Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00934 TTGTAAAGTTAAGCTCTAACGGGGCTTAAAGAAAGTAAATTACCAATCTCCTTTTCCGATAATCGTCTTCTCCACCTAAATTCTCTCTGCAAAATCCCTCTCTCTTTCGACATGTCGGGAAGTGAAAAACGACTTCCTTTCTCTTTCTTTCTGATATTTCTGTACGGAGCCACCGCAATTCTGACACCTCCTTCATCCTCCGCTTCCTTAGACACCTTCGTCTTCGGCGGCTGCACGGTCCAAAAATACATTCCCAATTCACCCTACGATTCCAATCTCAACTTACTCCTTAGCCGCCTCGTCGCCGCCGCCACTTCCGCCGCCTACGGCAACTTCACTGTCATCGGCTCCGCCCCACAAGACACCATCTACGGCCTCTACCAATGCCGGGGAGACCTCAACTCCGGTGACTGCTCTCAGTGCATTGCCGGAGCGGTGAGCCGTCTCGGGACCATCTGCAGCGACGCGTGCGGCGGCGCGTTGCAGTTGGAGGGGTGTTTCGTCAAGTACGACAACAAAAGCTTCTTTGGAGTAGAGGATAAGACGGTTGTGGTGAAGAAATGTGGGCCGTCGATTGGGTCTGACGTGGACACGTTGACTGGGCTTGATGCTGCGCTGGCGTATTTGGTTAGCAGCGGTGGGACCTACAAAACAGGTGGGTCCGGAGATGTACGGACTGTGGCTCAGTGCGTTGGGGATTTGAGTGTGAGCGAGTGTCAGGATTGCATCTCTGACGCCATCGGACAGCTCAAATCCGCTTGTGGGCCTTCCGCTTGGGGGGATTTGTTTTTGGCTAAATGCTACGCGCGCTTTACTAGAGGTGCAGCCCACGCGCAAGATAATGGAAATGGGTTAGGATTTGGAAATGCAAATGCTAATGGAAATGGAAATAACTCAAAGGACAATGACAATGAGACGAACAAGACATTAGCAATAATTATTGGACTCATTGCAGCGGTTGCCTTGCTCATCTTATTCATCACTTACCTCAACAAAAAATGTGAAAAGGGAAAAGGTTGTGGCCAAATCTGTAATTTCACAGCTTTCTGGGTATAATTTTCTCTCTATACTTTGATTTTTGTTGGTCTGAAAAAATAAAAGAGTTTAATTAAAAGAAAGTGTATGCAAGAAGAAGGAAGGGGCCTCAGCAGAAGCAAAGACAAGAAGATTCAACAGAGAATTATAAGAAGAAGAAGAAAGAAAAAAGAAAGCTACAACATTTTCCCACTTGATTTTTCAGCCTCTCTTTCCATATTTGCTTTTATGTTATAATATTGATGTTGTATATATGTATAACTTAGGTCTTCACCAATATTTCTTACAAATTTTTTTAAAAA 1337 45.47 MSGSEKRLPFSFFLIFLYGATAILTPPSSSASLDTFVFGGCTVQKYIPNSPYDSNLNLLLSRLVAAATSAAYGNFTVIGSAPQDTIYGLYQCRGDLNSGDCSQCIAGAVSRLGTICSDACGGALQLEGCFVKYDNKSFFGVEDKTVVVKKCGPSIGSDVDTLTGLDAALAYLVSSGGTYKTGGSGDVRTVAQCVGDLSVSECQDCISDAIGQLKSACGPSAWGDLFLAKCYARFTRGAAHAQDNGNGLGFGNANANGNGNNSKDNDNETNKTLAIIIGLIAAVALLILFITYLNKKCEKGKGCGQICNFTAFWV 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28276985 28280557 - XM_039050990.1 Bhi12g00934 52746

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00934 314 PANTHER - 1 300 - -
Bhi12g00934 314 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Bhi12g00934 314 Pfam Salt stress response/antifungal 179 235 IPR002902 -
Bhi12g00934 314 ProSiteProfiles Gnk2-homologous domain profile. 139 239 IPR002902 -
Bhi12g00934 314 Gene3D - 33 138 IPR038408 -
Bhi12g00934 314 Gene3D - 159 237 IPR038408 -
Bhi12g00934 314 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Bhi12g00934 314 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 1 300 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00934 - - - bhj:120092785 576.63
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bhi07g00378 Bhi12g00934 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00934 Bhi-Chr12:28276985 Bhi12g01263 Bhi-Chr12:38059194 1.20E-99 dispersed
Bhi12g00934 Bhi-Chr12:28276985 Bhi12g00935 Bhi-Chr12:28276985 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g484 . . Bda01g01801 . Bpe13g01013 . . . Cmo04g01095 . Cma04g01018 . Car04g00953 Car04g00067 Sed06g0165 . Cpe01g01834 Bhi07g00378 Tan04g1527 Cmetu10g0773 Lac13g1367 Hepe01g0572 . . Cla07g00560 Cam07g0588 Cec07g0655 Cco07g0624 Clacu07g0591 Cmu07g0626 Cre07g0966 . . Cone6ag0373 Cone9ag0402 Lsi04g01110 . . Cme10g01607 . Blo11g00970 Bda07g01755 . . . Bma01g00483 . . . Cmo15g01022 . Cma15g00975 . Car15g00921 Cpe13g00352 . Bhi12g00934 . . . . . . Cla01g00633 Cam01g0661 Cec01g0653 Cco01g0679 Clacu01g0649 Cmu01g0623 Cre09g1881 Lsi09g00682 Csa05g01000 Chy09g00509 Cme09g01349
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010553 1 2 0 0 1 1 2 1 1 1 1 1 2 1 1 2 1 0 2 1 1 1 1 1 1 1 1 2 1 0 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi12g00934 Bhi_Chr12 FPKM 25.342136 27.770504 18.627295 19.620264 10.592662 9.041927 11.065538 35.148067 35.944275 40.362961