Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi12g00944 | ACTCAATAAGAAACAAAAAAACGGACTGAGACGGGGGAGAAGAACTAGGCAGCCTTGTACGGAACTCGTAATTTGGGATTGAATTTTTGCAACGAAGGAAGGGAACAATGGACATCAGACTCCCATGGAATGGAATGGATGATGATTCTTCCATTACTTTCTAGACCGACAAACCAGCTGAAGAAGAAGATTTTCCTTCTCAATCTATAACCCCATCTCCTTCAATCAATTCCGACTTTCTCCCACCCACTCTCCTTCTCGCCGCCGGCGCCGATCATGTCTTCCCCATCCTTCCCTCCTTCCATGGACCCTCCCGCCCAACAGATCCCTCTCTTACCCTCTCGTCAGCCCTCCAACTCTGACGGCTCCACTTCCCCCATCGGCCCCCTCGCCCTTCTCTTGGGTCGCGCCACTGGCCGCCGTGGAACTTCTATGCTGGTTCGGGAGACGGCAGCTCGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTATTCTAAGCCTGTGGTAGCCCTTGACATTATGTGGAATTTAACTTTCGTTTTCGTTTCGCTGGGTGTGCTTATTCACTCCGCTGATGAAAAACCCAATACGCCAATTCGCCTTTGGATTGTAGTTTATGCGGCTCAGTGCTTGCTGCACACCGTGCTTGTGTGGTTTGAGTTCAGAAGGAGAAATGCGAGGAGGGCTAGGGATATGGAGACGCAGCAACAGCAGCAGCCTGACGGATATGTAACTAATGAAAGCGATGATGAAGATGGTAGCCACAGGAATCTGTCCGGGCTCGCTGTCGTATTCCTGGCATTTGATGTGTTCTTTGCCGTCTTTTGTGTTGTTTTGGCATGTTTTATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACAGATGCTGATTTAAGTTTGCTTCCTAAGTATAGATATCAAGTGTCCAATGAGCCTTCTCCGGGGGATGGGTTGATGATTCCAGTAGAGACTAGCAGTAGATACTTGACGACTGAGCGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGTCTTAGTCAATACGAGGACGGAGCCGAGCTTCATGCTCTTCCCTGCAATCACCATTTTCATTATGCGTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAGTACAACATTCTAAAAAATAGTGAACCCGTGTAATGCTGAAGATGAAACGATGCAGTGAGTTCCTGGTATGTTTGCCGTCCTTGTACATATAAATCAGATAGTGATCCTGCTGCATTGTGGTTGAAACATGTTACACTTTTTTTTTTCTTTTTGTCTTTTTTGATGGGGGGGAGTAATTAGTTCTCTAGGCCGTTGAAATTGTGTTCATGCTGGTCGATATCTGTTGTACTTAATCAGTCGACTCGTTTGATCTGTAGCAACAATTATGAATGTCTTTCCGGTCAATGTGCTCAGAATAACATTTATTATTCAACTTCTACCA | 1513 | 46.4 | MSSPSFPPSMDPPAQQIPLLPSRQPSNSDGSTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDIMWNLTFVFVSLGVLIHSADEKPNTPIRLWIVVYAAQCLLHTVLVWFEFRRRNARRARDMETQQQQQPDGYVTNESDDEDGSHRNLSGLAVVFLAFDVFFAVFCVVLACFIGIALCCCLPCIIAILYAVAGQEGATDADLSLLPKYRYQVSNEPSPGDGLMIPVETSSRYLTTERVLLREDAECCICLSQYEDGAELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNSEPV | 315 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 28521866 | 28532029 | - | XM_039018825.1 | Bhi12g00944 | 52756 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi12g00944 | 315 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Bhi12g00944 | 315 | Pfam | Ring finger domain | 263 | 305 | IPR001841 | - | |
Bhi12g00944 | 315 | MobiDBLite | consensus disorder prediction | 138 | 159 | - | - | |
Bhi12g00944 | 315 | CDD | RING-H2_RNF111_like | 263 | 307 | - | - | |
Bhi12g00944 | 315 | ProSiteProfiles | Zinc finger RING-type profile. | 264 | 305 | IPR001841 | - | |
Bhi12g00944 | 315 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bhi12g00944 | 315 | SUPERFAMILY | RING/U-box | 250 | 310 | - | - | |
Bhi12g00944 | 315 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 244 | 313 | IPR013083 | - | |
Bhi12g00944 | 315 | PANTHER | TARGET OF ERK KINASE MPK-1 | 15 | 160 | - | - | |
Bhi12g00944 | 315 | PANTHER | TARGET OF ERK KINASE MPK-1 | 166 | 312 | - | - | |
Bhi12g00944 | 315 | SMART | ring_2 | 264 | 304 | IPR001841 | - | |
Bhi12g00944 | 315 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE | 166 | 312 | - | - | |
Bhi12g00944 | 315 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE | 15 | 160 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi12g00944 | Bhi-Chr12:28521866 | Bhi12g00946 | Bhi-Chr12:28521866 | 0 | dispersed | |
Bhi12g00944 | Bhi-Chr12:28521866 | Bhi12g00945 | Bhi-Chr12:28521866 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi12g00944 | - | - | cmo:103504433 | 520.39 |