Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi12g00912 | AAGGACCTGACCGGCGAAACTACAGTTAGCGCGGCGACAACGACGGTCGACCACAAAGAAATTCCAGAGCTCCGACCCACTCGCTTTTTCAATCTTCTTCTTCATTTCTGTATTTCTCTCTTCTTTAACTCACCGTTAGGGTTTTGAAACTCTGATTTTCCACTCCCTGTAAGTCTAATTTCCTCTTTAAGTTCGTACTGCAATTATTTATATCTCATTATCTTCTCGATTGAGGTCTATTTTCCTCCACGATGGAACACTTTTTGGGTCTTCTTCGAATTCGGGTGCTGCGCGGTATTAATCTCGCTGTTCGTGATTCCCGTAGCAGCGATCCTTATGTTGTCGTCTCAATGGGCGACCAGAGGTTGAAGACCCGCGTGGTGAAAAATAATTGCAATCCTGAATGGAATGATGAGTTGACTCTTTCAATTGCAGATCTGAGGACTCGAATCGGTTTATCAGTGTTTGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATCGAACCATACATCGAGTGTTTGAAGATGGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAGCAGAACAAACAATTTAGCTGATGAGAGCCAATGTGTTTGGCACAAGGGGAAAATTGTACAGAACATGTTCCTGAGGTTGAAGAATGTAGAATGTGGGGAGGTGGCAATTCAACTCGAATGGATTGACGTTCCTGGTGCCAAGGGTTTGCCGGTCGGGGGTACGAGCCACTACTGATTTCTTAGCTGATGCACCAGGTAGCGGTCAAATCCTCTGAAGATAGCTCTGCGCCTGCTCTACTACTAAAGGACCAAAAGACT | 856 | 45.56 | MEHFLGLLRIRVLRGINLAVRDSRSSDPYVVVSMGDQRLKTRVVKNNCNPEWNDELTLSIADLRTRIGLSVFDKDTLTDHDKMGDAEIDIEPYIECLKMGLESLPDGCVVKRVYPSRTNNLADESQCVWHKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPVGGTSHY | 173 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 27444625 | 27450314 | + | XM_039020347.1 | Bhi12g00912 | 52724 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi12g00912 | 173 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
| Bhi12g00912 | 173 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Bhi12g00912 | 173 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Bhi12g00912 | 173 | Gene3D | C2 domain | 5 | 164 | IPR035892 | - | |
| Bhi12g00912 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 10 | 1 | 163 | - | - | |
| Bhi12g00912 | 173 | Pfam | C2 domain | 6 | 92 | IPR000008 | - | |
| Bhi12g00912 | 173 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 1 | 163 | IPR044562 | - | |
| Bhi12g00912 | 173 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 151 | IPR035892 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi12g00912 | Bhi-Chr12:27444625 | Bhi03g00156 | Bhi-Chr3:3899552 | 1.55E-37 | dispersed | |
| Bhi12g00911 | Bhi-Chr12:27444596 | Bhi12g00912 | Bhi-Chr12:27444625 | 9.64E-129 | tandem | |
| Bhi12g00912 | Bhi-Chr12:27444625 | Bhi12g00913 | Bhi-Chr12:27444625 | 9.64E-129 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi12g00912 | - | - | csv:101204404 | 312.383 |