Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00920 CAACTTTTTTTGTTTAGTCTAAATAAAAACAACTTCCTCATTACCTTCTCCCTTCCCTCTCTTTTCACACTTCTTCTTCTTCTTCTTCTTCATCTTCTTCTGCTTGTCTCTCTCTCAAGTTTCCACCATTTTTCTGCAAAAAAGATCAAATTTTTAATCTTCCCCTTCTGCAAAATTCCCTTGCTTTTTTGCCTCCTCTGTATATACCCACCTCACAACAAACACAAAATTCCATCATCCATGGCCGCCAACAAATTCGCCACCATCTTGCACAGAAACTCCAACAAAATCACCCTTATTTTAGTTTATGCTCTTCTTGAATGGGTTCTCATCTTTCTTCTTCTTCTTCAGGGTCTTTTCTCTTACCTGATCGTTAAATTTGCAGAGTGGTTTGGGCTGAAGCGCCCCTGTTTGTGGTGTTCCAGAGTCGATCATGTTTTCGAGCCTGAGAAAAAACATTCTTATAGAGATCTTCTTTGTGAAGGTCATGCCATGGAGATTTCTAATCTGGGTTACTGTTCGAATCATCGGAAACTATCGGAGTTGCGAGATTTGTGCGAGGATTGCTCATCCTCTTCTAAGTCCCATGAGTTCTATCAAATTCCTAAGAGCTTTCCTTTTTTTGGAGATGAGAAGGAGGATTTCAGGAGCTGTTCTTGCTGTGGGGAGACTTTGAAGAGTCGATTGCTTTCCCCTTGTATTTTGATTAAACCGAATTGGGGGGATTTGGATTATACCCAGAAGGGGAATTTGATTTCTGAGGCGGAAACTGATGAAATCCATGTTTCCCAATCGGAAGATGTCATCGGAAACAGAGAAATCTCTGTTGTTTCCGGTGGGGAAGAGGCAGAGAAAAACTCCACTTGCTCTGTTTGTGGTTGTGGGTGTAAAGATTCGGCGGTTCATGAAGATGATGATGATAGAGCTGAAAAAGATGGGGATTTTCTTGAACTGGCTGAAGATCTGACCACTTGTAATCAGAAAACAGTTCAAGTTGGTTGTGAGAAAGAGGATGAATTACCTGAGACTGTTCCTCATCATCTTGAGTTCTACATTGACCGGGGTGATGATCGGCGACTGATTCCGGTTGATTTGATCGACTTTTCGGCCCCTGACGATAACAGAAACAACAACAGCAGCAGCAACATCCTAAGTGAAGTGAAAGATGAGGAACAAGAACAAGAGGATTGTGGGAATGAAGATGTTGTTTTGGATTTTGGTTCCCACTTTGAGAATCAAAGGCATGGTGTGAGTGAAGATTGGGAAGTTATTTCAGGAGAGAGATTGGCAGAGTTTCTCTCCGTTTCTCTAAATGAGAACAAGCAGCAAGTTGCAGAGGTGGAAGCCATGGATTTGGAGGAAGATCCATCAATGGGAGTTGAAAAGGAAGCAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGCTGAGGCTTTCATTGATGAAGCAAGTCAAGCTCCAGCCATTGATGCTCATAAAGAAGAACTTGAAGAATTGGTGGTAGCAACAAGACAGCCAGATTCAGATCTTCAACAAGATATTCCCGACCGCGATCCGATCGATGACATTCAAACTCAAACCGACCTTCCTCTGCATCCCGATGTACAAGAAGATCCTTCCCCAAGTACATCATTGGATGTCGACAATATGCAAGATTCTAACAAAGCTGAGAAGTCCGAGGAAGTTGAGGAAGTTGAGGAAGCTGAGGAAGCTAAGGAAGAGGAAGAGTTCAAGATCTTGTCCGTGGAAACAAATTCACAACCTTCAGACAATCACAAACCGTCGAGTTCTGAGGTCAATGAGAATGAGGAAGAAGATAAAGTTCCTGATACACCCACTTCAATGGATAGTCTCCACCAGCTACACAAGAAGCTGCTATTACTAGACAGAAAAGAATCTGGAACCGAAGAGTCTTTGGACGGAAGTGTCATAAGTGAGACCGAAGGTGGGGATGGAGTGTTGACTCTTGAGAAATTGAAGTCGGCATTGAGAACTGAAAGAAAGGCTTTGAATGCTTTATATGCAGAGCTAGAAGAAGAGAGAAGTGCTTCAGCCATAGCTGCCAACCAGACAATGGCAATGATTAATAGGCTTCAAGAGGAGAAAGCAAGTATGCAAATGGAAGCTTTGCAGTACCAGAGAATGATGGAGGAGCAATCTGAGTATGACCAGGAAGCTTTGCAGCTTTTGAATGAGCTTGTGGTAAAGAGGGAAAAGGAAAAGCAAGAGCTCGAGAAAGAAATCGAAATTTACCGAAAAAAGCTTCAAGATTATGAAGCCAAAGAGAAAATAGCAATGTTAAGGAACAGAAAAGATGGGAGCATCCGAAGTCGAAATTCCTCAGTTTCTTGTAGCAATGCCGATGATAGTGATGGGCTATCTATCGATTTGAACACCGAGGCAAAGAAAGACGAAGATTTCTTTTCTAACCAAGAAACGGAGAATCAAAACACCCCAGCTGAGGCAGTCCTTTATTTGGAGGAAACCTTGGCAAACTTTGAGGAAGAAAGGCTGTCCATTCTAGAGGAACTGAAAATGTTGGAAGAGAAGCTCTTCACCTTGAGTGATGAAGAACAACAATTTGAAGACATTGACCATTATAGTGAACAAAATGGGAATGGCTACCATAAGAACTCAGATTATGCTACGGAAACAAATGGATTCGAAAACGGTCACAATGCCAAGGAAATGAATGGAAAACATTATCCAGAGAGGAGAGTGATGAGCACAAAAGCCAAAAGGCTTCTTCCTCTTTTCGACGATGTAGTCGACGCAGATGTCATTGAAGATGTAACAAACGGAGGGGAACAAGGGTTCGACTCCATTACAATGCAGAAGTCTTTAGACAACAAATTTGAGACTGAATTCAAGAGGGTTGCTGTTGAGGAAGAGGTTGATCACGTCTACGAGAGATTACAAGCACTCGAAGCAGATAGGGAGTTTCTAAAACATTGCATTGGCTCCCTAAGAAAAGGCGACAAAGGCTTAGAGCTTCTCCAAGAAATCTTACAACATCTCCGCGATCTAAGGAATGTCGATCTTCAGTTGAAGAACATGGGAGACGTTGTCATAGCATGATTGCAATCACATCCCCAATCAAAAATCCAAACAACACATCAGGTAATTAAAAAGCCTTATGCATCGTTTGCCTTATTTCGTTTTAAACTCCAAAGATGCATCGTATCGGAAAAAAAAAAAAAAACAAACTGAATGAACTTGGTTCACTTGTTTCCAGTCCTTGGTAAATACATAATGTGGTCCTTTGGAGTTTTAATTGATGCAACAACCAATGATACCAAAACCCAAAACCCGTCAACCCCACATCGTCATCGTCATCGTCTTCATCGACAAAATCAGAAAGCCTCCATATGGTGGAGCCTCCTGATATAGAAAATGTTGGAACAAACCAAAGAACCCCCCCTCCCCCGCTGTCTTATGAGTCAAAGTTGACCCAAATTTTTTTGTGGGTTGTGTCCATGATCATCATCACCTTAAAGGAAGGTGAATGAAGTTGAAATTTGTGTGTAGGACAGTGAGCTGTAGCCAATCTGTCATTTGTTTTTATGTTTTTTTTTTCTTTTTTATTTTGGTGAGGAAATAGCCTGGCTTGCAAAGCTGGAGAGATCAGAGGCAAAGATTCCAGTGCCAGGTGCATATAGCTTAGTTTTGTTTAGGCAGTTTTAGATTTAAGGACAATCTTTTTTTTTTTTTTTTTTCCTTCTTTCATTTCTTTTTTTCTTTTATTTTTTCTGGGAAAGGGGAAAGATTTGGGTAAATAACCCATCTTTTTTGCTTTCTCCATCATCTGCATCATTTCATCAAATGGGGTTTGTTTTTCTTACTATTTGAAGGGCAAAAAATTGAGTTCCTTGTACACTACATCTTTCCATTGTAAAGTATATAAAAGTTGAGTGCTTTGTCTACAA 3923 40.89 MAANKFATILHRNSNKITLILVYALLEWVLIFLLLLQGLFSYLIVKFAEWFGLKRPCLWCSRVDHVFEPEKKHSYRDLLCEGHAMEISNLGYCSNHRKLSELRDLCEDCSSSSKSHEFYQIPKSFPFFGDEKEDFRSCSCCGETLKSRLLSPCILIKPNWGDLDYTQKGNLISEAETDEIHVSQSEDVIGNREISVVSGGEEAEKNSTCSVCGCGCKDSAVHEDDDDRAEKDGDFLELAEDLTTCNQKTVQVGCEKEDELPETVPHHLEFYIDRGDDRRLIPVDLIDFSAPDDNRNNNSSSNILSEVKDEEQEQEDCGNEDVVLDFGSHFENQRHGVSEDWEVISGERLAEFLSVSLNENKQQVAEVEAMDLEEDPSMGVEKEAEKEEEEEEEEAEAFIDEASQAPAIDAHKEELEELVVATRQPDSDLQQDIPDRDPIDDIQTQTDLPLHPDVQEDPSPSTSLDVDNMQDSNKAEKSEEVEEVEEAEEAKEEEEFKILSVETNSQPSDNHKPSSSEVNENEEEDKVPDTPTSMDSLHQLHKKLLLLDRKESGTEESLDGSVISETEGGDGVLTLEKLKSALRTERKALNALYAELEEERSASAIAANQTMAMINRLQEEKASMQMEALQYQRMMEEQSEYDQEALQLLNELVVKREKEKQELEKEIEIYRKKLQDYEAKEKIAMLRNRKDGSIRSRNSSVSCSNADDSDGLSIDLNTEAKKDEDFFSNQETENQNTPAEAVLYLEETLANFEEERLSILEELKMLEEKLFTLSDEEQQFEDIDHYSEQNGNGYHKNSDYATETNGFENGHNAKEMNGKHYPERRVMSTKAKRLLPLFDDVVDADVIEDVTNGGEQGFDSITMQKSLDNKFETEFKRVAVEEEVDHVYERLQALEADREFLKHCIGSLRKGDKGLELLQEILQHLRDLRNVDLQLKNMGDVVIA 944
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27684719 27688925 + XM_039050978.1 Bhi12g00920 52732

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00920 944 Coils Coil 470 504 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 384 399 - -
Bhi12g00920 944 Coils Coil 749 769 - -
Bhi12g00920 944 ProSiteProfiles GTD-binding domain profile. 573 671 IPR007656 -
Bhi12g00920 944 Coils Coil 381 405 - -
Bhi12g00920 944 Coils Coil 575 602 - -
Bhi12g00920 944 Coils Coil 607 680 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 695 712 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 406 421 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 694 713 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 292 316 - -
Bhi12g00920 944 PANTHER MYOSIN-BINDING PROTEIN 2 1 940 IPR039306 GO:0017022
Bhi12g00920 944 MobiDBLite consensus disorder prediction 500 514 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 369 534 - -
Bhi12g00920 944 PANTHER MYOSIN-BINDING PROTEIN 3 1 940 - -
Bhi12g00920 944 MobiDBLite consensus disorder prediction 515 531 - -
Bhi12g00920 944 Coils Coil 877 897 - -
Bhi12g00920 944 Pfam Zein-binding 577 667 IPR007656 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00920 - - - csv:101220314 1520.37
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00919 Bhi-Chr12:27684719 Bhi12g00920 Bhi-Chr12:27684719 0 tandem
Bhi12g00920 Bhi-Chr12:27684719 Bhi12g00921 Bhi-Chr12:27684720 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g461 . . . . . . . . . . . . . . . . Cpe01g01841 . . . . . . . . . . . . . . . . Cone6ag0387 Cone9ag0414 . Csa05g02013 . . . Blo11g00974 . . . . . . . . Cmo15g01004 . Cma15g00963 . Car15g00909 Cpe13g00361 . Bhi12g00920 . . . . . . Cla01g00620 Cam01g0648 Cec01g0640 Cco01g0666 Clacu01g0636 Cmu01g0609 Cre09g1892 Lsi09g00670 . Chy09g00840 Cme09g01372
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006446 1 3 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 2 1 1 1 1 2 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00920 Bhi_Chr12 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0