Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00881 AATAGAATCAACAACATTAATTGCATTTCCAGTACATCTCCTAATGGCCACGCAGTTTCAAGTGCTCTTCAACAATTCAACTGAGGATCTGTTGAATTCACCTACAAAAGTTGGTTATTCATATTCAACTCCTACTCACCAGGGAAGTTGTTGGAGACGGTCAGCGGCGTGCTTTAGCGCTGCAACTTCTTGACCTGGTACGTGACTTTGTTCTGATGTCAGGGAGGTCCATTGCTGGCGCCGGAGATGTCATGAAGAAAGACTGCACCGATCTCATTCGTCGGATTGCTCTCCTGATTCATCTGGCGGAGGAGATCACAAACTTTTGTAGTGGCAGCGGGGAGAATTTTGAGGCATTGAATGATGATGGGTCTTCTTCATCATCTTCTTCGTTGGATTGCCTTTCGGAAGTGGTCGGAGCAATTCAGGCAGCAAAGCGGCTTCTGTACATGGCTTTGACTTTCTCTGTATACGACGAGGAAGGTTGTGGTGCGACTTCGACGGAGGAAGCTACCAAAAAATTGGTTCTACAATTTCAATACGTGACAACAAGATTGGAAACTGCACTTTCAAATCTGCCGTACGACCACTTTTGTGTCTCAGACGAAGTACAAGAACAGGTTGATTTGGTTAGAGCTCAATTGAGGAGAGCATCAAACAAGTATGAATCTATGTCTAACCCTGCAGAAAAGAAGCTTCAAACTCGAGGTTCTGTAAAATGGATGATCAATAATGATGTCAAGAGTATTTCTAGTGTTGATGATGGAGATGTAGAGTCTCAGCATCATCCTCGGAACTGCAATTATCCGACTAGTTTCGATTCGGTGAATTCTTGTTTTGATGAGAGTTCAAGTGTTGTTCATTCTGATATGGAAGATGTTCTAGCCAGCAAGAGCCAAGATGAGGTTAGGAAGCCTATTGAAGTTGACATTCCTGAAAACTTCTTGTGCCCCATTTCCTTTGAGTTGATGTTGGATCCCGTCATCTGCTCGACCGGACAGACATATGAAAGATCCAACGTACAAAATTGGATAGACAGAGGAAATAGAACATGTCCAAAAACTCAGGAGCAGCTCCAAACTCTGATCCTCACTCCAAATTTTCTAATGAGAAAACTGATAGCTGAATGGTGTGAAGAGCACAATGTGAAGCTAGAGGAAGGATTAACCAGCAGGAAATTTAAGAAGTATAGATCCTTCGAAGACGACTGCCGAAGGACTCTGCCGATAAAAACTCTCGTTCGACACCTTTCATTCGGGTCAATTCAGGAGCAGAAAATAGCTGTAACCGAGATTCGAAAACTATCGAAAAGCAGCTCAGATCATAGAGTTGAAATAGCAGAAGCAGGAGCAATCCCACAGCTGGTTAACCTTTTAACTTCAGAAGATATTGTAACACAAGAGAATGCAATGTCTTGCATTCTCAACCTTTCACTTCATGAGCAAAACAAGAGACTTGTTATGCTTTCTGGTGCTGTTTCTTACATTTCCAAAGTCCTCAAAGTTGGGAGCATGGAAGGGAGAGAGTGTGCTGCTGCGACGATTTACAGCTTGTCGTTAGCCGATGAGAACAAGGCAATAATCGGGGCTTCAGGTGTGATACCGGACCTGTTAGAAATTCTCGAGATCGGTAGCCCGAGAGGGCAGAAAGATGCTGCAGGAGCTCTATTGAATTTGTGTATGTACCAAGGGAACAAGGGCAGGGCTTTGAAGGCTGGGATTGTCAGACCATTGTTGAAAATACTCTCTGATCCAAATGGATCTTTGGTTGATGATGCTCTCTATATAATGTCAGTTCTTTGCGGCCACCCAGAAGCGAAAGCTGCAATGGCGAATGCGAATACGCTGCTCGTATTGACCGATGTTCTGAAGATGGGATCCTCTCGCAGCAAGGAAAATGCAGCTGCAGTTCTGCTTGCATTGTGCAAGGGAGATTGGGAGAAGCTGGAATGGTTAACTAGGCTTGGCGCAATGGCGTCGTTGATGAAACTTGCGGAGAACGGCACGGGGAGAGCGAGGCGGAAGGCTGCTTCATTGTTGGAACAACTCAGAAAGTCATGAACAAGATTCAAATCAGTTTCTGCTGTGCTCTGAGAGCCTCAGTTCTTCTATGGCCTTCTTTTTCTTTTTGACATTTACATAAAAAACAATGTGAATAGTTTTATTTTTCTTTTGAGTTTATCATATTCAAGTCTGTTTTTGCTAGTTTATGCATTTTTTTTGTCTCAA 2228 43.49 MSGRSIAGAGDVMKKDCTDLIRRIALLIHLAEEITNFCSGSGENFEALNDDGSSSSSSSLDCLSEVVGAIQAAKRLLYMALTFSVYDEEGCGATSTEEATKKLVLQFQYVTTRLETALSNLPYDHFCVSDEVQEQVDLVRAQLRRASNKYESMSNPAEKKLQTRGSVKWMINNDVKSISSVDDGDVESQHHPRNCNYPTSFDSVNSCFDESSSVVHSDMEDVLASKSQDEVRKPIEVDIPENFLCPISFELMLDPVICSTGQTYERSNVQNWIDRGNRTCPKTQEQLQTLILTPNFLMRKLIAEWCEEHNVKLEEGLTSRKFKKYRSFEDDCRRTLPIKTLVRHLSFGSIQEQKIAVTEIRKLSKSSSDHRVEIAEAGAIPQLVNLLTSEDIVTQENAMSCILNLSLHEQNKRLVMLSGAVSYISKVLKVGSMEGRECAAATIYSLSLADENKAIIGASGVIPDLLEILEIGSPRGQKDAAGALLNLCMYQGNKGRALKAGIVRPLLKILSDPNGSLVDDALYIMSVLCGHPEAKAAMANANTLLVLTDVLKMGSSRSKENAAAVLLALCKGDWEKLEWLTRLGAMASLMKLAENGTGRARRKAASLLEQLRKS 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26656113 26661861 - XM_039019736.1 Bhi12g00881 52693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00881 614 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 320 IPR013083 -
Bhi12g00881 614 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 378 420 IPR000225 GO:0005515
Bhi12g00881 614 SUPERFAMILY ARM repeat 338 611 IPR016024 -
Bhi12g00881 614 Gene3D - 337 456 IPR011989 -
Bhi12g00881 614 SMART Ubox_2 242 305 IPR003613 GO:0004842|GO:0016567
Bhi12g00881 614 Pfam U-box domain 239 310 IPR003613 GO:0004842|GO:0016567
Bhi12g00881 614 CDD RING-Ubox_PUB 243 285 IPR045210 -
Bhi12g00881 614 SMART arm_5 449 489 IPR000225 GO:0005515
Bhi12g00881 614 SMART arm_5 367 407 IPR000225 GO:0005515
Bhi12g00881 614 SMART arm_5 408 448 IPR000225 GO:0005515
Bhi12g00881 614 SMART arm_5 490 530 IPR000225 GO:0005515
Bhi12g00881 614 SMART arm_5 531 571 IPR000225 GO:0005515
Bhi12g00881 614 Pfam Armadillo/beta-catenin-like repeat 367 406 IPR000225 GO:0005515
Bhi12g00881 614 Pfam Armadillo/beta-catenin-like repeat 450 488 IPR000225 GO:0005515
Bhi12g00881 614 ProSiteProfiles U-box domain profile. 238 312 IPR003613 GO:0004842|GO:0016567
Bhi12g00881 614 PANTHER U BOX DOMAIN-CONTAINING 11 613 - -
Bhi12g00881 614 SUPERFAMILY RING/U-box 234 312 - -
Bhi12g00881 614 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 11 11 613 - -
Bhi12g00881 614 Coils Coil 129 149 - -
Bhi12g00881 614 Gene3D - 457 614 IPR011989 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00879 Bhi-Chr12:26656113 Bhi12g00881 Bhi-Chr12:26656113 0 dispersed
Bhi12g00880 Bhi-Chr12:26656113 Bhi12g00881 Bhi-Chr12:26656113 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00881 - - cmax:111489474 940.258