTTTGACCAAGCATAAGCTACGGCTTCTGGTCTCTTTGCTTACTCTTCTTTGCTGCACTACTTGTACTCTCTCAATGCCCTTTTTCTCTGGTAGATTTTTTGAGGTAATTATAGGTGCAAAACCTGGATCTCTGTGGAGGCTTCTAAGTACAGTTGGAATTCTATATGCATTGGAGCCAATATTGACGGTTTTATTTGTCACCAACATGAATTTCATGTGGGAGAAGGTTATGTCAAGATTAAGAGCCCAGATTTTTGGAAGGTTGCTGATTCAGAAGGTGGAATTCTTTGACAGATACAAGGTCGGTGAAATTACCGGATTGTTAACTTCTGATTTGGGATCTCTTAAGGATGTGGTGAGTGAGAATGTCTCAAGGGATCGTGGATTCAGAGCATTCTCAGAGGTGATTGGAACAATATGTATATTATTTACATTGTCCCCTCAGCTGGCACCTATTCTTGGCCTGCTGATGCTCACGGTATCTGTTTCAGTGGCGGTATACAAGCGATCAACTATTCCTGTATTTAAAGCTCATGGGTTAGCCCAAGCATCCATGGCTGATTGTGCGACTGAGACGTTCTCTGCAATTCGTACGGTGAGATCCTTTGGTGGTGAAAAGCGTCAAATGTTCAATTTTGGCCGCCAGGTTATTGCATATGAAAGCAGTGGCATATCACTTGGGACTTTTAAATCTCTGAATGAATCCTTGACTAGAGTTGCTGTTTATGTTTCGCTTATGACATTGTATTGGCTTGGAGGAGACAAAGTGAAAGCGGGTGAACTTTCTGTTGGAACCATGGCTTCTTTTATTGGATATACTTTCACGTTAACATTTGCTGTTCAAGGATTAGTAAATTCATTTGGAGATCTCCGTCGAACTTTTGCTGCTGTTGAAAGAATTAATTCTGTTTTAAATGAAGAGGTTGATGAAGCCCTTGCACATGGGTTAGAAAAAGAGATGCAACATAAAGAATTTAGATATAAGTTGTTATTCTCCAGCGATACTGATGAAAATAGTCAAGTGAAAACACAGTACATGACAGCCCTACAATCTTCTAGCAACGTTATCAATCTTGCTTGGTCTGGTGATATTTGTCTTGAAGATGTGTGCTTTTCTTATCCTTTGAGACCTGACGTTGACATTCTTAGCGGTTTGAATTTAACCCTTAAATGTGGAACCGTAACGGCACTAGTGGGCCCTAGTGGAGCAGGAAAGAGTACGATAGTGCAGCTGTTGGCACGTTTTTATGAGCCAAAGCAAGGGCAGATAAAAGTTTCTGGTGAAGATATTCGAGCATTTGATAAGAGCGAATGGGCTCGAGCTGTTTCAATAGTGAATCAAGAACCCGTTCTTTTTTCGGTGTCGGTCGGAGAGAATATTGCATATGGACTTCCAGATGATAATGTAACAAAGGATGAAGTTATAAAGGCAGCCAAAGCAGCAAACGCTCATGACTTCATTATTTCACTTCCTCAGGGCTATGACACACCAGTCGGTGAACGCGGAGGCCTTCTTAGCGGTGGCCAGCGACAGAGAATTGCAATTGCAAGAGCTTTGCTTAAGAATGCTCCAATCCTTATACTTGATGAGGCGACCAGTGCACTAGATGCAGTTAGTGAGCGACTGGTCCAGGACGCGCTAAACCATCTAATGAAGGGAAGGACAACATTGGTGATCGCACATCGATTGAGTACAGTTCAAAATGCTCATCAAATTGCATTTTGTTCTGATGGAAAAATTGTAGAGCTGGGAACTCATTTGGAACTACTGGCTCAGAAAGGTCGGTATGCTTCATTAGTTAGCACACAAAGGCTGGCATTTGAGTGAATTTCCTCCGCCATTTTACTGCATCCCCTACTTCAGAGGCTCGCATTAAAAGTTCAAAATAACCATTGAAAAAGAAACATCCCAGTACAAAGTAGATGTAAACTATTGTATGTAGCATACTTGCTGCTATAATGTCATTGAGAAGTTTGAGCAGAGTTATGTATTTTTCCATATTTTCACAAGGAACCTTAAATGTCATTGAATATTCAAAGGAGTAAAGGTACAGAATCTTCCTACAATGAATTTTGGTTGAGAATAATACTTCTATATAATAAGTGAAGCTTGGAAACTTTTACCAA 2594 41.9 MSSSPILSLPFTLKPSHFPNHTPKLPNFSLSLLRPSISFAPFSTLPALKAFNGQIKSKTSSSSTFAYVTGPASDPNVSESDPKVDDASDSQVRVVGVLNWDLFLRLLTKHKLRLLVSLLTLLCCTTCTLSMPFFSGRFFEVIIGAKPGSLWRLLSTVGILYALEPILTVLFVTNMNFMWEKVMSRLRAQIFGRLLIQKVEFFDRYKVGEITGLLTSDLGSLKDVVSENVSRDRGFRAFSEVIGTICILFTLSPQLAPILGLLMLTVSVSVAVYKRSTIPVFKAHGLAQASMADCATETFSAIRTVRSFGGEKRQMFNFGRQVIAYESSGISLGTFKSLNESLTRVAVYVSLMTLYWLGGDKVKAGELSVGTMASFIGYTFTLTFAVQGLVNSFGDLRRTFAAVERINSVLNEEVDEALAHGLEKEMQHKEFRYKLLFSSDTDENSQVKTQYMTALQSSSNVINLAWSGDICLEDVCFSYPLRPDVDILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPKQGQIKVSGEDIRAFDKSEWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKAAKAANAHDFIISLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIAFCSDGKIVELGTHLELLAQKGRYASLVSTQRLAFE 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 21955498 21973822 + XM_039018731.1 Bhi12g00749 52561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00749 714 Pfam ABC transporter 488 639 IPR003439 GO:0005524
Bhi12g00749 714 Gene3D - 468 711 IPR027417 -
Bhi12g00749 714 Pfam ABC transporter transmembrane region 115 385 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi12g00749 714 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 58 712 IPR039421 -
Bhi12g00749 714 Gene3D ABC transporter type 1, transmembrane domain 99 416 IPR036640 GO:0005524|GO:0016021
Bhi12g00749 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 461 709 IPR027417 -
Bhi12g00749 714 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 58 712 - -
Bhi12g00749 714 SMART AAA_5 497 691 IPR003593 -
Bhi12g00749 714 ProSitePatterns ABC transporters family signature. 611 625 IPR017871 GO:0005524
Bhi12g00749 714 SUPERFAMILY ABC transporter transmembrane region 103 415 IPR036640 GO:0005524|GO:0016021
Bhi12g00749 714 CDD ABC_MTABC3_MDL1_MDL2 470 709 - -
Bhi12g00749 714 CDD ABC_6TM_TAP_ABCB8_10_like 130 406 - -
Bhi12g00749 714 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 470 708 IPR003439 GO:0005524
Bhi12g00749 714 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 115 398 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00749 Bhi-Chr12:21955498 Bhi08g01071 Bhi-Chr8:34841381 1.68E-102 dispersed
Bhi12g00749 Bhi-Chr12:21955498 Bhi12g00750 Bhi-Chr12:21955917 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00749 K05657 - csv:101211598 1248.8