Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi12g00944 ACTCAATAAGAAACAAAAAAACGGACTGAGACGGGGGAGAAGAACTAGGCAGCCTTGTACGGAACTCGTAATTTGGGATTGAATTTTTGCAACGAAGGAAGGGAACAATGGACATCAGACTCCCATGGAATGGAATGGATGATGATTCTTCCATTACTTTCTAGACCGACAAACCAGCTGAAGAAGAAGATTTTCCTTCTCAATCTATAACCCCATCTCCTTCAATCAATTCCGACTTTCTCCCACCCACTCTCCTTCTCGCCGCCGGCGCCGATCATGTCTTCCCCATCCTTCCCTCCTTCCATGGACCCTCCCGCCCAACAGATCCCTCTCTTACCCTCTCGTCAGCCCTCCAACTCTGACGGCTCCACTTCCCCCATCGGCCCCCTCGCCCTTCTCTTGGGTCGCGCCACTGGCCGCCGTGGAACTTCTATGCTGGTTCGGGAGACGGCAGCTCGTGAACTTGAAGAGCGCCGCATCGATTGGGGCTATTCTAAGCCTGTGGTAGCCCTTGACATTATGTGGAATTTAACTTTCGTTTTCGTTTCGCTGGGTGTGCTTATTCACTCCGCTGATGAAAAACCCAATACGCCAATTCGCCTTTGGATTGTAGTTTATGCGGCTCAGTGCTTGCTGCACACCGTGCTTGTGTGGTTTGAGTTCAGAAGGAGAAATGCGAGGAGGGCTAGGGATATGGAGACGCAGCAACAGCAGCAGCCTGACGGATATGTAACTAATGAAAGCGATGATGAAGATGGTAGCCACAGGAATCTGTCCGGGCTCGCTGTCGTATTCCTGGCATTTGATGTGTTCTTTGCCGTCTTTTGTGTTGTTTTGGCATGTTTTATTGGAATTGCTCTCTGTTGCTGCTTGCCTTGCATTATAGCTATTCTTTATGCTGTTGCAGGCCAGGAAGGTGCAACAGATGCTGATTTAAGTTTGCTTCCTAAGTATAGATATCAAGTGTCCAATGAGCCTTCTCCGGGGGATGGGTTGATGATTCCAGTAGAGACTAGCAGTAGATACTTGACGACTGAGCGTGTTCTATTACGCGAGGATGCGGAGTGCTGTATATGTCTTAGTCAATACGAGGACGGAGCCGAGCTTCATGCTCTTCCCTGCAATCACCATTTTCATTATGCGTGTATCACAAAATGGCTGAAGATGAATGCAACATGTCCTCTGTGCAAGTACAACATTCTAAAAAATAGTGAACCCGTGTAATGCTGAAGATGAAACGATGCAGTGAGTTCCTGGTATGTTTGCCGTCCTTGTACATATAAATCAGATAGTGATCCTGCTGCATTGTGGTTGAAACATGTTACACTTTTTTTTTTCTTTTTGTCTTTTTTGATGGGGGGGAGTAATTAGTTCTCTAGGCCGTTGAAATTGTGTTCATGCTGGTCGATATCTGTTGTACTTAATCAGTCGACTCGTTTGATCTGTAGCAACAATTATGAATGTCTTTCCGGTCAATGTGCTCAGAATAACATTTATTATTCAACTTCTACCA 1513 46.4 MSSPSFPPSMDPPAQQIPLLPSRQPSNSDGSTSPIGPLALLLGRATGRRGTSMLVRETAARELEERRIDWGYSKPVVALDIMWNLTFVFVSLGVLIHSADEKPNTPIRLWIVVYAAQCLLHTVLVWFEFRRRNARRARDMETQQQQQPDGYVTNESDDEDGSHRNLSGLAVVFLAFDVFFAVFCVVLACFIGIALCCCLPCIIAILYAVAGQEGATDADLSLLPKYRYQVSNEPSPGDGLMIPVETSSRYLTTERVLLREDAECCICLSQYEDGAELHALPCNHHFHYACITKWLKMNATCPLCKYNILKNSEPV 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28521866 28532029 - XM_039018825.1 Bhi12g00944 52756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi12g00944 315 MobiDBLite consensus disorder prediction 1 19 - -
Bhi12g00944 315 Pfam Ring finger domain 263 305 IPR001841 -
Bhi12g00944 315 MobiDBLite consensus disorder prediction 138 159 - -
Bhi12g00944 315 CDD RING-H2_RNF111_like 263 307 - -
Bhi12g00944 315 ProSiteProfiles Zinc finger RING-type profile. 264 305 IPR001841 -
Bhi12g00944 315 MobiDBLite consensus disorder prediction 1 32 - -
Bhi12g00944 315 SUPERFAMILY RING/U-box 250 310 - -
Bhi12g00944 315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 313 IPR013083 -
Bhi12g00944 315 PANTHER TARGET OF ERK KINASE MPK-1 15 160 - -
Bhi12g00944 315 PANTHER TARGET OF ERK KINASE MPK-1 166 312 - -
Bhi12g00944 315 SMART ring_2 264 304 IPR001841 -
Bhi12g00944 315 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 166 312 - -
Bhi12g00944 315 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 15 160 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi12g00944 Bhi-Chr12:28521866 Bhi12g00946 Bhi-Chr12:28521866 0 dispersed
Bhi12g00944 Bhi-Chr12:28521866 Bhi12g00945 Bhi-Chr12:28521866 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi12g00944 - - cmo:103504433 520.39