Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00764 CTTTTTAATTGAGGAAATGGGAAAAGAGGGAGAAAAAGTTGCAGGGTTGGCTTTTAATGGTGAAGGGGTTGGATTGAAGGCAATGAAATGCCATAAGGAAGTCAAAAGAAGCTTAGCAAAGTAAGCCTTTTTTGCCTATTTTGGTCTTTGTAAATTGGGAAGGGAAAATTTTTAACGTCCACCATTACAGGACAGCCCATGCTATATATAGCTCTCTTAACTCATAACCTGTCAACACCCTCCGACCAGCGTCGTCTCCGGATTCACAATCCAATATTTTCTCTGTTTTTCTTTCAAAAAAACCCAAAAAATAAAAAATAAAAAAATAAAAAAATCCCACCAACACATTCCCTTGATTCCCTCTTTCTTTTTCCTTCTTTCTGCAAATACCCTTCTGAATCCCCACGATTCTTCCCCTTTCAAGGGATATTCAACCCAGATTTTTTGCTGCTTCTTTCAATGGATCATCATCAGGTAGCAAATAGATGGTGGGTTTGTTGTTGTTTTTGGGTTTGAAGGTGATTCAGGATCGGATTTGTAGTTATGGAACAGAAGCACATTTTTCTATCTGCTTTGGGTGTTGGGGTTGGAGTTGGGGTAGGCCTTGGATTGAGCTCTGGACAAGCTGTTGGGAAATGGGTTGGAGGGAATGGCTCTTCTGATGAGATTACAGGGCAAAAGATTGAACAGGAGCTGATCAGGCAGCTGCTTGATGGCAAAAACAGCAATGTAACTTTTGATGAGTTTCCTTATTATCTAAGCGAGAGGACGCGGGTGCTTTTGATGAGTGCTGCATATGTTCATTTGAAGCACTGCGACATCTCCAAGCACACTAGAAATCTTTCACCAGCAAGTCGGGCTATTTTGCTTTCAGGACCAACAGAACTTTACCAGCAGATGCTTGCCAAGGCTCTGGCGCATCACTTCGAGTCGAAGTTGCTGTTGTTAGACGTTTCTGACTTTTCTTTAAAGATGCAGAGCAAATATGGTTGTCCCAAGAAAGAATCTTCATTCAAGAGGTCGATCTCTGAGGTGACATTTGAGCGAATGTCTAGCATTTGGGGTTCTTTCACGATTCTTCCTTCAAGTGGAAATACTAGGGGAAACCTAAGAAGGCAAAGCAGTACTACCGACATTCAATCAAGATGCACTGATGGCTCGTCTAATCTTCCAAAACTTCGGAGAAATGCATCTGCTGCGTCTGACATCAGTAGTATTTCATCAAACTATGCTTCAACAAACCCAGCTTCTGCCAAGCGCACAAATAGTTGGTGTTTTGATGAGAAACTTTTTCTTCAGTCACTTTATAAGGTCTTGGTGTCGGTATCAGAAACTAGTTCCATAATTTTGTATCTGAGAGATGTTGAGAGACTTCTCCTTCAGTCACAGAGGATGTACAATCTGTTCCATAAATTTCTGAACAAGCTCTCAGGATCAGTTTTAGTACTTGGTTCTCGAATGGTAGATGTGGAAAATGATTGCGGCGACGTTGACGACAGACTGACCGATTTATTCCGGTATAGTGTTGAAATTCGACCCCCTGAAGATGAGAACCATCTTGTCAGCTGGAAAGCTCAATTGGAAGAGGACATGAAGATGATTCAGTTCCAAGATAATAAAAACCACATCGCTGAAGTACTTGCTGCAAATGATCTTGAATGTGATGATCTTGGTTCAATCTGCCATGCAGACACCATGATTCTCAGTAATTATATTGAAGAAATTGTCGTGTCGGCGATATCCTATCATTTGATGAACAACGGGGATCCAGAATACCGAAATGGAAAACTTCTGATATCTTCCAAGAGTTTATCCCATGGGTTGAGTATATTCCAGGAAGGAAATAATGAAGGAAAAGACACTCTAAAGCTTGAAACGAATGCAGAATCATCGAAGGAAGCCCAGAGGGACGAAGCTGTTGGGGCAAAGACTGAATCTAAATCCGAAAATCCAGCTGCAGAACACAGAAGTGAGGCAGAGAAATCTGTTCCTATAGTGAAAAAAGATGTTGAAAATGTGCCTCCACAAAAAGCACCTGAAATTCCTCCCGACAACGAATTTGAAAAGCGTATAAGACCCGAAGTTATCCCTGCAAATGAAATTGGGGTGACATTTGTGGACATTGGTGCTATGGATGATATCAAAGAGTCCTTACAGGAATTAGTCATGCTTCCTCTTCGACGACCAGACCTCTTTAAAGGTGGGCTTCTTAAACCTTGCAGGGGCATCCTGCTTTTTGGTCCTCCTGGAACGGGAAAGACAATGCTGGCAAAGGCCATCGCTAATGAAGCCGGAGCAAGTTTCATCAATGTTTCAATGTCCACAATCACTTCTAAATGGTTTGGGGAAGATGAAAAGAATGTCCGTGCATTGTTTACGCTCGCAGCAAAAGTCTCACCTACAATTATTTTTGTCGATGAAGTCGATAGCATGCTCGGCCAGAGGACTAGAGTCGGAGAGCACGAGGCCATGCGGAAGATTAAAAATGAATTCATGTCACACTGGGATGGACTGCTGACTAGGAATGATGAACGAATCCTAGTTCTTGCTGCGACCAACAGGCCATTTGATCTCGATGAAGCAATCATTCGGCGATTTGAACGCAGAATTATGGTCGGTCTTCCATCAGTGGAGAGCAGGGAATTGATATTAAGAACTCTTCTATCGAAGGAGAAGGCTGAAGATCTTGATTTCAAGGAGCTTGCAACTATGACAGAAGGATACAGTGGAAGTGATCTCAAGAATTTGTGTGTGACTGCAGCTTATCGGCCTGTTCGGGAGCTCTTGCAACAAGAGAGATTGAAGGATTTGGAAAAGAAGAAGAGAGAGACAAAGGAAAAGGAGAAGCAGAAGCAGAAGGAGGAGGGGGAGGGGGAGGGGGAGGAGAAGGAGAAGCAGGAGGAGAAGGAGAAGGAAAAGGAGAAGGAGAAGGAGACCGAGACCGAGAACGAGAAGAAGGAAAAGGAAAATAATTCAGAAGAAGTCACAGGTACGAAAGAGGCAGAAAAAGAGGAACAGGCGATCATTCTGAGGCCCCTAAATATGGATGATATGAGGCAGGCCAAAAATCAGGTTGCTGCAAGTTTTGCTTCTGAGGGATCAGTTATGAATGAGTTGAAGCAATGGAATGATTTGTATGGTGAGGGAGGTTCAAGAAAAAAGCAACAACTTACATACTTCTTATAGAAGGTAGAACCAAGTGTCTTATCTTAAACACGTAAGAGCCAGCGGTTATATGAACGTCCATAGAAAGACGAGATGCTTGTTGGGTGCAAGTCATGAGATCTGGAGAACTCTTCTAGCGTTGAAGATTGATTCTTGCAATGAGTCAACCTATGTGGGGCAAGTTCATCGCCAATTGCGGTATCGTTCCAATGGTATCTGTCATTTGTTTCGAGTCATATGGTTAAGGAATGGGTAATGAATGAATTCTTGGGCCAATGTTCAAACCGTTTACCTCGTATCATTGAAAGATTTTAATTACAATGTTTTCGAGTACATGGGGTTGGGAGGTGTATTATGAAAATGTGGAGCAGATAGTCAGATTTGTTTGATATATTTTGGACCATGGGGAACATACCATAGGATTTGTACATCATTTATGTGTAATTTTTATGCATTCAAACTATAAAGGTTGTAGAGTTTGTATCATAAATTACTTGAGCTGTCTTTTAGAGATATTCTTTATGCA 3691 41.91 MEQKHIFLSALGVGVGVGVGLGLSSGQAVGKWVGGNGSSDEITGQKIEQELIRQLLDGKNSNVTFDEFPYYLSERTRVLLMSAAYVHLKHCDISKHTRNLSPASRAILLSGPTELYQQMLAKALAHHFESKLLLLDVSDFSLKMQSKYGCPKKESSFKRSISEVTFERMSSIWGSFTILPSSGNTRGNLRRQSSTTDIQSRCTDGSSNLPKLRRNASAASDISSISSNYASTNPASAKRTNSWCFDEKLFLQSLYKVLVSVSETSSIILYLRDVERLLLQSQRMYNLFHKFLNKLSGSVLVLGSRMVDVENDCGDVDDRLTDLFRYSVEIRPPEDENHLVSWKAQLEEDMKMIQFQDNKNHIAEVLAANDLECDDLGSICHADTMILSNYIEEIVVSAISYHLMNNGDPEYRNGKLLISSKSLSHGLSIFQEGNNEGKDTLKLETNAESSKEAQRDEAVGAKTESKSENPAAEHRSEAEKSVPIVKKDVENVPPQKAPEIPPDNEFEKRIRPEVIPANEIGVTFVDIGAMDDIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTRNDERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVESRELILRTLLSKEKAEDLDFKELATMTEGYSGSDLKNLCVTAAYRPVRELLQQERLKDLEKKKRETKEKEKQKQKEEGEGEGEEKEKQEEKEKEKEKEKETETENEKKEKENNSEEVTGTKEAEKEEQAIILRPLNMDDMRQAKNQVAASFASEGSVMNELKQWNDLYGEGGSRKKQQLTYFL 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22964723 22972342 + XM_039018520.1 Bhi12g00764 52576

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00764 880 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Bhi12g00764 880 MobiDBLite consensus disorder prediction 184 214 - -
Bhi12g00764 880 Coils Coil 746 824 - -
Bhi12g00764 880 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
Bhi12g00764 880 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 880 - -
Bhi12g00764 880 Gene3D - 694 768 - -
Bhi12g00764 880 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 880 - -
Bhi12g00764 880 Pfam AAA+ lid domain 714 757 IPR041569 -
Bhi12g00764 880 MobiDBLite consensus disorder prediction 447 482 - -
Bhi12g00764 880 CDD AAA 560 693 - -
Bhi12g00764 880 MobiDBLite consensus disorder prediction 759 828 - -
Bhi12g00764 880 Gene3D - 521 693 IPR027417 -
Bhi12g00764 880 SMART AAA_5 558 695 IPR003593 -
Bhi12g00764 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 761 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00764 - - - csv:101216426 1513.82
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02301 Bhi-Chr1:56259532 Bhi12g00764 Bhi-Chr12:22964723 4.42E-22 dispersed
Bhi12g00764 Bhi-Chr12:22964723 Bhi09g00866 Bhi-Chr9:19240521 2.14E-14 dispersed
Bhi12g00764 Bhi-Chr12:22964723 Bhi12g00765 Bhi-Chr12:22964723 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g810 . Blo15g00108 . . . . . . . . . Cma15g01059 . Car15g00982 . Cpe05g00632 . . . . . . . . Cla01g00082 Cam01g0082 Cec01g0083 Cco01g0083 Clacu01g0082 Cmu01g0084 Cre09g2425 . . . Cone15ag0049 . Csa05g00095 Chy09g01399 . . . . . . . . . . . Cmo15g01117 . . . . . Cpe13g00283 Bhi12g00764 . . . . . Lcy12g0068 . . . . . . . Lsi09g00068 . . Cme09g01945
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001190 2 3 2 2 2 2 2 2 2 2 2 2 3 2 2 3 2 5 4 2 3 2 2 2 2 2 2 5 3 4 75
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00764 Bhi_Chr12 FPKM 5.964784 4.113531 21.36689 19.304522 17.667437 17.19515 19.506422 10.174109 9.53969 11.96684