Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00750 CCAGGTTCGGGTTGTTGGGGTCTTAAATTGGGACCTATTCTTGAGGCTTTTGACCAAGCATAAGCTACGGCTTCTGGTCTCTTTGCTTACTCTTCTTTGCTGCACTACTTGTACTCTCTCAATGCCCTTTTTCTCTGATTTTTTGAGGTAATTATAGGTGCAAAACCTGGATCTCTGTGGAGGCTTCTAAGTACAGTTGGAATTCTATATGCATTGGAGCCAATATTGACGGTTTTATTTGTCACCAACATGAATTTCATGTGGGAGAAGGTTATGTCAAGATTAAGAGCCCAGATTTTTGGAAGGTTGCTGATTCAGAAGGTGGAATTCTTTGACAGATACAAGGTCGGTGAAATTACCGGATTGTTAACTTCTGATTTGGGATCTCTTAAGGATGTGGTGAGTGAGAATGTCTCAAGGGATCGTGGATTCAGAGCATTCTCAGAGGTGATTGGAACAATATGTATATTATTTACATTGTCCCCTCAGCTGGCACCTATTCTTGGCCTGCTGATGCTCACGGTATCTGTTTCAGTGGCGGTATACAAGCGATCAACTATTCCTGTATTTAAAGCTCATGGGTTAGCCCAAGCATCCATGGCTGATTGTGCGACTGAGACGTTCTCTGCAATTCGTACGGTGAGATCCTTTGGTGGTGAAAAGCGTCAAATGTTCAATTTTGGCCGCCAGGTTATTGCATATGAAAGCAGTGGCATATCACTTGGGACTTTTAAATCTCTGAATGAATCCTTGACTAGAGTTGCTGTTTATGTTTCGCTTATGACATTGTATTGGCTTGGAGGAGACAAAGTGAAAGCGGGTGAACTTTCTGTTGGAACCATGGCTTCTTTTATTGGATATACTTTCACGTTAACATTTGCTGTTCAAGGATTAGTAAATTCATTTGGAGATCTCCGTCGAACTTTTGCTGCTGTTGAAAGAATTAATTCTGTTTTAAATGAAGAGGTTGATGAAGCCCTTGCACATGGGTTAGAAAAAGAGATGCAACATAAAGAATTTAGATATAAGTTGTTATTCTCCAGCGATACTGATGAAAATAGTCAAGTGAAAACACAGTACATGACAGCCCTACAATCTTCTAGCAACGTTATCAATCTTGCTTGGTCTGGTGATATTTGTCTTGAAGATGTGTGCTTTTCTTATCCTTTGAGACCTGACGTTGACATTCTTAGCGGTTTGAATTTAACCCTTAAATGTGGAACCGTAACGGCACTAGTGGGCCCTAGTGGAGCAGGAAAGAGTACGATAGTGCAGCTGTTGGCACGTTTTTATGAGCCAAAGCAAGGGCAGATAAAAGTTTCTGGTGAAGATATTCGAGCATTTGATAAGAGCGAATGGGCTCGAGCTGTTTCAATAGTGAATCAAGAACCCGTTCTTTTTTCGGTGTCGGTCGGAGAGAATATTGCATATGGACTTCCAGATGATAATGTAACAAAGGATGAAGTTATAAAGGCAGCCAAAGCAGCAAACGCTCATGACTTCATTATTTCACTTCCTCAGGGCTATGACACACCAGTCGGTGAACGCGGAGGCCTTCTTAGCGGTGGCCAGCGACAGAGAATTGCAATTGCAAGAGCTTTGCTTAAGAATGCTCCAATCCTTATACTTGATGAGGCGACCAGTGCACTAGATGCAGTTAGTGAGCGACTGGTCCAGGACGCGCTAAACCATCTAATGAAGGGAAGGACAACATTGGTGATCGCACATCGATTGAGTACAGTTCAAAATGCTCATCAAATTGCATTTTGTTCTGATGGAAAAATTGTAGAGCTGGGAACTCATTTGGAACTACTGGCTCAGAAAGGTCGGTATGCTTCATTAGTTAGCACACAAAGGCTGGCATTTGAGTGAATTTCCTCCGCCATTTTACTGCATCCCCTACTTCAGAGGCTCGCATTAAAAGTTCAAAATAACCATTGAAAAAGAAACATCCCAGTACAAAGTAGATGTAAACTATTGTATGTAGCATACTTGCTGCTATAATGTCATTGAGAAGTTTGAGCAGAGTTATGTATTTTTCCATATTTTCACAAGGAACCTTAAATGTCATTGAATATTCAAAGGAGTAAAGGTACAGAATCTTCCTACAATGAATTTTGGTTGAGAATAATACTTCTATATAATAAGTGAAGCTTGGAAACTTTTACCAA 2171 40.86 MNFMWEKVMSRLRAQIFGRLLIQKVEFFDRYKVGEITGLLTSDLGSLKDVVSENVSRDRGFRAFSEVIGTICILFTLSPQLAPILGLLMLTVSVSVAVYKRSTIPVFKAHGLAQASMADCATETFSAIRTVRSFGGEKRQMFNFGRQVIAYESSGISLGTFKSLNESLTRVAVYVSLMTLYWLGGDKVKAGELSVGTMASFIGYTFTLTFAVQGLVNSFGDLRRTFAAVERINSVLNEEVDEALAHGLEKEMQHKEFRYKLLFSSDTDENSQVKTQYMTALQSSSNVINLAWSGDICLEDVCFSYPLRPDVDILSGLNLTLKCGTVTALVGPSGAGKSTIVQLLARFYEPKQGQIKVSGEDIRAFDKSEWARAVSIVNQEPVLFSVSVGENIAYGLPDDNVTKDEVIKAAKAANAHDFIISLPQGYDTPVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIAFCSDGKIVELGTHLELLAQKGRYASLVSTQRLAFE 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 21955917 21973822 + XM_039018732.1 Bhi12g00750 52562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00750 540 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 224 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi12g00750 540 Gene3D ABC transporter type 1, transmembrane domain 1 271 IPR036640 GO:0005524|GO:0016021
Bhi12g00750 540 PANTHER ABC TRANSPORTER B FAMILY MEMBER 28 1 538 - -
Bhi12g00750 540 ProSitePatterns ABC transporters family signature. 437 451 IPR017871 GO:0005524
Bhi12g00750 540 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 538 IPR039421 -
Bhi12g00750 540 Pfam ABC transporter 314 465 IPR003439 GO:0005524
Bhi12g00750 540 CDD ABC_MTABC3_MDL1_MDL2 296 535 - -
Bhi12g00750 540 SMART AAA_5 323 517 IPR003593 -
Bhi12g00750 540 Pfam ABC transporter transmembrane region 2 211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bhi12g00750 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 287 535 IPR027417 -
Bhi12g00750 540 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 296 534 IPR003439 GO:0005524
Bhi12g00750 540 Gene3D - 294 537 IPR027417 -
Bhi12g00750 540 SUPERFAMILY ABC transporter transmembrane region 2 241 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00750 Bhi-Chr12:21955917 Bhi07g01185 Bhi-Chr7:36861209 4.09E-71 dispersed
Bhi12g00749 Bhi-Chr12:21955498 Bhi12g00750 Bhi-Chr12:21955917 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00750 K05657 - csv:101211598 996.497