Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00800 TGCATCAATTTAACAGCCTGTATCCTCATCCTCCTCCATCCCAAATTCCGTGTTCCAATTCCTTCTTATAAATAAACCCCTAAAACCCTTTCTCTCTGTCCCACAAAACCTTAAAAAAAACTTATATATACACACACACAAAACCAACACTCGTAACTAACTCCCCACATATATGGATTTTTCCGATGAACTTTCTACATCCTGCCACCGTACCAATCACTCCGACGAGGAGCTTCTTTTGGCGTCCCGATACCCGAAGAAAAGAGCCGGTAGAAAGAAGTTTAAGGAAACTCGTCACCCTATCTACCGTGGTGTGCGACGGCGTAACTCCGGCAAGTGGGTCTGTGAAGTCAGAGAGCCCAATAAGAAGACTAGGATTTGGCTTGGAACTTTCCCCACTGCTGACATGGCTGCTCGCGCTCACGATGTCGCCGCCATCGCCCTCCGTGGGCGCTCCGCTTGTCTTAATTTTGCTGATTCTGCCTCCACTCTTCCCATTCCGGCTACTGTCGATCCCAAGGACATTCAGAGGGCTGCAGCCCAGGCTGCAGAGGCCTTCCGCCCGCCGGAGGATGAATCGAGGACCGCCGCTGCCGGCGCGACGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAAGGGATGTTTTATTTGGACGAGGAAGCGGTGTTTGGGATGCCGGGGTTGTTGGCGGACATGGCGGAGGCAATGCTGTTGCCGCCGCCGAATTGTGTGGGGAACGACAATGACGACTATGGGGCTAATTCTATGGATTTCGATGCCGACATGTCGTTATGGAGTTACTCGATTTGATACTCCTTAATTAAATTGACGTGTAAAGTAGGGGCATTATCGGGTTTTTTATTCCCTTGGTGCCAAGTCAAGCGCCTAAGGATAAAAGGGGGGAGGAAAAAATTTTAAAAAAATAATTTCTTCCAATCTCCGTATGCTTTTATATCTTTTTATAAAAGTACGGCCGTTTTAAAAAATTATATAAAAAAAAAGTAAAACAAAAGGGTAAAATATTCTCTTTTGGAAAGATAGATAAATAAATAAATACATATAAACTTTGTGTCTGTACATTATGGTATAACAAGGGAGTCATTTGATTGAGAGAATTTTGTGAGTAA 1125 45.87 MDFSDELSTSCHRTNHSDEELLLASRYPKKRAGRKKFKETRHPIYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTADMAARAHDVAAIALRGRSACLNFADSASTLPIPATVDPKDIQRAAAQAAEAFRPPEDESRTAAAGATAAAEEEEEEEGMFYLDEEAVFGMPGLLADMAEAMLLPPPNCVGNDNDDYGANSMDFDADMSLWSYSI 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 24081018 24082142 + XM_039051169.1 Bhi12g00800 52612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00800 211 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Bhi12g00800 211 CDD AP2 43 103 IPR001471 GO:0003700|GO:0006355
Bhi12g00800 211 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Bhi12g00800 211 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
Bhi12g00800 211 SUPERFAMILY DNA-binding domain 44 103 IPR016177 GO:0003677
Bhi12g00800 211 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 211 IPR045277 GO:0003700
Bhi12g00800 211 MobiDBLite consensus disorder prediction 127 153 - -
Bhi12g00800 211 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Bhi12g00800 211 PRINTS Ethylene responsive element binding protein signature 67 83 IPR001471 GO:0003700|GO:0006355
Bhi12g00800 211 Pfam AP2 domain 43 93 IPR001471 GO:0003700|GO:0006355
Bhi12g00800 211 PANTHER AP2/ERF DOMAIN-CONTAINING TRANSCRIPTION FACTOR 7 211 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g01369 Bhi12g00800 CCT
Bhi01g01369 Bhi12g00800 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01369 Bhi-Chr1:27531347 Bhi12g00800 Bhi-Chr12:24081018 1.22E-85 dispersed
Bhi11g01968 Bhi-Chr11:56332683 Bhi12g00800 Bhi-Chr12:24081018 9.57E-45 dispersed
Bhi12g00203 Bhi-Chr12:5877801 Bhi12g00800 Bhi-Chr12:24081018 4.55E-41 dispersed
Bhi12g00800 Bhi-Chr12:24081018 Bhi12g00202 Bhi-Chr12:5831949 1.32E-66 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2607 PF00847 AP2 2.10E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00800 - - csv:101207745 323.553