Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00925 AATAATATCAACACACTTGTGCACAAAGAAACAAACTCCATTCTTAATAATAAGTCATTACCATGAAAATGCTGCATTGTCTTCTTCTCTTTTCATTACTATTTATGATCATCCATGGCAAAAGCTTCAATAATTTCATGTCTTGCTCCCAAACCCCATATCCAGACCTCTGCTTCCATTACATAAACCCAAACGACAACGTATTGACTGCCGATATTGACGAAACTTCTGTCATCACCCGCTATCAAAACTTGACCATTCGAGCCACTTTGAACCAAGCCATGGTGGTCCATGACCATCTTCGCTTCGCCATGGATCTTGATTCATTTGATGATGATGACAGGACTAAATTCGCTTTAATCGACTGTTTGGAACTCTATGAGGATTCGATCACCGAGCTCAATCGTTTGGCAATGAGCTCCATGAGTGTCAACTCCTCGATTGACCACTTGACGCTGCTAAGCGCTTCATTAGCCAACCATCAAACATGCCAAGATGGATTTCGAGATTTCGGATTATTTTCGTTTGATGATCCATTTCAAATTTTGAGTAACTTCTCAAAATTGGTCAGCAATTCTCTTGCCATCACAAAGGCCGCTGTGGCGGTGCCCCCCACTAGTTCCTCCACCTCCGGTGGCAGGCGGTTGCTAGGTGGCTCATTTCCTCAGTGGATTTACGATGTTGATAGGATTCTCCTTCAGGGCACGGTCGGAAATCGTGCGGATATGGTGGTGGCACAAGATGGAAGCGGGGATTTTAGGACAATATCGGAGGCGGTGACAGCGGCGGAGGATGCGACAAAGGGATGTCGAAGGTTTGTTATATATGTAAAAGGTGGGATTTACAAAGAGAATGTTGTGATTAAGAAGGGGATGAAGAATGTAATGATGATTGGAGATGGAATGGATAGGACGATCGTCACAGCCATGAAAAATGTCCAAGATGGATCAACAACTTTCCAATCAGCCACTTTTGCGGTGGCCGGTGAAGGGTTCATCGCCAAAGACATGACGTTTGAGAACACGGCGGGGCCAGAGAAACACCAAGCCGTTGCACTCCGATCTAATGCCGATCGGTCAATTTTCTACCGATGCAGCTTTAAAGGCTACCAAGATACTCTATACGCCCACTCCAACCGCCAATTCTACCGTGAATGCCACATTTACGGAACTGTCGACTTCATTTTCGGCGACGCTGTTGCCGTTTTTCAAAACTGCAACATCTTCGTCAGAAAGCCGATGATGAACCAGAAAAACACCATCACGGCGCATGCGAGGTCCGACCCAAATGAGAACACGGGATTCGTAATCCACAATTCCGTCATTCAGGCGGCGCCGGACTTGAAGCCGGTGGAGGGTTTGTACGGAACTTATTTGGGGAGACCGTGGAAGCCGTATTCGAGGACGGTGATAATGAAGAGCTTTTTGGACGGTCTGATTGAACCGGCCGGGTGGCTTCCTTGGGCCGGAGATTTCGGTCTGAGGACGGTTTATTATGGGGAGTTTATGAACACAGGTGGTGGAGCATATACGAAAGGGAGGGTCCAGTGGCCGGGATACCATGTGATGACGAGTGCGGCGGAGGCGGAGAGATTTACGGTGGAAAGTTTCCTTGAAGGAGGAAGTTGGATTCCGGCCACCGGAGTGCCATTTGCAAATGGGCTATGATTATGATATTAAACTTATCCAAGTATAGATAAGAAAAAAAAGAAAGAAAGATACGCACCAGTCAAAATAGTAGCTTCTGCTGACTTTTTGATAGTGTAGTGGTGTATTTTAAGTGGTTAAAAAATTATACAGAAATTTGAATGCGGTAGAAATAGGAAAAATAAAATTGTAAAAATACATCATATCCAAAAGTTTGTAAGAGGTTCCCAATTCCATGACCAGTGTATACTATAGACAAACACTCAGATATAAGAAAACAGCCCAAATAGGAGAAAAGTGGGGTGGGGTAAAATGTTGGGTAACTGATGTTAGGATTTGTTTGAGAGAAAGGTTGGGTATATAGCTTATTATAGTTGAAAGACTTTTATGGTTGGGTATATAGCTTATTATAGTTGAAAGATTTCTATACCTTGATAATAATAGTAAAGAGAAAATATATGAAAGACTATTTTCTTTTCTTTTCTTTTCTTTTCTAAGATCCTAACATGAAAGACTTAATTCTACTCTAATATCATTTAAAAAAAAAAAAAAAAAAACACTTTATCTTGTTCAATCAATGTAGGATGTAGATTTACCTTAAAAGTGTAATAAAAATCCGGAAAAAAATGTGCCTATGTAAAGTTTAAAATAAATATAATTTTTTGAAAAAAAGAATAATAATAGTTAAATAATTATTTATTCGAGATCCCAACACTAACATAGAATGAATGAAATTACCGCAACAAAATACAATAAGCACAAAGTTTAGTAGAGACTACCCGACTCTCTTTTTTCACGAGAAAACCAAAGAAGTATATGTTGACTTTGACTCTGCAGCTCTTTCTATTTAATTTCAGTCTGCAGCTCTTTCTATTTAATTTCAGTAGCAAATTAAATAAATTGTAAGGACTGGAGAATGAGTGAGTACAGTTCCACACTCAAAAGTGAGGCCTCCTGATTTCAGTTCGACTCTTATGGACAGAATCATATACTAAAAAATTTCCTTTGATTACTTTATTTAAACGAACCGCATTAAAAGTCCTTTAAAAACACAACTATTCCAAATGCAATTTCCCAATCAAAGCTCTGAGATTGTCATTCGGGTTT 2753 40.25 MKMLHCLLLFSLLFMIIHGKSFNNFMSCSQTPYPDLCFHYINPNDNVLTADIDETSVITRYQNLTIRATLNQAMVVHDHLRFAMDLDSFDDDDRTKFALIDCLELYEDSITELNRLAMSSMSVNSSIDHLTLLSASLANHQTCQDGFRDFGLFSFDDPFQILSNFSKLVSNSLAITKAAVAVPPTSSSTSGGRRLLGGSFPQWIYDVDRILLQGTVGNRADMVVAQDGSGDFRTISEAVTAAEDATKGCRRFVIYVKGGIYKENVVIKKGMKNVMMIGDGMDRTIVTAMKNVQDGSTTFQSATFAVAGEGFIAKDMTFENTAGPEKHQAVALRSNADRSIFYRCSFKGYQDTLYAHSNRQFYRECHIYGTVDFIFGDAVAVFQNCNIFVRKPMMNQKNTITAHARSDPNENTGFVIHNSVIQAAPDLKPVEGLYGTYLGRPWKPYSRTVIMKSFLDGLIEPAGWLPWAGDFGLRTVYYGEFMNTGGGAYTKGRVQWPGYHVMTSAAEAERFTVESFLEGGSWIPATGVPFANGL 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27823274 27826363 - XM_039050632.1 Bhi12g00925 52737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00925 534 Gene3D - 217 534 IPR012334 -
Bhi12g00925 534 Pfam Pectinesterase 221 519 IPR000070 GO:0030599|GO:0042545
Bhi12g00925 534 ProSitePatterns Pectinesterase signature 2. 367 376 IPR033131 -
Bhi12g00925 534 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 178 IPR035513 -
Bhi12g00925 534 PANTHER PECTINESTERASE 21 533 - -
Bhi12g00925 534 TIGRFAM PME_inhib: pectinesterase inhibitor domain 1 177 IPR006501 GO:0004857
Bhi12g00925 534 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 177 IPR035513 -
Bhi12g00925 534 SUPERFAMILY Pectin lyase-like 219 532 IPR011050 -
Bhi12g00925 534 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 21 533 - -
Bhi12g00925 534 ProSitePatterns Pectinesterase signature 1. 248 267 IPR018040 -
Bhi12g00925 534 CDD PMEI-like_3 27 178 - -
Bhi12g00925 534 Pfam Plant invertase/pectin methylesterase inhibitor 27 175 IPR006501 GO:0004857
Bhi12g00925 534 SMART PMEI_2 17 175 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00014 Bhi-Chr12:343394 Bhi12g00925 Bhi-Chr12:27823274 2.55E-168 dispersed
Bhi12g00634 Bhi-Chr12:19483377 Bhi12g00925 Bhi-Chr12:27823274 2.80E-148 dispersed
Bhi12g00925 Bhi-Chr12:27823274 Bhi09g00262 Bhi-Chr9:5502512 9.14E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00925 - K01051 csv:101219120 860.907